Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 RNU6-1160P-201ENST00000384546 104 ntBASIC0.45□□□□□ -2.34
CHCHD3Q9NX63 MIR598-201ENST00000384868 97 ntBASIC0.45□□□□□ -2.34
CHCHD3Q9NX63 MIR6717-201ENST00000622747 73 ntBASIC0.45□□□□□ -2.34
CHCHD3Q9NX63 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.45□□□□□ -2.34
CHCHD3Q9NX63 Y_RNA.351-201ENST00000365436 96 ntBASIC0.44□□□□□ -2.34
CHCHD3Q9NX63 Y_RNA.574-201ENST00000384766 95 ntBASIC0.44□□□□□ -2.34
CHCHD3Q9NX63 MT-TT-201ENST00000387460 66 ntBASIC0.44□□□□□ -2.34
CHCHD3Q9NX63 MIR4714-201ENST00000580728 77 ntBASIC0.44□□□□□ -2.34
CHCHD3Q9NX63 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.44□□□□□ -2.34
CHCHD3Q9NX63 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.44□□□□□ -2.34
CHCHD3Q9NX63 RNU6-1309P-201ENST00000363305 108 ntBASIC0.43□□□□□ -2.34
CHCHD3Q9NX63 Y_RNA.176-201ENST00000363815 109 ntBASIC0.43□□□□□ -2.34
CHCHD3Q9NX63 MIR548H3-201ENST00000408771 118 ntBASIC0.43□□□□□ -2.34
CHCHD3Q9NX63 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.43□□□□□ -2.34
CHCHD3Q9NX63 AC092628.1-201ENST00000436250 252 ntBASIC0.43□□□□□ -2.34
CHCHD3Q9NX63 AL138752.1-201ENST00000452964 351 ntBASIC0.43□□□□□ -2.34
CHCHD3Q9NX63 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.43□□□□□ -2.34
CHCHD3Q9NX63 MIR30D-201ENST00000362283 70 ntBASIC0.42□□□□□ -2.34
CHCHD3Q9NX63 SNORA63-201ENST00000363450 132 ntBASIC0.42□□□□□ -2.34
CHCHD3Q9NX63 RNY1-201ENST00000364228 113 ntBASIC0.42□□□□□ -2.34
CHCHD3Q9NX63 SNORA20-201ENST00000384662 132 ntBASIC0.42□□□□□ -2.34
CHCHD3Q9NX63 SNORA26.6-201ENST00000391256 115 ntBASIC0.42□□□□□ -2.34
CHCHD3Q9NX63 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
CHCHD3Q9NX63 RNU6-893P-201ENST00000458841 100 ntBASIC0.42□□□□□ -2.34
CHCHD3Q9NX63 AP003327.1-201ENST00000529684 127 ntBASIC0.42□□□□□ -2.34
CHCHD3Q9NX63 AP003072.1-201ENST00000531740 145 ntBASIC0.42□□□□□ -2.34
CHCHD3Q9NX63 AL442067.1-201ENST00000613261 223 ntBASIC0.42□□□□□ -2.34
CHCHD3Q9NX63 uc_338.6-201ENST00000613544 171 ntBASIC0.42□□□□□ -2.34
CHCHD3Q9NX63 AC092634.7-201ENST00000621022 103 ntBASIC0.42□□□□□ -2.34
CHCHD3Q9NX63 AL589743.1-201ENST00000551932 2712 ntBASIC0.41□□□□□ -2.34
CHCHD3Q9NX63 Y_RNA.23-201ENST00000362496 106 ntBASIC0.41□□□□□ -2.34
CHCHD3Q9NX63 Y_RNA.118-201ENST00000363300 101 ntBASIC0.41□□□□□ -2.34
CHCHD3Q9NX63 Y_RNA.145-201ENST00000363527 102 ntBASIC0.41□□□□□ -2.34
