Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
APOBEC3BQ9UH17 SNORA20.1-201ENST00000364790 130 ntBASIC0.64□□□□□ -2.31
APOBEC3BQ9UH17 Y_RNA.393-201ENST00000383936 102 ntBASIC0.64□□□□□ -2.31
APOBEC3BQ9UH17 Y_RNA.410-201ENST00000383992 113 ntBASIC0.64□□□□□ -2.31
APOBEC3BQ9UH17 MIR216A-201ENST00000385063 110 ntBASIC0.64□□□□□ -2.31
APOBEC3BQ9UH17 MT-TN-201ENST00000387400 73 ntBASIC0.64□□□□□ -2.31
APOBEC3BQ9UH17 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
APOBEC3BQ9UH17 RNU6-733P-201ENST00000410759 104 ntBASIC0.64□□□□□ -2.31
APOBEC3BQ9UH17 SNORD83.1-201ENST00000411362 77 ntBASIC0.64□□□□□ -2.31
APOBEC3BQ9UH17 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
APOBEC3BQ9UH17 AC067940.1-201ENST00000458411 300 ntBASIC0.64□□□□□ -2.31
APOBEC3BQ9UH17 RNU7-45P-201ENST00000459460 63 ntBASIC0.64□□□□□ -2.31
APOBEC3BQ9UH17 RNU6-998P-201ENST00000515894 101 ntBASIC0.64□□□□□ -2.31
APOBEC3BQ9UH17 Y_RNA.797-201ENST00000515977 94 ntBASIC0.64□□□□□ -2.31
APOBEC3BQ9UH17 RNU6-1023P-201ENST00000516137 106 ntBASIC0.64□□□□□ -2.31
APOBEC3BQ9UH17 MIR8055-201ENST00000610739 97 ntBASIC0.64□□□□□ -2.31
APOBEC3BQ9UH17 uc_338.6-201ENST00000613544 171 ntBASIC0.64□□□□□ -2.31
APOBEC3BQ9UH17 MIR377-201ENST00000362145 69 ntBASIC0.63□□□□□ -2.31
APOBEC3BQ9UH17 Y_RNA.144-201ENST00000363521 113 ntBASIC0.63□□□□□ -2.31
APOBEC3BQ9UH17 Y_RNA.182-201ENST00000363880 111 ntBASIC0.63□□□□□ -2.31
APOBEC3BQ9UH17 RNU6-463P-201ENST00000384340 107 ntBASIC0.63□□□□□ -2.31
APOBEC3BQ9UH17 Y_RNA.478-201ENST00000384358 107 ntBASIC0.63□□□□□ -2.31
APOBEC3BQ9UH17 Y_RNA.571-201ENST00000384753 98 ntBASIC0.63□□□□□ -2.31
APOBEC3BQ9UH17 MIR548I3-201ENST00000408378 149 ntBASIC0.63□□□□□ -2.31
APOBEC3BQ9UH17 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.63□□□□□ -2.31
APOBEC3BQ9UH17 RNU4-43P-201ENST00000410628 137 ntBASIC0.63□□□□□ -2.31
APOBEC3BQ9UH17 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.63□□□□□ -2.31
APOBEC3BQ9UH17 RNU7-96P-201ENST00000459535 64 ntBASIC0.63□□□□□ -2.31
APOBEC3BQ9UH17 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
APOBEC3BQ9UH17 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.63□□□□□ -2.31
APOBEC3BQ9UH17 RN7SL793P-201ENST00000583259 296 ntBASIC0.63□□□□□ -2.31
APOBEC3BQ9UH17 MIR4264-201ENST00000583520 66 ntBASIC0.63□□□□□ -2.31
APOBEC3BQ9UH17 AL162730.1-201ENST00000605734 292 ntBASIC0.63□□□□□ -2.31
APOBEC3BQ9UH17 Z97988.1-201ENST00000637697 135 ntBASIC0.63□□□□□ -2.31
APOBEC3BQ9UH17 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
APOBEC3BQ9UH17 RNU6-369P-201ENST00000362515 102 ntBASIC0.62□□□□□ -2.31
APOBEC3BQ9UH17 SNORA1.1-201ENST00000364671 133 ntBASIC0.62□□□□□ -2.31
APOBEC3BQ9UH17 RNU6-580P-201ENST00000365159 107 ntBASIC0.62□□□□□ -2.31
APOBEC3BQ9UH17 Y_RNA.351-201ENST00000365436 96 ntBASIC0.62□□□□□ -2.31
APOBEC3BQ9UH17 SNORD38B-201ENST00000384690 67 ntBASIC0.62□□□□□ -2.31
APOBEC3BQ9UH17 SNORD99-201ENST00000408612 74 ntBASIC0.62□□□□□ -2.31
APOBEC3BQ9UH17 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.62□□□□□ -2.31
APOBEC3BQ9UH17 RNU6-602P-201ENST00000411155 105 ntBASIC0.62□□□□□ -2.31
APOBEC3BQ9UH17 SEPT7P4-201ENST00000437076 306 ntBASIC0.62□□□□□ -2.31
APOBEC3BQ9UH17 RNU7-62P-201ENST00000458856 62 ntBASIC0.62□□□□□ -2.31
APOBEC3BQ9UH17 U7.7-201ENST00000459276 60 ntBASIC0.62□□□□□ -2.31
APOBEC3BQ9UH17 RNU4-71P-201ENST00000516258 113 ntBASIC0.62□□□□□ -2.31
APOBEC3BQ9UH17 RNU6-1110P-201ENST00000516462 101 ntBASIC0.62□□□□□ -2.31
APOBEC3BQ9UH17 MIR5197-201ENST00000583721 112 ntBASIC0.62□□□□□ -2.31
APOBEC3BQ9UH17 MIR6740-201ENST00000618268 113 ntBASIC0.62□□□□□ -2.31
APOBEC3BQ9UH17 SNORD38B-202ENST00000625943 69 ntBASIC0.62□□□□□ -2.31
APOBEC3BQ9UH17 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
APOBEC3BQ9UH17 RNA5SP347-201ENST00000362445 119 ntBASIC0.61□□□□□ -2.31
APOBEC3BQ9UH17 RNU6-978P-201ENST00000364371 103 ntBASIC0.61□□□□□ -2.31
APOBEC3BQ9UH17 RNU4-70P-201ENST00000384579 139 ntBASIC0.61□□□□□ -2.31
APOBEC3BQ9UH17 Y_RNA.542-201ENST00000384641 111 ntBASIC0.61□□□□□ -2.31
APOBEC3BQ9UH17 MIR1827-201ENST00000408549 66 ntBASIC0.61□□□□□ -2.31
APOBEC3BQ9UH17 AL365205.2-201ENST00000594586 68 ntBASIC0.61□□□□□ -2.31
APOBEC3BQ9UH17 AL353765.1-201ENST00000605514 183 ntBASIC0.61□□□□□ -2.31
APOBEC3BQ9UH17 MIR1-1-201ENST00000362147 71 ntBASIC0.6□□□□□ -2.31
APOBEC3BQ9UH17 MIR302B-201ENST00000362188 73 ntBASIC0.6□□□□□ -2.31
APOBEC3BQ9UH17 Y_RNA.121-201ENST00000363309 113 ntBASIC0.6□□□□□ -2.31
APOBEC3BQ9UH17 RNU6-934P-201ENST00000365154 107 ntBASIC0.6□□□□□ -2.31
APOBEC3BQ9UH17 RNU6-47P-201ENST00000383866 107 ntBASIC0.6□□□□□ -2.31
APOBEC3BQ9UH17 Y_RNA.412-201ENST00000384001 104 ntBASIC0.6□□□□□ -2.31
APOBEC3BQ9UH17 RNY1P4-201ENST00000384595 115 ntBASIC0.6□□□□□ -2.31
APOBEC3BQ9UH17 AC113410.1-201ENST00000505029 247 ntBASIC0.6□□□□□ -2.31
APOBEC3BQ9UH17 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.6□□□□□ -2.31
APOBEC3BQ9UH17 SNORD116-25-201ENST00000516517 92 ntBASIC0.6□□□□□ -2.31
APOBEC3BQ9UH17 MIR4771-2-201ENST00000577758 74 ntBASIC0.6□□□□□ -2.31
APOBEC3BQ9UH17 MIR378D2-201ENST00000580636 98 ntBASIC0.6□□□□□ -2.31
APOBEC3BQ9UH17 MIR4771-1-201ENST00000582617 74 ntBASIC0.6□□□□□ -2.31
APOBEC3BQ9UH17 U6.106-201ENST00000636360 105 ntBASIC0.6□□□□□ -2.31
APOBEC3BQ9UH17 AC010332.2-201ENST00000613083 1904 ntBASIC0.6□□□□□ -2.31
APOBEC3BQ9UH17 AL596211.1-201ENST00000569873 2277 ntBASIC0.59□□□□□ -2.31
APOBEC3BQ9UH17 RNU6-1336P-201ENST00000383886 109 ntBASIC0.59□□□□□ -2.31
APOBEC3BQ9UH17 RNU6-643P-201ENST00000384018 107 ntBASIC0.59□□□□□ -2.31
APOBEC3BQ9UH17 MIR588-201ENST00000384900 83 ntBASIC0.59□□□□□ -2.31
APOBEC3BQ9UH17 SNORD12C-201ENST00000386307 89 ntBASIC0.59□□□□□ -2.31
APOBEC3BQ9UH17 RNU6-918P-201ENST00000391219 106 ntBASIC0.59□□□□□ -2.31
APOBEC3BQ9UH17 MIR936-201ENST00000401264 98 ntBASIC0.59□□□□□ -2.31
APOBEC3BQ9UH17 Y_RNA.618-201ENST00000410949 107 ntBASIC0.59□□□□□ -2.31
APOBEC3BQ9UH17 RPS26P5-201ENST00000418544 335 ntBASIC0.59□□□□□ -2.31
APOBEC3BQ9UH17 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.59□□□□□ -2.31
APOBEC3BQ9UH17 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.59□□□□□ -2.31
APOBEC3BQ9UH17 MIR6779-201ENST00000617283 64 ntBASIC0.59□□□□□ -2.31
APOBEC3BQ9UH17 AC091932.4-201ENST00000623386 200 ntBASIC0.59□□□□□ -2.31
APOBEC3BQ9UH17 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.58□□□□□ -2.32
APOBEC3BQ9UH17 MIR411-201ENST00000362239 96 ntBASIC0.58□□□□□ -2.32
APOBEC3BQ9UH17 Y_RNA.200-201ENST00000364018 102 ntBASIC0.58□□□□□ -2.32
APOBEC3BQ9UH17 RNU6-275P-201ENST00000364910 107 ntBASIC0.58□□□□□ -2.32
APOBEC3BQ9UH17 RNU6-1292P-201ENST00000383856 107 ntBASIC0.58□□□□□ -2.32
APOBEC3BQ9UH17 SNORD105-201ENST00000386910 85 ntBASIC0.58□□□□□ -2.32
APOBEC3BQ9UH17 SNORA26.6-201ENST00000391256 115 ntBASIC0.58□□□□□ -2.32
APOBEC3BQ9UH17 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.58□□□□□ -2.32
APOBEC3BQ9UH17 AC011195.1-201ENST00000578177 177 ntBASIC0.58□□□□□ -2.32
APOBEC3BQ9UH17 AC025627.3-201ENST00000582078 182 ntBASIC0.58□□□□□ -2.32
APOBEC3BQ9UH17 AC020891.4-201ENST00000605745 93 ntBASIC0.58□□□□□ -2.32
APOBEC3BQ9UH17 MIR6717-201ENST00000622747 73 ntBASIC0.58□□□□□ -2.32
APOBEC3BQ9UH17 Y_RNA.83-201ENST00000363005 113 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms