Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 RPS23P4-201ENST00000487908 423 ntBASIC1.22□□□□□ -2.21
FBXO40Q9UH90 AC091932.4-201ENST00000623386 200 ntBASIC1.22□□□□□ -2.21
FBXO40Q9UH90 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
FBXO40Q9UH90 SNORA24-201ENST00000384096 131 ntBASIC1.21□□□□□ -2.22
FBXO40Q9UH90 SNORA25-201ENST00000384384 134 ntBASIC1.21□□□□□ -2.22
FBXO40Q9UH90 MIR489-201ENST00000384923 84 ntBASIC1.21□□□□□ -2.22
FBXO40Q9UH90 Y_RNA.580-201ENST00000391004 95 ntBASIC1.21□□□□□ -2.22
FBXO40Q9UH90 RNA5SP95-201ENST00000410319 137 ntBASIC1.21□□□□□ -2.22
FBXO40Q9UH90 RNU7-80P-201ENST00000459562 61 ntBASIC1.21□□□□□ -2.22
FBXO40Q9UH90 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
FBXO40Q9UH90 RNU7-40P-201ENST00000516397 64 ntBASIC1.21□□□□□ -2.22
FBXO40Q9UH90 PRELID3BP2-201ENST00000605362 201 ntBASIC1.21□□□□□ -2.22
FBXO40Q9UH90 RMST_2.1-201ENST00000617263 136 ntBASIC1.21□□□□□ -2.22
FBXO40Q9UH90 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.21□□□□□ -2.22
FBXO40Q9UH90 Y_RNA.170-201ENST00000363746 110 ntBASIC1.2□□□□□ -2.22
FBXO40Q9UH90 RNU6-654P-201ENST00000364373 107 ntBASIC1.2□□□□□ -2.22
FBXO40Q9UH90 RNU4-16P-201ENST00000364737 141 ntBASIC1.2□□□□□ -2.22
FBXO40Q9UH90 RNU1-133P-201ENST00000364867 167 ntBASIC1.2□□□□□ -2.22
FBXO40Q9UH90 Y_RNA.464-201ENST00000384282 110 ntBASIC1.2□□□□□ -2.22
FBXO40Q9UH90 MIR1302-7-201ENST00000408841 72 ntBASIC1.2□□□□□ -2.22
FBXO40Q9UH90 AC090844.1-201ENST00000422019 156 ntBASIC1.2□□□□□ -2.22
FBXO40Q9UH90 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.2□□□□□ -2.22
FBXO40Q9UH90 RNU6-1212P-201ENST00000517023 104 ntBASIC1.2□□□□□ -2.22
FBXO40Q9UH90 AC112693.2-201ENST00000556538 232 ntBASIC1.2□□□□□ -2.22
FBXO40Q9UH90 AC023827.1-201ENST00000569247 97 ntBASIC1.2□□□□□ -2.22
FBXO40Q9UH90 Y_RNA.778-201ENST00000620203 90 ntBASIC1.2□□□□□ -2.22
FBXO40Q9UH90 AC008163.1-202ENST00000636004 2889 ntBASIC1.2□□□□□ -2.22
FBXO40Q9UH90 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
FBXO40Q9UH90 Y_RNA.454-201ENST00000384224 113 ntBASIC1.19□□□□□ -2.22
FBXO40Q9UH90 Y_RNA.497-201ENST00000384447 98 ntBASIC1.19□□□□□ -2.22
FBXO40Q9UH90 RNU7-73P-201ENST00000458743 63 ntBASIC1.19□□□□□ -2.22
FBXO40Q9UH90 SNORA25.12-201ENST00000516202 82 ntBASIC1.19□□□□□ -2.22
FBXO40Q9UH90 SCARNA15-202ENST00000516881 127 ntBASIC1.19□□□□□ -2.22
FBXO40Q9UH90 MIR3646-201ENST00000578301 84 ntBASIC1.19□□□□□ -2.22
FBXO40Q9UH90 AC131055.1-201ENST00000584626 316 ntBASIC1.19□□□□□ -2.22
FBXO40Q9UH90 HSPE1P19-201ENST00000603327 295 ntBASIC1.19□□□□□ -2.22
FBXO40Q9UH90 MIR6734-201ENST00000621166 68 ntBASIC1.19□□□□□ -2.22
FBXO40Q9UH90 MIR6516-201ENST00000630554 81 ntBASIC1.19□□□□□ -2.22
FBXO40Q9UH90 SNORA1.1-201ENST00000364671 133 ntBASIC1.18□□□□□ -2.22
FBXO40Q9UH90 SNORA80D-201ENST00000384488 135 ntBASIC1.18□□□□□ -2.22
FBXO40Q9UH90 Y_RNA.584-201ENST00000391090 114 ntBASIC1.18□□□□□ -2.22
FBXO40Q9UH90 RPS29P1-201ENST00000465274 159 ntBASIC1.18□□□□□ -2.22
FBXO40Q9UH90 OR2A41P-201ENST00000473586 105 ntBASIC1.18□□□□□ -2.22
FBXO40Q9UH90 RNU5E-3P-201ENST00000515913 68 ntBASIC1.18□□□□□ -2.22
FBXO40Q9UH90 SNORD79.1-201ENST00000516069 84 ntBASIC1.18□□□□□ -2.22
FBXO40Q9UH90 AP003716.2-201ENST00000528260 108 ntBASIC1.18□□□□□ -2.22
FBXO40Q9UH90 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
FBXO40Q9UH90 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.18□□□□□ -2.22
FBXO40Q9UH90 RNU6-396P-201ENST00000365369 105 ntBASIC1.17□□□□□ -2.22
FBXO40Q9UH90 RNU6-125P-201ENST00000384505 107 ntBASIC1.17□□□□□ -2.22
FBXO40Q9UH90 RNU6-205P-201ENST00000390858 107 ntBASIC1.17□□□□□ -2.22
FBXO40Q9UH90 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.17□□□□□ -2.22
FBXO40Q9UH90 AL020996.3-201ENST00000606617 222 ntBASIC1.17□□□□□ -2.22
FBXO40Q9UH90 SEPT14P17-201ENST00000617978 177 ntBASIC1.17□□□□□ -2.22
FBXO40Q9UH90 MIR6788-201ENST00000618842 66 ntBASIC1.17□□□□□ -2.22
FBXO40Q9UH90 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.16□□□□□ -2.22
FBXO40Q9UH90 Y_RNA.506-201ENST00000384494 102 ntBASIC1.16□□□□□ -2.22
FBXO40Q9UH90 SNORA2B-201ENST00000384583 137 ntBASIC1.16□□□□□ -2.22
FBXO40Q9UH90 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
FBXO40Q9UH90 MIR513C-201ENST00000401352 84 ntBASIC1.16□□□□□ -2.22
FBXO40Q9UH90 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
FBXO40Q9UH90 AC063976.4-201ENST00000421971 163 ntBASIC1.16□□□□□ -2.22
FBXO40Q9UH90 AL392103.1-201ENST00000447000 198 ntBASIC1.16□□□□□ -2.22
FBXO40Q9UH90 RNU7-197P-201ENST00000458836 62 ntBASIC1.16□□□□□ -2.22
FBXO40Q9UH90 RNU7-21P-201ENST00000459430 62 ntBASIC1.16□□□□□ -2.22
FBXO40Q9UH90 RNU7-200P-201ENST00000516105 62 ntBASIC1.16□□□□□ -2.22
FBXO40Q9UH90 MIR2115-201ENST00000516657 100 ntBASIC1.16□□□□□ -2.22
FBXO40Q9UH90 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.16□□□□□ -2.22
FBXO40Q9UH90 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
FBXO40Q9UH90 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
FBXO40Q9UH90 RNU4-38P-201ENST00000364472 129 ntBASIC1.15□□□□□ -2.23
FBXO40Q9UH90 Y_RNA.251-201ENST00000364551 99 ntBASIC1.15□□□□□ -2.23
FBXO40Q9UH90 SNORD18B-201ENST00000365659 72 ntBASIC1.15□□□□□ -2.23
FBXO40Q9UH90 RNU6-460P-201ENST00000391158 108 ntBASIC1.15□□□□□ -2.23
FBXO40Q9UH90 RNU7-90P-201ENST00000459216 62 ntBASIC1.15□□□□□ -2.23
FBXO40Q9UH90 RNU6-346P-201ENST00000516288 111 ntBASIC1.15□□□□□ -2.23
FBXO40Q9UH90 Y_RNA.686-201ENST00000516548 134 ntBASIC1.15□□□□□ -2.23
FBXO40Q9UH90 RNU2-60P-201ENST00000517290 128 ntBASIC1.15□□□□□ -2.23
FBXO40Q9UH90 MIR151B-201ENST00000584249 96 ntBASIC1.15□□□□□ -2.23
FBXO40Q9UH90 MIR6857-201ENST00000613267 93 ntBASIC1.15□□□□□ -2.23
FBXO40Q9UH90 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
FBXO40Q9UH90 RNU6-508P-201ENST00000363231 103 ntBASIC1.14□□□□□ -2.23
FBXO40Q9UH90 RNU6-1062P-201ENST00000383908 107 ntBASIC1.14□□□□□ -2.23
FBXO40Q9UH90 SNORA20-201ENST00000384662 132 ntBASIC1.14□□□□□ -2.23
FBXO40Q9UH90 SNORD38B-201ENST00000384690 67 ntBASIC1.14□□□□□ -2.23
FBXO40Q9UH90 MIR1285-1-201ENST00000408593 84 ntBASIC1.14□□□□□ -2.23
FBXO40Q9UH90 AC002429.1-201ENST00000437672 148 ntBASIC1.14□□□□□ -2.23
FBXO40Q9UH90 RPS29P28-201ENST00000446439 141 ntBASIC1.14□□□□□ -2.23
FBXO40Q9UH90 RNA5SP272-201ENST00000516095 111 ntBASIC1.14□□□□□ -2.23
FBXO40Q9UH90 RNU6-1223P-201ENST00000517124 104 ntBASIC1.14□□□□□ -2.23
FBXO40Q9UH90 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.14□□□□□ -2.23
FBXO40Q9UH90 AP000753.3-201ENST00000604083 169 ntBASIC1.14□□□□□ -2.23
FBXO40Q9UH90 AC027335.2-201ENST00000624030 375 ntBASIC1.14□□□□□ -2.23
FBXO40Q9UH90 SNORD38B-202ENST00000625943 69 ntBASIC1.14□□□□□ -2.23
FBXO40Q9UH90 MIR532-201ENST00000385025 91 ntBASIC1.13□□□□□ -2.23
FBXO40Q9UH90 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.13□□□□□ -2.23
FBXO40Q9UH90 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.13□□□□□ -2.23
FBXO40Q9UH90 RNU11-2P-201ENST00000516898 142 ntBASIC1.13□□□□□ -2.23
FBXO40Q9UH90 RNA5SP404-201ENST00000517118 132 ntBASIC1.13□□□□□ -2.23
FBXO40Q9UH90 AC211469.2-201ENST00000605461 205 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms