Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 AC131055.1-201ENST00000584626 316 ntBASIC1.49□□□□□ -2.17
HDAC9Q9UKV0 MIR6767-201ENST00000637302 66 ntBASIC1.49□□□□□ -2.17
HDAC9Q9UKV0 MTND5P32-201ENST00000560711 1802 ntBASIC1.49□□□□□ -2.17
HDAC9Q9UKV0 Y_RNA.400-201ENST00000383963 111 ntBASIC1.48□□□□□ -2.17
HDAC9Q9UKV0 Y_RNA.506-201ENST00000384494 102 ntBASIC1.48□□□□□ -2.17
HDAC9Q9UKV0 MIR758-201ENST00000390227 88 ntBASIC1.48□□□□□ -2.17
HDAC9Q9UKV0 AL133373.1-201ENST00000497098 94 ntBASIC1.48□□□□□ -2.17
HDAC9Q9UKV0 SNORA31.4-201ENST00000516049 129 ntBASIC1.48□□□□□ -2.17
HDAC9Q9UKV0 RNU6-113P-201ENST00000516653 101 ntBASIC1.48□□□□□ -2.17
HDAC9Q9UKV0 RNU2-60P-201ENST00000517290 128 ntBASIC1.48□□□□□ -2.17
HDAC9Q9UKV0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.48□□□□□ -2.17
HDAC9Q9UKV0 MIR7974-201ENST00000615835 79 ntBASIC1.48□□□□□ -2.17
HDAC9Q9UKV0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
HDAC9Q9UKV0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
HDAC9Q9UKV0 SNORA70.7-201ENST00000384159 133 ntBASIC1.47□□□□□ -2.17
HDAC9Q9UKV0 MIR150-201ENST00000385048 84 ntBASIC1.47□□□□□ -2.17
HDAC9Q9UKV0 MIR1302-7-201ENST00000408841 72 ntBASIC1.47□□□□□ -2.17
HDAC9Q9UKV0 AC245047.7-201ENST00000440265 293 ntBASIC1.47□□□□□ -2.17
HDAC9Q9UKV0 RNU7-73P-201ENST00000458743 63 ntBASIC1.47□□□□□ -2.17
HDAC9Q9UKV0 AC087343.1-201ENST00000477341 475 ntBASIC1.47□□□□□ -2.17
HDAC9Q9UKV0 AC048334.1-201ENST00000477975 159 ntBASIC1.47□□□□□ -2.17
HDAC9Q9UKV0 RNA5SP236-201ENST00000516169 116 ntBASIC1.47□□□□□ -2.17
HDAC9Q9UKV0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.46□□□□□ -2.18
HDAC9Q9UKV0 RNA5SP327-201ENST00000362494 101 ntBASIC1.46□□□□□ -2.18
HDAC9Q9UKV0 Y_RNA.351-201ENST00000365436 96 ntBASIC1.46□□□□□ -2.18
HDAC9Q9UKV0 RNY1P5-201ENST00000383890 115 ntBASIC1.46□□□□□ -2.18
HDAC9Q9UKV0 RNU6-913P-201ENST00000390913 95 ntBASIC1.46□□□□□ -2.18
HDAC9Q9UKV0 AL035398.1-201ENST00000430869 322 ntBASIC1.46□□□□□ -2.18
HDAC9Q9UKV0 RNU7-67P-201ENST00000459003 62 ntBASIC1.46□□□□□ -2.18
HDAC9Q9UKV0 RNU6-958P-201ENST00000516995 106 ntBASIC1.46□□□□□ -2.18
HDAC9Q9UKV0 MIR5000-201ENST00000577717 103 ntBASIC1.46□□□□□ -2.18
HDAC9Q9UKV0 MIR548AO-201ENST00000579992 96 ntBASIC1.46□□□□□ -2.18
HDAC9Q9UKV0 MIR4295-201ENST00000585286 85 ntBASIC1.46□□□□□ -2.18
HDAC9Q9UKV0 PRELID3BP2-201ENST00000605362 201 ntBASIC1.46□□□□□ -2.18
HDAC9Q9UKV0 AC091932.4-201ENST00000623386 200 ntBASIC1.46□□□□□ -2.18
HDAC9Q9UKV0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.46□□□□□ -2.18
HDAC9Q9UKV0 SNORA25.3-201ENST00000363205 127 ntBASIC1.45□□□□□ -2.18
HDAC9Q9UKV0 Y_RNA.215-201ENST00000364204 112 ntBASIC1.45□□□□□ -2.18
HDAC9Q9UKV0 RNU6-939P-201ENST00000384634 107 ntBASIC1.45□□□□□ -2.18
HDAC9Q9UKV0 AL392103.1-201ENST00000447000 198 ntBASIC1.45□□□□□ -2.18
HDAC9Q9UKV0 RNU2-11P-201ENST00000459191 187 ntBASIC1.45□□□□□ -2.18
HDAC9Q9UKV0 snoU13.16-201ENST00000459350 104 ntBASIC1.45□□□□□ -2.18
HDAC9Q9UKV0 RPS23P4-201ENST00000487908 423 ntBASIC1.45□□□□□ -2.18
HDAC9Q9UKV0 SNORA31.2-201ENST00000516019 134 ntBASIC1.45□□□□□ -2.18
HDAC9Q9UKV0 AC068338.1-201ENST00000565567 176 ntBASIC1.45□□□□□ -2.18
HDAC9Q9UKV0 MIR548X2-201ENST00000579776 100 ntBASIC1.45□□□□□ -2.18
HDAC9Q9UKV0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
HDAC9Q9UKV0 MIR569-201ENST00000385228 96 ntBASIC1.44□□□□□ -2.18
HDAC9Q9UKV0 Y_RNA.584-201ENST00000391090 114 ntBASIC1.44□□□□□ -2.18
HDAC9Q9UKV0 MIR1185-1-201ENST00000408598 86 ntBASIC1.44□□□□□ -2.18
HDAC9Q9UKV0 RNU7-80P-201ENST00000459562 61 ntBASIC1.44□□□□□ -2.18