CHCHD3Q9NX63 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
CHCHD3Q9NX63 SNORA1-201ENST00000384107 130 ntBASIC0.41□□□□□ -2.34
CHCHD3Q9NX63 Y_RNA.515-201ENST00000384535 112 ntBASIC0.41□□□□□ -2.34
CHCHD3Q9NX63 MIR548F4-201ENST00000408515 105 ntBASIC0.41□□□□□ -2.34
CHCHD3Q9NX63 RPL39P25-201ENST00000449384 154 ntBASIC0.41□□□□□ -2.34
CHCHD3Q9NX63 RNU7-102P-201ENST00000458948 62 ntBASIC0.41□□□□□ -2.34
CHCHD3Q9NX63 SNORD116-25-201ENST00000516517 92 ntBASIC0.41□□□□□ -2.34
CHCHD3Q9NX63 RNU6-453P-201ENST00000516819 85 ntBASIC0.41□□□□□ -2.34
CHCHD3Q9NX63 RNU7-70P-201ENST00000516941 66 ntBASIC0.41□□□□□ -2.34
CHCHD3Q9NX63 RNU7-156P-201ENST00000517214 74 ntBASIC0.41□□□□□ -2.34
CHCHD3Q9NX63 AL162730.1-201ENST00000605734 292 ntBASIC0.41□□□□□ -2.34
CHCHD3Q9NX63 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.41□□□□□ -2.34
CHCHD3Q9NX63 Y_RNA.483-201ENST00000384380 101 ntBASIC0.4□□□□□ -2.35
CHCHD3Q9NX63 SNORD71-201ENST00000411292 86 ntBASIC0.4□□□□□ -2.35
CHCHD3Q9NX63 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.4□□□□□ -2.35
CHCHD3Q9NX63 AC015818.7-201ENST00000428754 109 ntBASIC0.4□□□□□ -2.35
CHCHD3Q9NX63 AC087499.7-201ENST00000441958 109 ntBASIC0.4□□□□□ -2.35
CHCHD3Q9NX63 AC002350.1-201ENST00000490759 375 ntBASIC0.4□□□□□ -2.35
CHCHD3Q9NX63 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.4□□□□□ -2.35
CHCHD3Q9NX63 AC091932.4-201ENST00000623386 200 ntBASIC0.4□□□□□ -2.35
CHCHD3Q9NX63 MIR342-201ENST00000362212 99 ntBASIC0.39□□□□□ -2.35
CHCHD3Q9NX63 Y_RNA.326-201ENST00000365176 113 ntBASIC0.39□□□□□ -2.35
CHCHD3Q9NX63 MIR216A-201ENST00000385063 110 ntBASIC0.39□□□□□ -2.35
CHCHD3Q9NX63 SNORD12C-201ENST00000386307 89 ntBASIC0.39□□□□□ -2.35
CHCHD3Q9NX63 RNA5SP237-201ENST00000410414 113 ntBASIC0.39□□□□□ -2.35
CHCHD3Q9NX63 RNU6-1190P-201ENST00000410811 104 ntBASIC0.39□□□□□ -2.35
CHCHD3Q9NX63 RNU6-651P-201ENST00000411040 105 ntBASIC0.39□□□□□ -2.35
CHCHD3Q9NX63 RNU6-448P-201ENST00000517052 107 ntBASIC0.39□□□□□ -2.35
CHCHD3Q9NX63 MIR3129-201ENST00000581095 76 ntBASIC0.39□□□□□ -2.35
CHCHD3Q9NX63 MIR4744-201ENST00000581563 82 ntBASIC0.39□□□□□ -2.35
CHCHD3Q9NX63 AL662814.1-201ENST00000617364 121 ntBASIC0.39□□□□□ -2.35
CHCHD3Q9NX63 Y_RNA.121-201ENST00000363309 113 ntBASIC0.38□□□□□ -2.35
CHCHD3Q9NX63 RNA5SP117-201ENST00000365294 118 ntBASIC0.38□□□□□ -2.35
CHCHD3Q9NX63 RNY1P8-201ENST00000383970 114 ntBASIC0.38□□□□□ -2.35
CHCHD3Q9NX63 RNU6-472P-201ENST00000384299 107 ntBASIC0.38□□□□□ -2.35
CHCHD3Q9NX63 MT-TW-201ENST00000387382 68 ntBASIC0.38□□□□□ -2.35
CHCHD3Q9NX63 RNU6-863P-201ENST00000515989 104 ntBASIC0.38□□□□□ -2.35
CHCHD3Q9NX63 AL117187.1-201ENST00000555482 181 ntBASIC0.38□□□□□ -2.35
CHCHD3Q9NX63 Y_RNA.812-201ENST00000610788 101 ntBASIC0.38□□□□□ -2.35
CHCHD3Q9NX63 Y_RNA.784-201ENST00000613803 101 ntBASIC0.38□□□□□ -2.35
CHCHD3Q9NX63 Y_RNA.787-201ENST00000616522 101 ntBASIC0.38□□□□□ -2.35
CHCHD3Q9NX63 Y_RNA.780-201ENST00000617336 101 ntBASIC0.38□□□□□ -2.35
CHCHD3Q9NX63 Y_RNA.801-201ENST00000619005 101 ntBASIC0.38□□□□□ -2.35
CHCHD3Q9NX63 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.38□□□□□ -2.35
CHCHD3Q9NX63 AC243829.3-201ENST00000622177 108 ntBASIC0.38□□□□□ -2.35
CHCHD3Q9NX63 MIRLET7D-201ENST00000362263 87 ntBASIC0.37□□□□□ -2.35
CHCHD3Q9NX63 RNU6-238P-201ENST00000363313 106 ntBASIC0.37□□□□□ -2.35
CHCHD3Q9NX63 Y_RNA.149-201ENST00000363558 117 ntBASIC0.37□□□□□ -2.35
CHCHD3Q9NX63 RNU6-1327P-201ENST00000365302 105 ntBASIC0.37□□□□□ -2.35
CHCHD3Q9NX63 Y_RNA.416-201ENST00000384014 113 ntBASIC0.37□□□□□ -2.35
CHCHD3Q9NX63 Y_RNA.556-201ENST00000384677 113 ntBASIC0.37□□□□□ -2.35
CHCHD3Q9NX63 SNORA40.8-201ENST00000411034 126 ntBASIC0.37□□□□□ -2.35
CHCHD3Q9NX63 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.37□□□□□ -2.35
CHCHD3Q9NX63 RNU6-135P-201ENST00000516769 101 ntBASIC0.37□□□□□ -2.35
CHCHD3Q9NX63 AC243829.6-201ENST00000612652 106 ntBASIC0.37□□□□□ -2.35
CHCHD3Q9NX63 RNU6-1099P-201ENST00000363533 107 ntBASIC0.36□□□□□ -2.35
CHCHD3Q9NX63 SNORD114-23-201ENST00000363536 72 ntBASIC0.36□□□□□ -2.35
CHCHD3Q9NX63 MIR936-201ENST00000401264 98 ntBASIC0.36□□□□□ -2.35
CHCHD3Q9NX63 RNA5SP127-201ENST00000411051 133 ntBASIC0.36□□□□□ -2.35
CHCHD3Q9NX63 SNORA68.3-201ENST00000515906 83 ntBASIC0.36□□□□□ -2.35
CHCHD3Q9NX63 RNU6-1153P-201ENST00000516760 105 ntBASIC0.36□□□□□ -2.35
CHCHD3Q9NX63 AC010487.4-201ENST00000637027 61 ntBASIC0.36□□□□□ -2.35
CHCHD3Q9NX63 Y_RNA.288-201ENST00000364854 92 ntBASIC0.35□□□□□ -2.35
CHCHD3Q9NX63 Y_RNA.292-201ENST00000364904 97 ntBASIC0.35□□□□□ -2.35
CHCHD3Q9NX63 Y_RNA.512-201ENST00000384518 102 ntBASIC0.35□□□□□ -2.35
CHCHD3Q9NX63 MIR606-201ENST00000384851 96 ntBASIC0.35□□□□□ -2.35
CHCHD3Q9NX63 MIR624-201ENST00000385217 97 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms