Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 RNU7-43P-201ENST00000516554 64 ntBASIC1.78□□□□□ -2.12
NDC1Q9BTX1 RNU6-1258P-201ENST00000516911 111 ntBASIC1.78□□□□□ -2.12
NDC1Q9BTX1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.78□□□□□ -2.12
NDC1Q9BTX1 MIR4764-201ENST00000580680 88 ntBASIC1.78□□□□□ -2.12
NDC1Q9BTX1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
NDC1Q9BTX1 SNORA22.1-201ENST00000362701 134 ntBASIC1.77□□□□□ -2.13
NDC1Q9BTX1 Y_RNA.49-201ENST00000362714 112 ntBASIC1.77□□□□□ -2.13
NDC1Q9BTX1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.77□□□□□ -2.13
NDC1Q9BTX1 SNORA51.10-201ENST00000384418 136 ntBASIC1.77□□□□□ -2.13
NDC1Q9BTX1 MIR30A-201ENST00000385092 71 ntBASIC1.77□□□□□ -2.13
NDC1Q9BTX1 AL451046.2-201ENST00000403074 277 ntBASIC1.77□□□□□ -2.13
NDC1Q9BTX1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.77□□□□□ -2.13
NDC1Q9BTX1 RNU7-6P-201ENST00000516845 62 ntBASIC1.77□□□□□ -2.13
NDC1Q9BTX1 DNAJC19P9-201ENST00000555084 351 ntBASIC1.77□□□□□ -2.13
NDC1Q9BTX1 AC015688.6-201ENST00000577737 104 ntBASIC1.77□□□□□ -2.13
NDC1Q9BTX1 MIR4448-201ENST00000584360 86 ntBASIC1.77□□□□□ -2.13
NDC1Q9BTX1 AP000942.3-201ENST00000603702 160 ntBASIC1.77□□□□□ -2.13
NDC1Q9BTX1 AL020996.3-201ENST00000606617 222 ntBASIC1.77□□□□□ -2.13
NDC1Q9BTX1 MIR6717-201ENST00000622747 73 ntBASIC1.77□□□□□ -2.13
NDC1Q9BTX1 RNU6-1014P-201ENST00000383940 103 ntBASIC1.76□□□□□ -2.13
NDC1Q9BTX1 MIR520C-201ENST00000385005 87 ntBASIC1.76□□□□□ -2.13
NDC1Q9BTX1 RNA5SP261-201ENST00000410536 106 ntBASIC1.76□□□□□ -2.13
NDC1Q9BTX1 HMGN2P19-201ENST00000425149 265 ntBASIC1.76□□□□□ -2.13
NDC1Q9BTX1 HMGN1P33-201ENST00000432945 451 ntBASIC1.76□□□□□ -2.13
NDC1Q9BTX1 RNU6-893P-201ENST00000458841 100 ntBASIC1.76□□□□□ -2.13
NDC1Q9BTX1 snoU13.9-201ENST00000458927 103 ntBASIC1.76□□□□□ -2.13
NDC1Q9BTX1 RNU7-113P-201ENST00000459273 62 ntBASIC1.76□□□□□ -2.13
NDC1Q9BTX1 RPL39P34-201ENST00000477141 156 ntBASIC1.76□□□□□ -2.13
NDC1Q9BTX1 RPS23P4-201ENST00000487908 423 ntBASIC1.76□□□□□ -2.13
NDC1Q9BTX1 MIR514B-201ENST00000516774 80 ntBASIC1.76□□□□□ -2.13
NDC1Q9BTX1 AC008133.2-201ENST00000624540 351 ntBASIC1.76□□□□□ -2.13
NDC1Q9BTX1 MIR6841-201ENST00000637129 72 ntBASIC1.76□□□□□ -2.13
NDC1Q9BTX1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
NDC1Q9BTX1 Y_RNA.163-201ENST00000363702 113 ntBASIC1.75□□□□□ -2.13
NDC1Q9BTX1 Y_RNA.323-201ENST00000365157 109 ntBASIC1.75□□□□□ -2.13
NDC1Q9BTX1 RNA5SP89-201ENST00000410300 108 ntBASIC1.75□□□□□ -2.13
NDC1Q9BTX1 RNA5SP489-201ENST00000410986 109 ntBASIC1.75□□□□□ -2.13
NDC1Q9BTX1 AC003989.2-201ENST00000440224 169 ntBASIC1.75□□□□□ -2.13
NDC1Q9BTX1 snoU13.16-201ENST00000459350 104 ntBASIC1.75□□□□□ -2.13
NDC1Q9BTX1 Y_RNA.676-201ENST00000516393 96 ntBASIC1.75□□□□□ -2.13
NDC1Q9BTX1 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.75□□□□□ -2.13
NDC1Q9BTX1 AL513534.2-201ENST00000603836 250 ntBASIC1.75□□□□□ -2.13
NDC1Q9BTX1 MIR8063-201ENST00000621930 81 ntBASIC1.75□□□□□ -2.13
NDC1Q9BTX1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
NDC1Q9BTX1 U8.6-201ENST00000364939 135 ntBASIC1.74□□□□□ -2.13
NDC1Q9BTX1 Y_RNA.430-201ENST00000384081 110 ntBASIC1.74□□□□□ -2.13
NDC1Q9BTX1 Y_RNA.470-201ENST00000384307 117 ntBASIC1.74□□□□□ -2.13
NDC1Q9BTX1 RNU6-168P-201ENST00000516189 101 ntBASIC1.74□□□□□ -2.13
NDC1Q9BTX1 AC068339.1-201ENST00000526965 141 ntBASIC1.74□□□□□ -2.13
NDC1Q9BTX1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.74□□□□□ -2.13
NDC1Q9BTX1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.74□□□□□ -2.13
NDC1Q9BTX1 RNU6-94P-201ENST00000607728 107 ntBASIC1.74□□□□□ -2.13
NDC1Q9BTX1 AC087741.2-201ENST00000619415 172 ntBASIC1.74□□□□□ -2.13
NDC1Q9BTX1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.74□□□□□ -2.13
NDC1Q9BTX1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.74□□□□□ -2.13
NDC1Q9BTX1 WWP1P1-201ENST00000466609 2769 ntBASIC1.74□□□□□ -2.13
NDC1Q9BTX1 SNORD115-2-201ENST00000362842 82 ntBASIC1.73□□□□□ -2.13
NDC1Q9BTX1 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
NDC1Q9BTX1 SNORD115-20-201ENST00000365099 82 ntBASIC1.73□□□□□ -2.13
NDC1Q9BTX1 Y_RNA.495-201ENST00000384435 112 ntBASIC1.73□□□□□ -2.13
NDC1Q9BTX1 MIR676-201ENST00000390702 67 ntBASIC1.73□□□□□ -2.13
NDC1Q9BTX1 MIR1302-5-201ENST00000408164 150 ntBASIC1.73□□□□□ -2.13
NDC1Q9BTX1 HSPE1P24-201ENST00000450782 238 ntBASIC1.73□□□□□ -2.13
NDC1Q9BTX1 AC113410.1-201ENST00000505029 247 ntBASIC1.73□□□□□ -2.13
NDC1Q9BTX1 MIR5009-201ENST00000578736 100 ntBASIC1.73□□□□□ -2.13
NDC1Q9BTX1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.73□□□□□ -2.13
