Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
LRIT1Q9P2V4 HMGN1P33-201ENST00000432945 451 ntBASIC1.73□□□□□ -2.13
LRIT1Q9P2V4 RPS29P29-201ENST00000456396 171 ntBASIC1.73□□□□□ -2.13
LRIT1Q9P2V4 SNORD13-201ENST00000459299 104 ntBASIC1.73□□□□□ -2.13
LRIT1Q9P2V4 MIR1270-201ENST00000459320 83 ntBASIC1.73□□□□□ -2.13
LRIT1Q9P2V4 RNU6-168P-201ENST00000516189 101 ntBASIC1.73□□□□□ -2.13
LRIT1Q9P2V4 SNORA74.3-201ENST00000517108 154 ntBASIC1.73□□□□□ -2.13
LRIT1Q9P2V4 AC004812.1-201ENST00000540773 146 ntBASIC1.73□□□□□ -2.13
LRIT1Q9P2V4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.73□□□□□ -2.13
LRIT1Q9P2V4 MIR4791-201ENST00000607666 84 ntBASIC1.73□□□□□ -2.13
LRIT1Q9P2V4 uc_338.20-201ENST00000621563 178 ntBASIC1.73□□□□□ -2.13
LRIT1Q9P2V4 MIR6841-201ENST00000637129 72 ntBASIC1.73□□□□□ -2.13
LRIT1Q9P2V4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.73□□□□□ -2.13
LRIT1Q9P2V4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LRIT1Q9P2V4 MIR302B-201ENST00000362188 73 ntBASIC1.72□□□□□ -2.13
LRIT1Q9P2V4 SNORA1.2-201ENST00000365189 134 ntBASIC1.72□□□□□ -2.13
LRIT1Q9P2V4 MIR548D2-201ENST00000384955 97 ntBASIC1.72□□□□□ -2.13
LRIT1Q9P2V4 AC004965.1-201ENST00000413033 213 ntBASIC1.72□□□□□ -2.13
LRIT1Q9P2V4 AC108667.1-201ENST00000428618 249 ntBASIC1.72□□□□□ -2.13
LRIT1Q9P2V4 RNU7-67P-201ENST00000459003 62 ntBASIC1.72□□□□□ -2.13
LRIT1Q9P2V4 RPL39P34-201ENST00000477141 156 ntBASIC1.72□□□□□ -2.13
LRIT1Q9P2V4 MIR3935-201ENST00000583472 104 ntBASIC1.72□□□□□ -2.13
LRIT1Q9P2V4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.72□□□□□ -2.13
LRIT1Q9P2V4 AL513534.2-201ENST00000603836 250 ntBASIC1.72□□□□□ -2.13
LRIT1Q9P2V4 AC243994.1-201ENST00000618627 109 ntBASIC1.72□□□□□ -2.13
LRIT1Q9P2V4 AC087741.2-201ENST00000619415 172 ntBASIC1.72□□□□□ -2.13
LRIT1Q9P2V4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.72□□□□□ -2.13
LRIT1Q9P2V4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.71□□□□□ -2.14
LRIT1Q9P2V4 RNU6-1014P-201ENST00000383940 103 ntBASIC1.71□□□□□ -2.14
LRIT1Q9P2V4 Y_RNA.470-201ENST00000384307 117 ntBASIC1.71□□□□□ -2.14
LRIT1Q9P2V4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.71□□□□□ -2.14
LRIT1Q9P2V4 RNU6-1319P-201ENST00000390855 104 ntBASIC1.71□□□□□ -2.14
LRIT1Q9P2V4 RNU6-747P-201ENST00000390928 104 ntBASIC1.71□□□□□ -2.14
LRIT1Q9P2V4 RNU6-241P-201ENST00000391148 104 ntBASIC1.71□□□□□ -2.14
LRIT1Q9P2V4 SNORA19.1-201ENST00000410656 129 ntBASIC1.71□□□□□ -2.14
LRIT1Q9P2V4 RNU6-177P-201ENST00000411257 104 ntBASIC1.71□□□□□ -2.14
LRIT1Q9P2V4 MIR502-201ENST00000606349 86 ntBASIC1.71□□□□□ -2.14
LRIT1Q9P2V4 AL020996.3-201ENST00000606617 222 ntBASIC1.71□□□□□ -2.14
LRIT1Q9P2V4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 RNY4P6-201ENST00000363667 96 ntBASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 Y_RNA.163-201ENST00000363702 113 ntBASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 U8.6-201ENST00000364939 135 ntBASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 Y_RNA.323-201ENST00000365157 109 ntBASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 Y_RNA.495-201ENST00000384435 112 ntBASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 Y_RNA.531-201ENST00000384589 121 ntBASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 SNORA17.3-201ENST00000391159 129 ntBASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 MIR934-201ENST00000401241 83 ntBASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 SUMO2P12-201ENST00000405924 140 ntBASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 AL031737.1-201ENST00000450125 223 ntBASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 RNU7-73P-201ENST00000458743 63 ntBASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 AC107297.1-201ENST00000459991 176 ntBASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 RPS23P4-201ENST00000487908 423 ntBASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 RNU6-412P-201ENST00000516434 106 ntBASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 Y_RNA.773-201ENST00000607168 90 ntBASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 MIR6717-201ENST00000622747 73 ntBASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.7□□□□□ -2.14
LRIT1Q9P2V4 Y_RNA.328-201ENST00000365208 113 ntBASIC1.69□□□□□ -2.14
LRIT1Q9P2V4 RNU7-6P-201ENST00000516845 62 ntBASIC1.69□□□□□ -2.14
LRIT1Q9P2V4 MIR4764-201ENST00000580680 88 ntBASIC1.69□□□□□ -2.14
LRIT1Q9P2V4 MIR3163-201ENST00000581592 73 ntBASIC1.69□□□□□ -2.14
LRIT1Q9P2V4 RNU6-94P-201ENST00000607728 107 ntBASIC1.69□□□□□ -2.14
LRIT1Q9P2V4 MIR1255B1-201ENST00000636325 63 ntBASIC1.69□□□□□ -2.14
LRIT1Q9P2V4 AL589743.1-201ENST00000551932 2712 ntBASIC1.68□□□□□ -2.14
LRIT1Q9P2V4 SNORA22.1-201ENST00000362701 134 ntBASIC1.68□□□□□ -2.14
LRIT1Q9P2V4 SNORA51.10-201ENST00000384418 136 ntBASIC1.68□□□□□ -2.14
LRIT1Q9P2V4 Y_RNA.537-201ENST00000384626 109 ntBASIC1.68□□□□□ -2.14
LRIT1Q9P2V4 MIR653-201ENST00000385279 96 ntBASIC1.68□□□□□ -2.14
LRIT1Q9P2V4 SNORD41-201ENST00000386967 70 ntBASIC1.68□□□□□ -2.14
LRIT1Q9P2V4 AL022718.1-201ENST00000412004 84 ntBASIC1.68□□□□□ -2.14
LRIT1Q9P2V4 AC090844.1-201ENST00000422019 156 ntBASIC1.68□□□□□ -2.14
LRIT1Q9P2V4 RPL31P63-201ENST00000422565 375 ntBASIC1.68□□□□□ -2.14
LRIT1Q9P2V4 AC245517.4-201ENST00000448601 281 ntBASIC1.68□□□□□ -2.14
LRIT1Q9P2V4 RNU7-41P-201ENST00000515917 61 ntBASIC1.68□□□□□ -2.14
LRIT1Q9P2V4 AC068339.1-201ENST00000526965 141 ntBASIC1.68□□□□□ -2.14
LRIT1Q9P2V4 MIR4419B-201ENST00000577260 68 ntBASIC1.68□□□□□ -2.14
LRIT1Q9P2V4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.68□□□□□ -2.14
LRIT1Q9P2V4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LRIT1Q9P2V4 JTBP1-201ENST00000441314 247 ntBASIC1.67□□□□□ -2.14
LRIT1Q9P2V4 snoU13.9-201ENST00000458927 103 ntBASIC1.67□□□□□ -2.14
LRIT1Q9P2V4 AC005908.1-201ENST00000468701 347 ntBASIC1.67□□□□□ -2.14
LRIT1Q9P2V4 RNU7-53P-201ENST00000516705 60 ntBASIC1.67□□□□□ -2.14
LRIT1Q9P2V4 RNU6-537P-201ENST00000517277 103 ntBASIC1.67□□□□□ -2.14
LRIT1Q9P2V4 SNORA77B-201ENST00000578179 125 ntBASIC1.67□□□□□ -2.14
LRIT1Q9P2V4 MIR5009-201ENST00000578736 100 ntBASIC1.67□□□□□ -2.14
LRIT1Q9P2V4 MIR3618-201ENST00000580330 88 ntBASIC1.67□□□□□ -2.14
LRIT1Q9P2V4 snoU13.31-201ENST00000607291 104 ntBASIC1.67□□□□□ -2.14
LRIT1Q9P2V4 MIR8055-201ENST00000610739 97 ntBASIC1.67□□□□□ -2.14
LRIT1Q9P2V4 AC008133.2-201ENST00000624540 351 ntBASIC1.67□□□□□ -2.14
LRIT1Q9P2V4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
LRIT1Q9P2V4 WWP1P1-201ENST00000466609 2769 ntBASIC1.66□□□□□ -2.14
LRIT1Q9P2V4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LRIT1Q9P2V4 Y_RNA.348-201ENST00000365403 103 ntBASIC1.66□□□□□ -2.14
LRIT1Q9P2V4 RNU6-32P-201ENST00000383948 107 ntBASIC1.66□□□□□ -2.14
LRIT1Q9P2V4 RNU6-756P-201ENST00000383997 107 ntBASIC1.66□□□□□ -2.14
LRIT1Q9P2V4 SNORA70.7-201ENST00000384159 133 ntBASIC1.66□□□□□ -2.14
LRIT1Q9P2V4 RNU6-13P-201ENST00000384248 107 ntBASIC1.66□□□□□ -2.14
LRIT1Q9P2V4 RNU6-12P-201ENST00000384604 107 ntBASIC1.66□□□□□ -2.14
LRIT1Q9P2V4 RNU6-41P-201ENST00000384741 107 ntBASIC1.66□□□□□ -2.14
LRIT1Q9P2V4 MIR513A1-201ENST00000385138 129 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 240.8 ms