Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 RNU1-133P-201ENST00000364867 167 ntBASIC0.93□□□□□ -2.26
POLR1BQ9H9Y6 MT-TG-201ENST00000387429 68 ntBASIC0.93□□□□□ -2.26
POLR1BQ9H9Y6 RNU6-994P-201ENST00000410507 111 ntBASIC0.93□□□□□ -2.26
POLR1BQ9H9Y6 RNA5SP261-201ENST00000410536 106 ntBASIC0.93□□□□□ -2.26
POLR1BQ9H9Y6 MIR3129-201ENST00000581095 76 ntBASIC0.93□□□□□ -2.26
POLR1BQ9H9Y6 RN7SL793P-201ENST00000583259 296 ntBASIC0.93□□□□□ -2.26
POLR1BQ9H9Y6 RNU6-978P-201ENST00000364371 103 ntBASIC0.92□□□□□ -2.26
POLR1BQ9H9Y6 SNORA1.1-201ENST00000364671 133 ntBASIC0.92□□□□□ -2.26
POLR1BQ9H9Y6 RNU6-643P-201ENST00000384018 107 ntBASIC0.92□□□□□ -2.26
POLR1BQ9H9Y6 RNU6-125P-201ENST00000384505 107 ntBASIC0.92□□□□□ -2.26
POLR1BQ9H9Y6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
POLR1BQ9H9Y6 RNU6-913P-201ENST00000390913 95 ntBASIC0.92□□□□□ -2.26
POLR1BQ9H9Y6 MIR548I3-201ENST00000408378 149 ntBASIC0.92□□□□□ -2.26
POLR1BQ9H9Y6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.92□□□□□ -2.26
POLR1BQ9H9Y6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.92□□□□□ -2.26
POLR1BQ9H9Y6 RNU2-11P-201ENST00000459191 187 ntBASIC0.92□□□□□ -2.26
POLR1BQ9H9Y6 ACA64.5-201ENST00000516207 127 ntBASIC0.92□□□□□ -2.26
POLR1BQ9H9Y6 MIR3973-201ENST00000579824 107 ntBASIC0.92□□□□□ -2.26
POLR1BQ9H9Y6 MIR411-201ENST00000362239 96 ntBASIC0.91□□□□□ -2.26
POLR1BQ9H9Y6 MIR216A-201ENST00000385063 110 ntBASIC0.91□□□□□ -2.26
POLR1BQ9H9Y6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.91□□□□□ -2.26
POLR1BQ9H9Y6 RPS3AP1-201ENST00000413190 320 ntBASIC0.91□□□□□ -2.26
POLR1BQ9H9Y6 MRPS18CP4-201ENST00000535821 231 ntBASIC0.91□□□□□ -2.26
POLR1BQ9H9Y6 RNU6-94P-201ENST00000607728 107 ntBASIC0.91□□□□□ -2.26
POLR1BQ9H9Y6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
POLR1BQ9H9Y6 MIR302B-201ENST00000362188 73 ntBASIC0.9□□□□□ -2.27
POLR1BQ9H9Y6 Y_RNA.351-201ENST00000365436 96 ntBASIC0.9□□□□□ -2.27
POLR1BQ9H9Y6 RNY1P4-201ENST00000384595 115 ntBASIC0.9□□□□□ -2.27
POLR1BQ9H9Y6 RNU6-918P-201ENST00000391219 106 ntBASIC0.9□□□□□ -2.27
POLR1BQ9H9Y6 RNU6-1020P-201ENST00000363684 107 ntBASIC0.89□□□□□ -2.27
POLR1BQ9H9Y6 Y_RNA.188-201ENST00000363952 111 ntBASIC0.89□□□□□ -2.27
POLR1BQ9H9Y6 MIR624-201ENST00000385217 97 ntBASIC0.89□□□□□ -2.27
POLR1BQ9H9Y6 snosnR66.1-201ENST00000391095 99 ntBASIC0.89□□□□□ -2.27
POLR1BQ9H9Y6 MIR1827-201ENST00000408549 66 ntBASIC0.89□□□□□ -2.27
POLR1BQ9H9Y6 RNA5SP95-201ENST00000410319 137 ntBASIC0.89□□□□□ -2.27
POLR1BQ9H9Y6 RNA5SP127-201ENST00000411051 133 ntBASIC0.89□□□□□ -2.27
POLR1BQ9H9Y6 RNU2-64P-201ENST00000411315 191 ntBASIC0.89□□□□□ -2.27
POLR1BQ9H9Y6 AC244023.1-201ENST00000426884 112 ntBASIC0.89□□□□□ -2.27
POLR1BQ9H9Y6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.89□□□□□ -2.27
POLR1BQ9H9Y6 AC242498.1-201ENST00000604134 111 ntBASIC0.89□□□□□ -2.27
POLR1BQ9H9Y6 AC141273.2-201ENST00000618989 130 ntBASIC0.89□□□□□ -2.27
POLR1BQ9H9Y6 MIR1-1-201ENST00000362147 71 ntBASIC0.88□□□□□ -2.27
POLR1BQ9H9Y6 SNORA25.7-201ENST00000364375 127 ntBASIC0.88□□□□□ -2.27
POLR1BQ9H9Y6 MIR608-201ENST00000384820 100 ntBASIC0.88□□□□□ -2.27
POLR1BQ9H9Y6 AC090844.1-201ENST00000422019 156 ntBASIC0.88□□□□□ -2.27
POLR1BQ9H9Y6 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
POLR1BQ9H9Y6 MIR4431-201ENST00000579990 94 ntBASIC0.88□□□□□ -2.27
POLR1BQ9H9Y6 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.88□□□□□ -2.27
POLR1BQ9H9Y6 RNU6-312P-201ENST00000364629 107 ntBASIC0.87□□□□□ -2.27
POLR1BQ9H9Y6 RNU6-597P-201ENST00000365620 102 ntBASIC0.87□□□□□ -2.27
POLR1BQ9H9Y6 Y_RNA.412-201ENST00000384001 104 ntBASIC0.87□□□□□ -2.27
POLR1BQ9H9Y6 Y_RNA.515-201ENST00000384535 112 ntBASIC0.87□□□□□ -2.27
POLR1BQ9H9Y6 RNU6-205P-201ENST00000390858 107 ntBASIC0.87□□□□□ -2.27
POLR1BQ9H9Y6 SNORD89-201ENST00000390981 114 ntBASIC0.87□□□□□ -2.27
POLR1BQ9H9Y6 RNU6-602P-201ENST00000411155 105 ntBASIC0.87□□□□□ -2.27
POLR1BQ9H9Y6 AL138752.1-201ENST00000452964 351 ntBASIC0.87□□□□□ -2.27
POLR1BQ9H9Y6 AC113410.1-201ENST00000505029 247 ntBASIC0.87□□□□□ -2.27
POLR1BQ9H9Y6 MIR3152-201ENST00000579801 74 ntBASIC0.87□□□□□ -2.27
POLR1BQ9H9Y6 MIR376A2-201ENST00000636782 80 ntBASIC0.87□□□□□ -2.27
POLR1BQ9H9Y6 Y_RNA.552-201ENST00000384665 112 ntBASIC0.86□□□□□ -2.27
POLR1BQ9H9Y6 RNU7-62P-201ENST00000458856 62 ntBASIC0.86□□□□□ -2.27
POLR1BQ9H9Y6 RNU7-70P-201ENST00000516941 66 ntBASIC0.86□□□□□ -2.27
POLR1BQ9H9Y6 RNU6-1271P-201ENST00000517049 105 ntBASIC0.86□□□□□ -2.27
POLR1BQ9H9Y6 AC091932.4-201ENST00000623386 200 ntBASIC0.86□□□□□ -2.27
POLR1BQ9H9Y6 U6.106-201ENST00000636360 105 ntBASIC0.86□□□□□ -2.27
POLR1BQ9H9Y6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
POLR1BQ9H9Y6 MIR342-201ENST00000362212 99 ntBASIC0.85□□□□□ -2.27