HDAC9Q9UKV0 RNU7-53P-201ENST00000516705 60 ntBASIC1.44□□□□□ -2.18
HDAC9Q9UKV0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HDAC9Q9UKV0 RNA5SP264-201ENST00000363115 107 ntBASIC1.43□□□□□ -2.18
HDAC9Q9UKV0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.43□□□□□ -2.18
HDAC9Q9UKV0 SNORA25.12-201ENST00000516202 82 ntBASIC1.43□□□□□ -2.18
HDAC9Q9UKV0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.43□□□□□ -2.18
HDAC9Q9UKV0 MIR342-201ENST00000362212 99 ntBASIC1.42□□□□□ -2.18
HDAC9Q9UKV0 Y_RNA.454-201ENST00000384224 113 ntBASIC1.42□□□□□ -2.18
HDAC9Q9UKV0 RNU6-125P-201ENST00000384505 107 ntBASIC1.42□□□□□ -2.18
HDAC9Q9UKV0 RNU6-460P-201ENST00000391158 108 ntBASIC1.42□□□□□ -2.18
HDAC9Q9UKV0 Y_RNA.686-201ENST00000516548 134 ntBASIC1.42□□□□□ -2.18
HDAC9Q9UKV0 AL020996.3-201ENST00000606617 222 ntBASIC1.42□□□□□ -2.18
HDAC9Q9UKV0 MIR8055-201ENST00000610739 97 ntBASIC1.42□□□□□ -2.18
HDAC9Q9UKV0 Y_RNA.120-201ENST00000363304 110 ntBASIC1.41□□□□□ -2.18
HDAC9Q9UKV0 MIR513C-201ENST00000401352 84 ntBASIC1.41□□□□□ -2.18
HDAC9Q9UKV0 RNU6-1190P-201ENST00000410811 104 ntBASIC1.41□□□□□ -2.18
HDAC9Q9UKV0 AC090844.1-201ENST00000422019 156 ntBASIC1.41□□□□□ -2.18
HDAC9Q9UKV0 RNU6-346P-201ENST00000516288 111 ntBASIC1.41□□□□□ -2.18
HDAC9Q9UKV0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.41□□□□□ -2.18
HDAC9Q9UKV0 AL596211.1-201ENST00000569873 2277 ntBASIC1.41□□□□□ -2.18
HDAC9Q9UKV0 MIR103A2-201ENST00000362154 78 ntBASIC1.4□□□□□ -2.19
HDAC9Q9UKV0 RNU1-133P-201ENST00000364867 167 ntBASIC1.4□□□□□ -2.19
HDAC9Q9UKV0 Y_RNA.488-201ENST00000384403 102 ntBASIC1.4□□□□□ -2.19
HDAC9Q9UKV0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
HDAC9Q9UKV0 SNORA26.6-201ENST00000391256 115 ntBASIC1.4□□□□□ -2.19
HDAC9Q9UKV0 RNU7-40P-201ENST00000516397 64 ntBASIC1.4□□□□□ -2.19
HDAC9Q9UKV0 AC027335.2-201ENST00000624030 375 ntBASIC1.4□□□□□ -2.19
HDAC9Q9UKV0 SNORA25-201ENST00000384384 134 ntBASIC1.39□□□□□ -2.19
HDAC9Q9UKV0 HMGN1P33-201ENST00000432945 451 ntBASIC1.39□□□□□ -2.19
HDAC9Q9UKV0 RNU7-45P-201ENST00000459460 63 ntBASIC1.39□□□□□ -2.19
HDAC9Q9UKV0 RNU6-426P-201ENST00000516464 97 ntBASIC1.39□□□□□ -2.19
HDAC9Q9UKV0 Z97988.1-201ENST00000637697 135 ntBASIC1.39□□□□□ -2.19
HDAC9Q9UKV0 Y_RNA.68-201ENST00000362881 102 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 RNU6-508P-201ENST00000363231 103 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 RNU1-124P-201ENST00000363861 145 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 Y_RNA.420-201ENST00000384043 110 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 RNU6-746P-201ENST00000384112 109 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 MIR193B-201ENST00000384907 83 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 RNU6-910P-201ENST00000390844 107 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 SNORA75.2-201ENST00000391138 150 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 SNORA75.3-201ENST00000391231 150 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 AL603914.1-201ENST00000401964 204 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 Y_RNA.651-201ENST00000459380 103 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 Y_RNA.703-201ENST00000516846 111 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 RNU11-2P-201ENST00000516898 142 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 RNU7-70P-201ENST00000516941 66 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 RNA5SP404-201ENST00000517118 132 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms