Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 SNORD26-201ENST00000384147 75 ntBASIC1.27□□□□□ -2.21
PAAF1Q9BRP4 SNORD38B-201ENST00000384690 67 ntBASIC1.27□□□□□ -2.21
PAAF1Q9BRP4 MIR1185-1-201ENST00000408598 86 ntBASIC1.27□□□□□ -2.21
PAAF1Q9BRP4 HMGN1P33-201ENST00000432945 451 ntBASIC1.27□□□□□ -2.21
PAAF1Q9BRP4 RNU7-45P-201ENST00000459460 63 ntBASIC1.27□□□□□ -2.21
PAAF1Q9BRP4 RNU6-1212P-201ENST00000517023 104 ntBASIC1.27□□□□□ -2.21
PAAF1Q9BRP4 AL020996.3-201ENST00000606617 222 ntBASIC1.27□□□□□ -2.21
PAAF1Q9BRP4 SNORD38B-202ENST00000625943 69 ntBASIC1.27□□□□□ -2.21
PAAF1Q9BRP4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.26□□□□□ -2.21
PAAF1Q9BRP4 Y_RNA.488-201ENST00000384403 102 ntBASIC1.26□□□□□ -2.21
PAAF1Q9BRP4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.26□□□□□ -2.21
PAAF1Q9BRP4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.26□□□□□ -2.21
PAAF1Q9BRP4 AP000753.3-201ENST00000604083 169 ntBASIC1.26□□□□□ -2.21
PAAF1Q9BRP4 SEPT14P17-201ENST00000617978 177 ntBASIC1.26□□□□□ -2.21
PAAF1Q9BRP4 RNU4-16P-201ENST00000364737 141 ntBASIC1.25□□□□□ -2.21
PAAF1Q9BRP4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.25□□□□□ -2.21
PAAF1Q9BRP4 RNY1P6-201ENST00000384193 109 ntBASIC1.25□□□□□ -2.21
PAAF1Q9BRP4 SNORA75.2-201ENST00000391138 150 ntBASIC1.25□□□□□ -2.21
PAAF1Q9BRP4 SNORA75.3-201ENST00000391231 150 ntBASIC1.25□□□□□ -2.21
PAAF1Q9BRP4 RPS3AP1-201ENST00000413190 320 ntBASIC1.25□□□□□ -2.21
PAAF1Q9BRP4 SNORD79.1-201ENST00000516069 84 ntBASIC1.25□□□□□ -2.21
PAAF1Q9BRP4 RNU7-200P-201ENST00000516105 62 ntBASIC1.25□□□□□ -2.21
PAAF1Q9BRP4 RNU7-40P-201ENST00000516397 64 ntBASIC1.25□□□□□ -2.21
PAAF1Q9BRP4 Y_RNA.690-201ENST00000516603 95 ntBASIC1.25□□□□□ -2.21
PAAF1Q9BRP4 AP003716.2-201ENST00000528260 108 ntBASIC1.25□□□□□ -2.21
PAAF1Q9BRP4 MIR8055-201ENST00000610739 97 ntBASIC1.25□□□□□ -2.21
PAAF1Q9BRP4 MIR7974-201ENST00000615835 79 ntBASIC1.25□□□□□ -2.21
PAAF1Q9BRP4 MIR6767-201ENST00000637302 66 ntBASIC1.25□□□□□ -2.21
PAAF1Q9BRP4 AC008163.1-202ENST00000636004 2889 ntBASIC1.25□□□□□ -2.21
PAAF1Q9BRP4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.24□□□□□ -2.21
PAAF1Q9BRP4 Y_RNA.120-201ENST00000363304 110 ntBASIC1.24□□□□□ -2.21
PAAF1Q9BRP4 Y_RNA.343-201ENST00000365354 112 ntBASIC1.24□□□□□ -2.21
PAAF1Q9BRP4 Y_RNA.354-201ENST00000365448 111 ntBASIC1.24□□□□□ -2.21
PAAF1Q9BRP4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
PAAF1Q9BRP4 RNU6-460P-201ENST00000391158 108 ntBASIC1.24□□□□□ -2.21
PAAF1Q9BRP4 RNU6-1190P-201ENST00000410811 104 ntBASIC1.24□□□□□ -2.21
PAAF1Q9BRP4 AL392103.1-201ENST00000447000 198 ntBASIC1.24□□□□□ -2.21
PAAF1Q9BRP4 RNU7-90P-201ENST00000459216 62 ntBASIC1.24□□□□□ -2.21
PAAF1Q9BRP4 RNU6-255P-201ENST00000516957 105 ntBASIC1.24□□□□□ -2.21
PAAF1Q9BRP4 MIR6717-201ENST00000622747 73 ntBASIC1.24□□□□□ -2.21
PAAF1Q9BRP4 MIR6516-201ENST00000630554 81 ntBASIC1.24□□□□□ -2.21
PAAF1Q9BRP4 RNY1P11-201ENST00000363759 113 ntBASIC1.23□□□□□ -2.21
PAAF1Q9BRP4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.23□□□□□ -2.21
PAAF1Q9BRP4 Y_RNA.251-201ENST00000364551 99 ntBASIC1.23□□□□□ -2.21
PAAF1Q9BRP4 RNU6-915P-201ENST00000364943 103 ntBASIC1.23□□□□□ -2.21
PAAF1Q9BRP4 Y_RNA.355-201ENST00000365462 98 ntBASIC1.23□□□□□ -2.21
PAAF1Q9BRP4 MIR1302-7-201ENST00000408841 72 ntBASIC1.23□□□□□ -2.21
PAAF1Q9BRP4 RNU7-21P-201ENST00000459430 62 ntBASIC1.23□□□□□ -2.21
PAAF1Q9BRP4 MIR4452-201ENST00000583004 71 ntBASIC1.23□□□□□ -2.21
PAAF1Q9BRP4 AC021613.1-201ENST00000623880 111 ntBASIC1.23□□□□□ -2.21
PAAF1Q9BRP4 Z97988.1-201ENST00000637697 135 ntBASIC1.23□□□□□ -2.21
PAAF1Q9BRP4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 Y_RNA.116-201ENST00000363292 103 ntBASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 RNU1-93P-201ENST00000364704 169 ntBASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 RNU6-690P-201ENST00000365242 106 ntBASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 RNU6-1062P-201ENST00000383908 107 ntBASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 SNORA2B-201ENST00000384583 137 ntBASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 RNU6-1319P-201ENST00000390855 104 ntBASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 RNU6-747P-201ENST00000390928 104 ntBASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 SNORD12-201ENST00000391002 90 ntBASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 RNU6-241P-201ENST00000391148 104 ntBASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 RNU6-177P-201ENST00000411257 104 ntBASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 AC063976.4-201ENST00000421971 163 ntBASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 AC090844.1-201ENST00000422019 156 ntBASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 RNA5SP236-201ENST00000516169 116 ntBASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 Y_RNA.686-201ENST00000516548 134 ntBASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 AP001328.1-201ENST00000528550 176 ntBASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 AC023827.1-201ENST00000569247 97 ntBASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 HSPE1P19-201ENST00000603327 295 ntBASIC1.22□□□□□ -2.21
PAAF1Q9BRP4 RNU6-654P-201ENST00000364373 107 ntBASIC1.21□□□□□ -2.22
PAAF1Q9BRP4 Y_RNA.420-201ENST00000384043 110 ntBASIC1.21□□□□□ -2.22
PAAF1Q9BRP4 RNU6-125P-201ENST00000384505 107 ntBASIC1.21□□□□□ -2.22
PAAF1Q9BRP4 RNU6-205P-201ENST00000390858 107 ntBASIC1.21□□□□□ -2.22
PAAF1Q9BRP4 RNA5SP95-201ENST00000410319 137 ntBASIC1.21□□□□□ -2.22
PAAF1Q9BRP4 RNU6-893P-201ENST00000458841 100 ntBASIC1.21□□□□□ -2.22
PAAF1Q9BRP4 RNU6-346P-201ENST00000516288 111 ntBASIC1.21□□□□□ -2.22
PAAF1Q9BRP4 Y_RNA.692-201ENST00000516627 105 ntBASIC1.21□□□□□ -2.22
PAAF1Q9BRP4 AC011603.4-201ENST00000611325 277 ntBASIC1.21□□□□□ -2.22
PAAF1Q9BRP4 MIR7111-201ENST00000619751 72 ntBASIC1.21□□□□□ -2.22
PAAF1Q9BRP4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
PAAF1Q9BRP4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
PAAF1Q9BRP4 RNU6-309P-201ENST00000364573 106 ntBASIC1.2□□□□□ -2.22
PAAF1Q9BRP4 MIR569-201ENST00000385228 96 ntBASIC1.2□□□□□ -2.22
PAAF1Q9BRP4 AL603914.1-201ENST00000401964 204 ntBASIC1.2□□□□□ -2.22
PAAF1Q9BRP4 RNU6-613P-201ENST00000410412 108 ntBASIC1.2□□□□□ -2.22
PAAF1Q9BRP4 RNU6-602P-201ENST00000411155 105 ntBASIC1.2□□□□□ -2.22
PAAF1Q9BRP4 RNU7-197P-201ENST00000458836 62 ntBASIC1.2□□□□□ -2.22
PAAF1Q9BRP4 RNU6-426P-201ENST00000516464 97 ntBASIC1.2□□□□□ -2.22
PAAF1Q9BRP4 RNU2-60P-201ENST00000517290 128 ntBASIC1.2□□□□□ -2.22
PAAF1Q9BRP4 MIR4264-201ENST00000583520 66 ntBASIC1.2□□□□□ -2.22
PAAF1Q9BRP4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
PAAF1Q9BRP4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
PAAF1Q9BRP4 RNY1P5-201ENST00000383890 115 ntBASIC1.19□□□□□ -2.22
PAAF1Q9BRP4 Y_RNA.506-201ENST00000384494 102 ntBASIC1.19□□□□□ -2.22
PAAF1Q9BRP4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.19□□□□□ -2.22
PAAF1Q9BRP4 MT-TN-201ENST00000387400 73 ntBASIC1.19□□□□□ -2.22
PAAF1Q9BRP4 SNORA26.6-201ENST00000391256 115 ntBASIC1.19□□□□□ -2.22
PAAF1Q9BRP4 AC002429.1-201ENST00000437672 148 ntBASIC1.19□□□□□ -2.22
PAAF1Q9BRP4 RNA5SP272-201ENST00000516095 111 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 320.5 ms