POLR1BQ9H9Y6 Y_RNA.430-201ENST00000384081 110 ntBASIC0.85□□□□□ -2.27
POLR1BQ9H9Y6 RPS26P5-201ENST00000418544 335 ntBASIC0.85□□□□□ -2.27
POLR1BQ9H9Y6 MIR18B-201ENST00000454574 71 ntBASIC0.85□□□□□ -2.27
POLR1BQ9H9Y6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.85□□□□□ -2.27
POLR1BQ9H9Y6 AC130289.1-201ENST00000577321 73 ntBASIC0.85□□□□□ -2.27
POLR1BQ9H9Y6 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
POLR1BQ9H9Y6 AL353765.1-201ENST00000605514 183 ntBASIC0.85□□□□□ -2.27
POLR1BQ9H9Y6 MIR6717-201ENST00000622747 73 ntBASIC0.85□□□□□ -2.27
POLR1BQ9H9Y6 RNU6-934P-201ENST00000365154 107 ntBASIC0.84□□□□□ -2.27
POLR1BQ9H9Y6 RNU6-1319P-201ENST00000390855 104 ntBASIC0.84□□□□□ -2.27
POLR1BQ9H9Y6 RNU6-747P-201ENST00000390928 104 ntBASIC0.84□□□□□ -2.27
POLR1BQ9H9Y6 RNU6-241P-201ENST00000391148 104 ntBASIC0.84□□□□□ -2.27
POLR1BQ9H9Y6 SNORA26.6-201ENST00000391256 115 ntBASIC0.84□□□□□ -2.27
POLR1BQ9H9Y6 RNU6-177P-201ENST00000411257 104 ntBASIC0.84□□□□□ -2.27
POLR1BQ9H9Y6 AC006461.1-201ENST00000412637 326 ntBASIC0.84□□□□□ -2.27
POLR1BQ9H9Y6 HMGN1P33-201ENST00000432945 451 ntBASIC0.84□□□□□ -2.27
POLR1BQ9H9Y6 snoU13.2-201ENST00000459201 104 ntBASIC0.84□□□□□ -2.27
POLR1BQ9H9Y6 PSMC1P5-201ENST00000512850 177 ntBASIC0.84□□□□□ -2.27
POLR1BQ9H9Y6 AC072026.1-201ENST00000605023 201 ntBASIC0.84□□□□□ -2.27
POLR1BQ9H9Y6 Y_RNA.233-201ENST00000364407 101 ntBASIC0.83□□□□□ -2.28
POLR1BQ9H9Y6 Y_RNA.476-201ENST00000384347 108 ntBASIC0.83□□□□□ -2.28
POLR1BQ9H9Y6 Y_RNA.521-201ENST00000384560 114 ntBASIC0.83□□□□□ -2.28
POLR1BQ9H9Y6 MIR100-201ENST00000385259 80 ntBASIC0.83□□□□□ -2.28
POLR1BQ9H9Y6 SNORD105-201ENST00000386910 85 ntBASIC0.83□□□□□ -2.28
POLR1BQ9H9Y6 AC004941.2-201ENST00000427009 228 ntBASIC0.83□□□□□ -2.28
POLR1BQ9H9Y6 SEPT7P4-201ENST00000437076 306 ntBASIC0.83□□□□□ -2.28
POLR1BQ9H9Y6 AC107027.2-201ENST00000512197 115 ntBASIC0.83□□□□□ -2.28
POLR1BQ9H9Y6 MIR4714-201ENST00000580728 77 ntBASIC0.83□□□□□ -2.28
POLR1BQ9H9Y6 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
POLR1BQ9H9Y6 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
POLR1BQ9H9Y6 RNU6-379P-201ENST00000363813 104 ntBASIC0.82□□□□□ -2.28
POLR1BQ9H9Y6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
POLR1BQ9H9Y6 MIR588-201ENST00000384900 83 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms