Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RNU6-804P-201ENST00000384286 107 ntBASIC0.92□□□□□ -2.26
NDE1Q9NXR1 SNORA80D-201ENST00000384488 135 ntBASIC0.92□□□□□ -2.26
NDE1Q9NXR1 MIR624-201ENST00000385217 97 ntBASIC0.92□□□□□ -2.26
NDE1Q9NXR1 PCNPP3-201ENST00000393579 471 ntBASIC0.92□□□□□ -2.26
NDE1Q9NXR1 RNU6-1135P-201ENST00000411083 103 ntBASIC0.92□□□□□ -2.26
NDE1Q9NXR1 RNU2-64P-201ENST00000411315 191 ntBASIC0.92□□□□□ -2.26
NDE1Q9NXR1 AC063976.4-201ENST00000421971 163 ntBASIC0.92□□□□□ -2.26
NDE1Q9NXR1 snoU13.16-201ENST00000459350 104 ntBASIC0.92□□□□□ -2.26
NDE1Q9NXR1 RNU7-21P-201ENST00000459430 62 ntBASIC0.92□□□□□ -2.26
NDE1Q9NXR1 RNU7-96P-201ENST00000459535 64 ntBASIC0.92□□□□□ -2.26
NDE1Q9NXR1 RNU7-53P-201ENST00000516705 60 ntBASIC0.92□□□□□ -2.26
NDE1Q9NXR1 SEPT14P17-201ENST00000617978 177 ntBASIC0.92□□□□□ -2.26
NDE1Q9NXR1 AC091932.4-201ENST00000623386 200 ntBASIC0.92□□□□□ -2.26
NDE1Q9NXR1 Y_RNA.52-201ENST00000362760 96 ntBASIC0.91□□□□□ -2.26
NDE1Q9NXR1 Y_RNA.441-201ENST00000384123 112 ntBASIC0.91□□□□□ -2.26
NDE1Q9NXR1 RNU6-125P-201ENST00000384505 107 ntBASIC0.91□□□□□ -2.26
NDE1Q9NXR1 RNU6-205P-201ENST00000390858 107 ntBASIC0.91□□□□□ -2.26
NDE1Q9NXR1 RNU6-907P-201ENST00000390924 102 ntBASIC0.91□□□□□ -2.26
NDE1Q9NXR1 SNORD37.2-201ENST00000391075 66 ntBASIC0.91□□□□□ -2.26
NDE1Q9NXR1 AC002429.1-201ENST00000437672 148 ntBASIC0.91□□□□□ -2.26
NDE1Q9NXR1 RNU7-73P-201ENST00000458743 63 ntBASIC0.91□□□□□ -2.26
NDE1Q9NXR1 AC087343.1-201ENST00000477341 475 ntBASIC0.91□□□□□ -2.26
NDE1Q9NXR1 UBL5P1-201ENST00000507979 193 ntBASIC0.91□□□□□ -2.26
NDE1Q9NXR1 RNU7-121P-201ENST00000516604 62 ntBASIC0.91□□□□□ -2.26
NDE1Q9NXR1 SCARNA15-202ENST00000516881 127 ntBASIC0.91□□□□□ -2.26
NDE1Q9NXR1 MIR3668-201ENST00000582138 75 ntBASIC0.91□□□□□ -2.26
NDE1Q9NXR1 MIR6844-201ENST00000637122 62 ntBASIC0.91□□□□□ -2.26
NDE1Q9NXR1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
NDE1Q9NXR1 MIR302B-201ENST00000362188 73 ntBASIC0.9□□□□□ -2.27
NDE1Q9NXR1 SNORD114-27-201ENST00000363766 70 ntBASIC0.9□□□□□ -2.27
NDE1Q9NXR1 RNU4-16P-201ENST00000364737 141 ntBASIC0.9□□□□□ -2.27
NDE1Q9NXR1 RNU6-886P-201ENST00000384319 105 ntBASIC0.9□□□□□ -2.27
NDE1Q9NXR1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.9□□□□□ -2.27
NDE1Q9NXR1 RPS23P4-201ENST00000487908 423 ntBASIC0.9□□□□□ -2.27
NDE1Q9NXR1 AL020996.3-201ENST00000606617 222 ntBASIC0.9□□□□□ -2.27
NDE1Q9NXR1 AL391516.1-201ENST00000554380 2449 ntBASIC0.9□□□□□ -2.27
NDE1Q9NXR1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
NDE1Q9NXR1 Y_RNA.36-201ENST00000362602 112 ntBASIC0.89□□□□□ -2.27
NDE1Q9NXR1 RNU4-11P-201ENST00000365287 132 ntBASIC0.89□□□□□ -2.27
NDE1Q9NXR1 SNORD116-18-201ENST00000383961 92 ntBASIC0.89□□□□□ -2.27
NDE1Q9NXR1 SNORA2B-201ENST00000384583 137 ntBASIC0.89□□□□□ -2.27
NDE1Q9NXR1 SNORA75.5-201ENST00000391291 81 ntBASIC0.89□□□□□ -2.27
NDE1Q9NXR1 RNU7-90P-201ENST00000459216 62 ntBASIC0.89□□□□□ -2.27
NDE1Q9NXR1 SNORD124-201ENST00000459577 104 ntBASIC0.89□□□□□ -2.27
NDE1Q9NXR1 RPS29P1-201ENST00000465274 159 ntBASIC0.89□□□□□ -2.27
NDE1Q9NXR1 DNAJC19P2-201ENST00000593340 302 ntBASIC0.89□□□□□ -2.27
NDE1Q9NXR1 AC013244.2-201ENST00000603396 103 ntBASIC0.89□□□□□ -2.27
NDE1Q9NXR1 RNU6-94P-201ENST00000607728 107 ntBASIC0.89□□□□□ -2.27
NDE1Q9NXR1 AC022709.1-201ENST00000615967 87 ntBASIC0.89□□□□□ -2.27
NDE1Q9NXR1 AC012676.2-201ENST00000619258 186 ntBASIC0.89□□□□□ -2.27
NDE1Q9NXR1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.89□□□□□ -2.27
NDE1Q9NXR1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
NDE1Q9NXR1 MIR96-201ENST00000362288 78 ntBASIC0.88□□□□□ -2.27
NDE1Q9NXR1 RNU6-508P-201ENST00000363231 103 ntBASIC0.88□□□□□ -2.27
NDE1Q9NXR1 RNU6-151P-201ENST00000364158 107 ntBASIC0.88□□□□□ -2.27
NDE1Q9NXR1 SNORA1.1-201ENST00000364671 133 ntBASIC0.88□□□□□ -2.27
NDE1Q9NXR1 RNU1-133P-201ENST00000364867 167 ntBASIC0.88□□□□□ -2.27
NDE1Q9NXR1 RNU6-396P-201ENST00000365369 105 ntBASIC0.88□□□□□ -2.27
NDE1Q9NXR1 Y_RNA.398-201ENST00000383952 99 ntBASIC0.88□□□□□ -2.27
NDE1Q9NXR1 Y_RNA.497-201ENST00000384447 98 ntBASIC0.88□□□□□ -2.27
NDE1Q9NXR1 MIR520E-201ENST00000384867 87 ntBASIC0.88□□□□□ -2.27
NDE1Q9NXR1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.88□□□□□ -2.27
NDE1Q9NXR1 RNU7-80P-201ENST00000459562 61 ntBASIC0.88□□□□□ -2.27
NDE1Q9NXR1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.88□□□□□ -2.27
NDE1Q9NXR1 MIR2115-201ENST00000516657 100 ntBASIC0.88□□□□□ -2.27
NDE1Q9NXR1 RNU7-70P-201ENST00000516941 66 ntBASIC0.88□□□□□ -2.27
NDE1Q9NXR1 RNU6-1223P-201ENST00000517124 104 ntBASIC0.88□□□□□ -2.27
NDE1Q9NXR1 MTND5P41-201ENST00000517498 206 ntBASIC0.88□□□□□ -2.27
NDE1Q9NXR1 AC131055.1-201ENST00000584626 316 ntBASIC0.88□□□□□ -2.27
NDE1Q9NXR1 AC098479.1-201ENST00000609225 154 ntBASIC0.88□□□□□ -2.27
NDE1Q9NXR1 MIR8055-201ENST00000610739 97 ntBASIC0.88□□□□□ -2.27
NDE1Q9NXR1 SNORD114-26-201ENST00000363543 72 ntBASIC0.87□□□□□ -2.27
NDE1Q9NXR1 MIR598-201ENST00000384868 97 ntBASIC0.87□□□□□ -2.27
NDE1Q9NXR1 MT-TR-201ENST00000387439 65 ntBASIC0.87□□□□□ -2.27
NDE1Q9NXR1 SNORD12-201ENST00000391002 90 ntBASIC0.87□□□□□ -2.27
NDE1Q9NXR1 AC244023.1-201ENST00000426884 112 ntBASIC0.87□□□□□ -2.27
NDE1Q9NXR1 snoU13.21-201ENST00000459368 105 ntBASIC0.87□□□□□ -2.27
NDE1Q9NXR1 RNU11-2P-201ENST00000516898 142 ntBASIC0.87□□□□□ -2.27
NDE1Q9NXR1 RNU2-60P-201ENST00000517290 128 ntBASIC0.87□□□□□ -2.27
NDE1Q9NXR1 AC036111.3-201ENST00000526389 112 ntBASIC0.87□□□□□ -2.27
NDE1Q9NXR1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.87□□□□□ -2.27
NDE1Q9NXR1 AC242498.1-201ENST00000604134 111 ntBASIC0.87□□□□□ -2.27
NDE1Q9NXR1 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.87□□□□□ -2.27
NDE1Q9NXR1 AC021753.1-201ENST00000635724 168 ntBASIC0.87□□□□□ -2.27
NDE1Q9NXR1 Z97988.1-201ENST00000637697 135 ntBASIC0.87□□□□□ -2.27
NDE1Q9NXR1 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
NDE1Q9NXR1 Y_RNA.454-201ENST00000384224 113 ntBASIC0.86□□□□□ -2.27
NDE1Q9NXR1 Y_RNA.540-201ENST00000384638 111 ntBASIC0.86□□□□□ -2.27
NDE1Q9NXR1 SNORA26.6-201ENST00000391256 115 ntBASIC0.86□□□□□ -2.27
NDE1Q9NXR1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.86□□□□□ -2.27
NDE1Q9NXR1 RNU6-613P-201ENST00000410412 108 ntBASIC0.86□□□□□ -2.27
NDE1Q9NXR1 RNU6-394P-201ENST00000410735 107 ntBASIC0.86□□□□□ -2.27
NDE1Q9NXR1 RNU6-602P-201ENST00000411155 105 ntBASIC0.86□□□□□ -2.27
NDE1Q9NXR1 AC015818.7-201ENST00000428754 109 ntBASIC0.86□□□□□ -2.27
NDE1Q9NXR1 AC087499.7-201ENST00000441958 109 ntBASIC0.86□□□□□ -2.27
NDE1Q9NXR1 MIR3144-201ENST00000579460 79 ntBASIC0.86□□□□□ -2.27
NDE1Q9NXR1 MIR151B-201ENST00000584249 96 ntBASIC0.86□□□□□ -2.27
NDE1Q9NXR1 MIR6779-201ENST00000617283 64 ntBASIC0.86□□□□□ -2.27
NDE1Q9NXR1 MIR6717-201ENST00000622747 73 ntBASIC0.86□□□□□ -2.27
NDE1Q9NXR1 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms