Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 RNU2-11P-201ENST00000459191 187 ntBASIC0.94□□□□□ -2.26
SMC4Q9NTJ3 RNU7-45P-201ENST00000459460 63 ntBASIC0.94□□□□□ -2.26
SMC4Q9NTJ3 AC113410.1-201ENST00000505029 247 ntBASIC0.94□□□□□ -2.26
SMC4Q9NTJ3 Y_RNA.797-201ENST00000515977 94 ntBASIC0.94□□□□□ -2.26
SMC4Q9NTJ3 RNU4-71P-201ENST00000516258 113 ntBASIC0.94□□□□□ -2.26
SMC4Q9NTJ3 MIR4653-201ENST00000585107 83 ntBASIC0.94□□□□□ -2.26
SMC4Q9NTJ3 AL353765.1-201ENST00000605514 183 ntBASIC0.94□□□□□ -2.26
SMC4Q9NTJ3 AL136317.1-201ENST00000612653 226 ntBASIC0.94□□□□□ -2.26
SMC4Q9NTJ3 U6.106-201ENST00000636360 105 ntBASIC0.94□□□□□ -2.26
SMC4Q9NTJ3 AC023934.1-201ENST00000574529 2389 ntBASIC0.94□□□□□ -2.26
SMC4Q9NTJ3 RNA5SP325-201ENST00000363756 130 ntBASIC0.93□□□□□ -2.26
SMC4Q9NTJ3 Y_RNA.410-201ENST00000383992 113 ntBASIC0.93□□□□□ -2.26
SMC4Q9NTJ3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
SMC4Q9NTJ3 SNORD89-201ENST00000390981 114 ntBASIC0.93□□□□□ -2.26
SMC4Q9NTJ3 PSMC1P5-201ENST00000512850 177 ntBASIC0.93□□□□□ -2.26
SMC4Q9NTJ3 RNU6-998P-201ENST00000515894 101 ntBASIC0.93□□□□□ -2.26
SMC4Q9NTJ3 RNU1-133P-201ENST00000364867 167 ntBASIC0.92□□□□□ -2.26
SMC4Q9NTJ3 RNU6-580P-201ENST00000365159 107 ntBASIC0.92□□□□□ -2.26
SMC4Q9NTJ3 RNU6-1336P-201ENST00000383886 109 ntBASIC0.92□□□□□ -2.26
SMC4Q9NTJ3 Y_RNA.412-201ENST00000384001 104 ntBASIC0.92□□□□□ -2.26
SMC4Q9NTJ3 AC022559.1-201ENST00000520905 205 ntBASIC0.92□□□□□ -2.26
SMC4Q9NTJ3 AC004817.2-201ENST00000561794 651 ntBASIC0.92□□□□□ -2.26
SMC4Q9NTJ3 AC130289.1-201ENST00000577321 73 ntBASIC0.92□□□□□ -2.26
SMC4Q9NTJ3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SMC4Q9NTJ3 RNU6-369P-201ENST00000362515 102 ntBASIC0.91□□□□□ -2.26
SMC4Q9NTJ3 Y_RNA.205-201ENST00000364128 113 ntBASIC0.91□□□□□ -2.26
SMC4Q9NTJ3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SMC4Q9NTJ3 RNU6-994P-201ENST00000410507 111 ntBASIC0.91□□□□□ -2.26
SMC4Q9NTJ3 AC006461.1-201ENST00000412637 326 ntBASIC0.91□□□□□ -2.26
SMC4Q9NTJ3 MIR378D2-201ENST00000580636 98 ntBASIC0.91□□□□□ -2.26
SMC4Q9NTJ3 RN7SL793P-201ENST00000583259 296 ntBASIC0.91□□□□□ -2.26
SMC4Q9NTJ3 MIR6835-201ENST00000621552 64 ntBASIC0.91□□□□□ -2.26
SMC4Q9NTJ3 Z97988.1-201ENST00000637697 135 ntBASIC0.91□□□□□ -2.26
