Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 RNU6-379P-201ENST00000363813 104 ntBASIC0.74□□□□□ -2.29
HACD3Q9P035 Y_RNA.188-201ENST00000363952 111 ntBASIC0.74□□□□□ -2.29
HACD3Q9P035 SNORA25.9-201ENST00000365087 128 ntBASIC0.74□□□□□ -2.29
HACD3Q9P035 AL606490.4-201ENST00000423117 127 ntBASIC0.74□□□□□ -2.29
HACD3Q9P035 SEPT7P4-201ENST00000437076 306 ntBASIC0.74□□□□□ -2.29
HACD3Q9P035 RNU7-62P-201ENST00000458856 62 ntBASIC0.74□□□□□ -2.29
HACD3Q9P035 RNU7-45P-201ENST00000459460 63 ntBASIC0.74□□□□□ -2.29
HACD3Q9P035 RNU6-1271P-201ENST00000517049 105 ntBASIC0.74□□□□□ -2.29
HACD3Q9P035 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.74□□□□□ -2.29
HACD3Q9P035 AC091932.4-201ENST00000623386 200 ntBASIC0.74□□□□□ -2.29
HACD3Q9P035 RNU6-1020P-201ENST00000363684 107 ntBASIC0.73□□□□□ -2.29
HACD3Q9P035 Y_RNA.191-201ENST00000363972 113 ntBASIC0.73□□□□□ -2.29
HACD3Q9P035 Y_RNA.274-201ENST00000364714 101 ntBASIC0.73□□□□□ -2.29
HACD3Q9P035 Y_RNA.401-201ENST00000383965 117 ntBASIC0.73□□□□□ -2.29
HACD3Q9P035 MIR624-201ENST00000385217 97 ntBASIC0.73□□□□□ -2.29
HACD3Q9P035 MT-TG-201ENST00000387429 68 ntBASIC0.73□□□□□ -2.29
HACD3Q9P035 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.73□□□□□ -2.29
HACD3Q9P035 RNU7-80P-201ENST00000459562 61 ntBASIC0.73□□□□□ -2.29
HACD3Q9P035 SCARNA15-202ENST00000516881 127 ntBASIC0.73□□□□□ -2.29
HACD3Q9P035 AL353765.1-201ENST00000605514 183 ntBASIC0.73□□□□□ -2.29
HACD3Q9P035 MIR6717-201ENST00000622747 73 ntBASIC0.73□□□□□ -2.29
HACD3Q9P035 MIR1-1-201ENST00000362147 71 ntBASIC0.72□□□□□ -2.29
HACD3Q9P035 MIR302B-201ENST00000362188 73 ntBASIC0.72□□□□□ -2.29
HACD3Q9P035 RNU6-934P-201ENST00000365154 107 ntBASIC0.72□□□□□ -2.29
HACD3Q9P035 SNORD114-22-201ENST00000365423 72 ntBASIC0.72□□□□□ -2.29
HACD3Q9P035 Y_RNA.454-201ENST00000384224 113 ntBASIC0.72□□□□□ -2.29
HACD3Q9P035 RNA5SP127-201ENST00000411051 133 ntBASIC0.72□□□□□ -2.29
HACD3Q9P035 SNORD83.1-201ENST00000411362 77 ntBASIC0.72□□□□□ -2.29
HACD3Q9P035 AC113410.1-201ENST00000505029 247 ntBASIC0.72□□□□□ -2.29
HACD3Q9P035 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.72□□□□□ -2.29
HACD3Q9P035 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.72□□□□□ -2.29
HACD3Q9P035 MIR4431-201ENST00000579990 94 ntBASIC0.72□□□□□ -2.29
HACD3Q9P035 AC025627.3-201ENST00000582078 182 ntBASIC0.72□□□□□ -2.29
HACD3Q9P035 AC141273.2-201ENST00000618989 130 ntBASIC0.72□□□□□ -2.29
HACD3Q9P035 AC078938.1-201ENST00000620993 318 ntBASIC0.72□□□□□ -2.29
HACD3Q9P035 AL596211.1-201ENST00000569873 2277 ntBASIC0.72□□□□□ -2.29
HACD3Q9P035 SNORD12C-201ENST00000386307 89 ntBASIC0.71□□□□□ -2.3
HACD3Q9P035 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.71□□□□□ -2.3
HACD3Q9P035 RPS26P5-201ENST00000418544 335 ntBASIC0.71□□□□□ -2.3
HACD3Q9P035 AC015818.7-201ENST00000428754 109 ntBASIC0.71□□□□□ -2.3
HACD3Q9P035 MTND5P15-201ENST00000434246 349 ntBASIC0.71□□□□□ -2.3
HACD3Q9P035 AC087499.7-201ENST00000441958 109 ntBASIC0.71□□□□□ -2.3
HACD3Q9P035 snoU13.2-201ENST00000459201 104 ntBASIC0.71□□□□□ -2.3
HACD3Q9P035 RNU6-1219P-201ENST00000516143 112 ntBASIC0.71□□□□□ -2.3
HACD3Q9P035 AC022559.1-201ENST00000520905 205 ntBASIC0.71□□□□□ -2.3
HACD3Q9P035 AL136317.1-201ENST00000612653 226 ntBASIC0.71□□□□□ -2.3
HACD3Q9P035 MIR6835-201ENST00000621552 64 ntBASIC0.71□□□□□ -2.3
HACD3Q9P035 AC023934.1-201ENST00000574529 2389 ntBASIC0.71□□□□□ -2.3
HACD3Q9P035 Y_RNA.233-201ENST00000364407 101 ntBASIC0.7□□□□□ -2.3
HACD3Q9P035 RNU6-597P-201ENST00000365620 102 ntBASIC0.7□□□□□ -2.3