NDC1Q9BTX1 AL096840.1-201ENST00000603287 93 ntBASIC1.73□□□□□ -2.13
NDC1Q9BTX1 MIR8055-201ENST00000610739 97 ntBASIC1.73□□□□□ -2.13
NDC1Q9BTX1 AC084768.2-201ENST00000622736 221 ntBASIC1.73□□□□□ -2.13
NDC1Q9BTX1 RNU6-1298P-201ENST00000362456 101 ntBASIC1.72□□□□□ -2.13
NDC1Q9BTX1 SNORA1.1-201ENST00000364671 133 ntBASIC1.72□□□□□ -2.13
NDC1Q9BTX1 RNU6-32P-201ENST00000383948 107 ntBASIC1.72□□□□□ -2.13
NDC1Q9BTX1 RNU6-13P-201ENST00000384248 107 ntBASIC1.72□□□□□ -2.13
NDC1Q9BTX1 RNU6-12P-201ENST00000384604 107 ntBASIC1.72□□□□□ -2.13
NDC1Q9BTX1 RNU6-41P-201ENST00000384741 107 ntBASIC1.72□□□□□ -2.13
NDC1Q9BTX1 RNU4-69P-201ENST00000410677 143 ntBASIC1.72□□□□□ -2.13
NDC1Q9BTX1 RPS3AP1-201ENST00000413190 320 ntBASIC1.72□□□□□ -2.13
NDC1Q9BTX1 AC005908.1-201ENST00000468701 347 ntBASIC1.72□□□□□ -2.13
NDC1Q9BTX1 RNU7-41P-201ENST00000515917 61 ntBASIC1.72□□□□□ -2.13
NDC1Q9BTX1 SNORA25.15-201ENST00000516487 89 ntBASIC1.72□□□□□ -2.13
NDC1Q9BTX1 RNA5SP33-201ENST00000516687 98 ntBASIC1.72□□□□□ -2.13
NDC1Q9BTX1 RNU6-922P-201ENST00000516753 99 ntBASIC1.72□□□□□ -2.13
NDC1Q9BTX1 MIR3198-2-201ENST00000577868 80 ntBASIC1.72□□□□□ -2.13
NDC1Q9BTX1 AL359851.1-201ENST00000569460 4997 ntBASIC1.72□□□□□ -2.13
NDC1Q9BTX1 SNORD33-201ENST00000362761 85 ntBASIC1.71□□□□□ -2.14
NDC1Q9BTX1 Y_RNA.299-201ENST00000364973 94 ntBASIC1.71□□□□□ -2.14
NDC1Q9BTX1 Y_RNA.309-201ENST00000365046 111 ntBASIC1.71□□□□□ -2.14
NDC1Q9BTX1 RNU6-756P-201ENST00000383997 107 ntBASIC1.71□□□□□ -2.14
NDC1Q9BTX1 SNORA51.5-201ENST00000384126 131 ntBASIC1.71□□□□□ -2.14
NDC1Q9BTX1 SNORD41-201ENST00000386967 70 ntBASIC1.71□□□□□ -2.14
NDC1Q9BTX1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.71□□□□□ -2.14
NDC1Q9BTX1 AC108729.3-201ENST00000513484 108 ntBASIC1.71□□□□□ -2.14
NDC1Q9BTX1 AL357312.1-201ENST00000603879 298 ntBASIC1.71□□□□□ -2.14
NDC1Q9BTX1 AL162726.3-218ENST00000636401 95 ntBASIC1.71□□□□□ -2.14
NDC1Q9BTX1 RNU6-766P-201ENST00000362478 107 ntBASIC1.7□□□□□ -2.14
NDC1Q9BTX1 Y_RNA.328-201ENST00000365208 113 ntBASIC1.7□□□□□ -2.14
NDC1Q9BTX1 MIR9-3-201ENST00000385084 90 ntBASIC1.7□□□□□ -2.14
NDC1Q9BTX1 RNU6-816P-201ENST00000390914 107 ntBASIC1.7□□□□□ -2.14
NDC1Q9BTX1 RNU6-1268P-201ENST00000391214 107 ntBASIC1.7□□□□□ -2.14
NDC1Q9BTX1 RNU6-1239P-201ENST00000391310 107 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 226.2 ms