SMC4Q9NTJ3 MIR411-201ENST00000362239 96 ntBASIC0.9□□□□□ -2.27
SMC4Q9NTJ3 Y_RNA.121-201ENST00000363309 113 ntBASIC0.9□□□□□ -2.27
SMC4Q9NTJ3 Y_RNA.200-201ENST00000364018 102 ntBASIC0.9□□□□□ -2.27
SMC4Q9NTJ3 Y_RNA.351-201ENST00000365436 96 ntBASIC0.9□□□□□ -2.27
SMC4Q9NTJ3 RNU4-70P-201ENST00000384579 139 ntBASIC0.9□□□□□ -2.27
SMC4Q9NTJ3 SNORA79-201ENST00000408376 140 ntBASIC0.9□□□□□ -2.27
SMC4Q9NTJ3 MIR1827-201ENST00000408549 66 ntBASIC0.9□□□□□ -2.27
SMC4Q9NTJ3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.9□□□□□ -2.27
SMC4Q9NTJ3 RNU6-602P-201ENST00000411155 105 ntBASIC0.9□□□□□ -2.27
SMC4Q9NTJ3 SNORD83.1-201ENST00000411362 77 ntBASIC0.9□□□□□ -2.27
SMC4Q9NTJ3 SEPT7P4-201ENST00000437076 306 ntBASIC0.9□□□□□ -2.27
SMC4Q9NTJ3 AC009779.6-201ENST00000603972 165 ntBASIC0.9□□□□□ -2.27
SMC4Q9NTJ3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.9□□□□□ -2.27
SMC4Q9NTJ3 MIR6740-201ENST00000618268 113 ntBASIC0.9□□□□□ -2.27
SMC4Q9NTJ3 HSBP1P2-201ENST00000299671 229 ntBASIC0.89□□□□□ -2.27
SMC4Q9NTJ3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.89□□□□□ -2.27
SMC4Q9NTJ3 Y_RNA.83-201ENST00000363005 113 ntBASIC0.89□□□□□ -2.27
SMC4Q9NTJ3 Y_RNA.274-201ENST00000364714 101 ntBASIC0.89□□□□□ -2.27
SMC4Q9NTJ3 RNU6-110P-201ENST00000384508 104 ntBASIC0.89□□□□□ -2.27
SMC4Q9NTJ3 MIR216A-201ENST00000385063 110 ntBASIC0.89□□□□□ -2.27
SMC4Q9NTJ3 SNORA26.6-201ENST00000391256 115 ntBASIC0.89□□□□□ -2.27
SMC4Q9NTJ3 Y_RNA.618-201ENST00000410949 107 ntBASIC0.89□□□□□ -2.27
SMC4Q9NTJ3 RNU7-96P-201ENST00000459535 64 ntBASIC0.89□□□□□ -2.27
SMC4Q9NTJ3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.89□□□□□ -2.27
SMC4Q9NTJ3 MRPS18CP4-201ENST00000535821 231 ntBASIC0.89□□□□□ -2.27
SMC4Q9NTJ3 MIR4264-201ENST00000583520 66 ntBASIC0.89□□□□□ -2.27
SMC4Q9NTJ3 MIR5197-201ENST00000583721 112 ntBASIC0.89□□□□□ -2.27
SMC4Q9NTJ3 AL365205.2-201ENST00000594586 68 ntBASIC0.89□□□□□ -2.27
SMC4Q9NTJ3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
SMC4Q9NTJ3 RNU6-379P-201ENST00000363813 104 ntBASIC0.88□□□□□ -2.27
SMC4Q9NTJ3 RNU6-275P-201ENST00000364910 107 ntBASIC0.88□□□□□ -2.27
SMC4Q9NTJ3 Y_RNA.542-201ENST00000384641 111 ntBASIC0.88□□□□□ -2.27
SMC4Q9NTJ3 MIR100-201ENST00000385259 80 ntBASIC0.88□□□□□ -2.27
SMC4Q9NTJ3 SNORD12C-201ENST00000386307 89 ntBASIC0.88□□□□□ -2.27
SMC4Q9NTJ3 MIR548I3-201ENST00000408378 149 ntBASIC0.88□□□□□ -2.27
SMC4Q9NTJ3 SNORD116-25-201ENST00000516517 92 ntBASIC0.88□□□□□ -2.27
SMC4Q9NTJ3 RNU7-53P-201ENST00000516705 60 ntBASIC0.88□□□□□ -2.27
SMC4Q9NTJ3 AC133485.1-201ENST00000567176 124 ntBASIC0.88□□□□□ -2.27
SMC4Q9NTJ3 AC138907.6-201ENST00000568401 126 ntBASIC0.88□□□□□ -2.27
SMC4Q9NTJ3 AP000753.3-201ENST00000604083 169 ntBASIC0.88□□□□□ -2.27
SMC4Q9NTJ3 AL590095.2-201ENST00000604136 117 ntBASIC0.88□□□□□ -2.27
SMC4Q9NTJ3 AC078938.1-201ENST00000620993 318 ntBASIC0.88□□□□□ -2.27
SMC4Q9NTJ3 RNU6-597P-201ENST00000365620 102 ntBASIC0.87□□□□□ -2.27
SMC4Q9NTJ3 RNU6-1292P-201ENST00000383856 107 ntBASIC0.87□□□□□ -2.27
SMC4Q9NTJ3 RNU6-643P-201ENST00000384018 107 ntBASIC0.87□□□□□ -2.27
SMC4Q9NTJ3 RNY1P4-201ENST00000384595 115 ntBASIC0.87□□□□□ -2.27
SMC4Q9NTJ3 AL606490.4-201ENST00000423117 127 ntBASIC0.87□□□□□ -2.27
SMC4Q9NTJ3 RNU6-1271P-201ENST00000517049 105 ntBASIC0.87□□□□□ -2.27
SMC4Q9NTJ3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.87□□□□□ -2.27
SMC4Q9NTJ3 AC104465.1-201ENST00000611365 139 ntBASIC0.87□□□□□ -2.27
SMC4Q9NTJ3 AC091932.4-201ENST00000623386 200 ntBASIC0.87□□□□□ -2.27
SMC4Q9NTJ3 SNORD38B-201ENST00000384690 67 ntBASIC0.86□□□□□ -2.27
SMC4Q9NTJ3 MIR508-201ENST00000384857 115 ntBASIC0.86□□□□□ -2.27
SMC4Q9NTJ3 MTND5P15-201ENST00000434246 349 ntBASIC0.86□□□□□ -2.27
SMC4Q9NTJ3 RNU6-1219P-201ENST00000516143 112 ntBASIC0.86□□□□□ -2.27
SMC4Q9NTJ3 SCARNA15-202ENST00000516881 127 ntBASIC0.86□□□□□ -2.27
SMC4Q9NTJ3 MIR6717-201ENST00000622747 73 ntBASIC0.86□□□□□ -2.27
SMC4Q9NTJ3 SNORD38B-202ENST00000625943 69 ntBASIC0.86□□□□□ -2.27
SMC4Q9NTJ3 AL596211.1-201ENST00000569873 2277 ntBASIC0.86□□□□□ -2.27
SMC4Q9NTJ3 Y_RNA.75-201ENST00000362927 97 ntBASIC0.85□□□□□ -2.27
SMC4Q9NTJ3 Y_RNA.188-201ENST00000363952 111 ntBASIC0.85□□□□□ -2.27
SMC4Q9NTJ3 SNORA1.1-201ENST00000364671 133 ntBASIC0.85□□□□□ -2.27
SMC4Q9NTJ3 RNU6-934P-201ENST00000365154 107 ntBASIC0.85□□□□□ -2.27
SMC4Q9NTJ3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SMC4Q9NTJ3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.85□□□□□ -2.27
SMC4Q9NTJ3 SNORD99-201ENST00000408612 74 ntBASIC0.85□□□□□ -2.27
SMC4Q9NTJ3 RNU7-62P-201ENST00000458856 62 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 196.1 ms