HACD3Q9P035 RNU6-1336P-201ENST00000383886 109 ntBASIC0.7□□□□□ -2.3
HACD3Q9P035 MIR520E-201ENST00000384867 87 ntBASIC0.7□□□□□ -2.3
HACD3Q9P035 MIR588-201ENST00000384900 83 ntBASIC0.7□□□□□ -2.3
HACD3Q9P035 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.7□□□□□ -2.3
HACD3Q9P035 SNORD99-201ENST00000408612 74 ntBASIC0.7□□□□□ -2.3
HACD3Q9P035 CYP3A137P-201ENST00000562436 69 ntBASIC0.7□□□□□ -2.3
HACD3Q9P035 MIR4452-201ENST00000583004 71 ntBASIC0.7□□□□□ -2.3
HACD3Q9P035 SNORA25.7-201ENST00000364375 127 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 RNU6-312P-201ENST00000364629 107 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 Y_RNA.297-201ENST00000364950 91 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 MIR563-201ENST00000385080 79 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 RNU6-1319P-201ENST00000390855 104 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 RNU6-747P-201ENST00000390928 104 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 RNU6-241P-201ENST00000391148 104 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 RNU6-177P-201ENST00000411257 104 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 Y_RNA.644-201ENST00000459006 113 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 Y_RNA.674-201ENST00000516362 113 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 RNU6-1149P-201ENST00000516810 97 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 RNU6-388P-201ENST00000517012 105 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 RNU6-389P-201ENST00000517048 105 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 MIR4771-2-201ENST00000577758 74 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 MIR4771-1-201ENST00000582617 74 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 AL590095.2-201ENST00000604136 117 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 AC010332.2-201ENST00000613083 1904 ntBASIC0.69□□□□□ -2.3
HACD3Q9P035 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
HACD3Q9P035 RNU1-133P-201ENST00000364867 167 ntBASIC0.68□□□□□ -2.3
HACD3Q9P035 Y_RNA.393-201ENST00000383936 102 ntBASIC0.68□□□□□ -2.3
HACD3Q9P035 Y_RNA.430-201ENST00000384081 110 ntBASIC0.68□□□□□ -2.3
HACD3Q9P035 Y_RNA.515-201ENST00000384535 112 ntBASIC0.68□□□□□ -2.3
HACD3Q9P035 Y_RNA.521-201ENST00000384560 114 ntBASIC0.68□□□□□ -2.3
HACD3Q9P035 RNU6-768P-201ENST00000384683 107 ntBASIC0.68□□□□□ -2.3
HACD3Q9P035 MIR499A-201ENST00000384903 122 ntBASIC0.68□□□□□ -2.3
HACD3Q9P035 SNORD105-201ENST00000386910 85 ntBASIC0.68□□□□□ -2.3
HACD3Q9P035 RNU6-1165P-201ENST00000410119 107 ntBASIC0.68□□□□□ -2.3
HACD3Q9P035 RNA5SP261-201ENST00000410536 106 ntBASIC0.68□□□□□ -2.3
HACD3Q9P035 AC020891.4-201ENST00000605745 93 ntBASIC0.68□□□□□ -2.3
HACD3Q9P035 RMST_2.1-201ENST00000617263 136 ntBASIC0.68□□□□□ -2.3
HACD3Q9P035 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.67□□□□□ -2.3
HACD3Q9P035 MTND5P32-201ENST00000560711 1802 ntBASIC0.67□□□□□ -2.3
HACD3Q9P035 Y_RNA.354-201ENST00000365448 111 ntBASIC0.67□□□□□ -2.3
HACD3Q9P035 Y_RNA.476-201ENST00000384347 108 ntBASIC0.67□□□□□ -2.3
HACD3Q9P035 Y_RNA.552-201ENST00000384665 112 ntBASIC0.67□□□□□ -2.3
HACD3Q9P035 MIR18B-201ENST00000454574 71 ntBASIC0.67□□□□□ -2.3
HACD3Q9P035 AC072026.1-201ENST00000605023 201 ntBASIC0.67□□□□□ -2.3
HACD3Q9P035 MIR6841-201ENST00000637129 72 ntBASIC0.67□□□□□ -2.3
HACD3Q9P035 MIR30D-201ENST00000362283 70 ntBASIC0.66□□□□□ -2.3
HACD3Q9P035 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
HACD3Q9P035 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms