Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.17□□□□□ -2.22
CLSTN3Q9BQT9 Y_RNA.272-201ENST00000364696 102 ntBASIC1.16□□□□□ -2.22
CLSTN3Q9BQT9 MIR19B1-201ENST00000384829 87 ntBASIC1.16□□□□□ -2.22
CLSTN3Q9BQT9 MIR1185-1-201ENST00000408598 86 ntBASIC1.16□□□□□ -2.22
CLSTN3Q9BQT9 AL392103.1-201ENST00000447000 198 ntBASIC1.16□□□□□ -2.22
CLSTN3Q9BQT9 RNU6-998P-201ENST00000515894 101 ntBASIC1.16□□□□□ -2.22
CLSTN3Q9BQT9 RNU6-113P-201ENST00000516653 101 ntBASIC1.16□□□□□ -2.22
CLSTN3Q9BQT9 RNA5SP325-201ENST00000363756 130 ntBASIC1.15□□□□□ -2.23
CLSTN3Q9BQT9 RNU1-124P-201ENST00000363861 145 ntBASIC1.15□□□□□ -2.23
CLSTN3Q9BQT9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.15□□□□□ -2.23
CLSTN3Q9BQT9 Y_RNA.351-201ENST00000365436 96 ntBASIC1.15□□□□□ -2.23
CLSTN3Q9BQT9 Y_RNA.363-201ENST00000365529 113 ntBASIC1.15□□□□□ -2.23
CLSTN3Q9BQT9 Y_RNA.555-201ENST00000384673 110 ntBASIC1.15□□□□□ -2.23
CLSTN3Q9BQT9 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.15□□□□□ -2.23
CLSTN3Q9BQT9 RNU6-1082P-201ENST00000364574 107 ntBASIC1.14□□□□□ -2.23
CLSTN3Q9BQT9 MIR200A-201ENST00000384875 90 ntBASIC1.14□□□□□ -2.23
CLSTN3Q9BQT9 MT-TN-201ENST00000387400 73 ntBASIC1.14□□□□□ -2.23
CLSTN3Q9BQT9 RNU6-394P-201ENST00000410735 107 ntBASIC1.14□□□□□ -2.23
CLSTN3Q9BQT9 AC002429.1-201ENST00000437672 148 ntBASIC1.14□□□□□ -2.23
CLSTN3Q9BQT9 RNA5SP404-201ENST00000517118 132 ntBASIC1.14□□□□□ -2.23
CLSTN3Q9BQT9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.14□□□□□ -2.23
CLSTN3Q9BQT9 MIR3646-201ENST00000578301 84 ntBASIC1.14□□□□□ -2.23
CLSTN3Q9BQT9 MIR548AO-201ENST00000579992 96 ntBASIC1.14□□□□□ -2.23
CLSTN3Q9BQT9 AP000753.3-201ENST00000604083 169 ntBASIC1.14□□□□□ -2.23
CLSTN3Q9BQT9 AC104465.1-201ENST00000611365 139 ntBASIC1.14□□□□□ -2.23
CLSTN3Q9BQT9 MIR3658-201ENST00000636291 56 ntBASIC1.14□□□□□ -2.23
CLSTN3Q9BQT9 AC008163.1-202ENST00000636004 2889 ntBASIC1.13□□□□□ -2.23
CLSTN3Q9BQT9 SNORD38B-201ENST00000384690 67 ntBASIC1.13□□□□□ -2.23
CLSTN3Q9BQT9 SNORA75.2-201ENST00000391138 150 ntBASIC1.13□□□□□ -2.23
CLSTN3Q9BQT9 SNORA75.3-201ENST00000391231 150 ntBASIC1.13□□□□□ -2.23
CLSTN3Q9BQT9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.13□□□□□ -2.23
CLSTN3Q9BQT9 RNU2-11P-201ENST00000459191 187 ntBASIC1.13□□□□□ -2.23
CLSTN3Q9BQT9 RPS23P4-201ENST00000487908 423 ntBASIC1.13□□□□□ -2.23
CLSTN3Q9BQT9 RN7SKP179-201ENST00000516126 217 ntBASIC1.13□□□□□ -2.23
CLSTN3Q9BQT9 DNAJC19P2-201ENST00000593340 302 ntBASIC1.13□□□□□ -2.23
CLSTN3Q9BQT9 SNORD38B-202ENST00000625943 69 ntBASIC1.13□□□□□ -2.23
CLSTN3Q9BQT9 MIR6844-201ENST00000637122 62 ntBASIC1.13□□□□□ -2.23
CLSTN3Q9BQT9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
CLSTN3Q9BQT9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CLSTN3Q9BQT9 SNORD111-201ENST00000408139 94 ntBASIC1.12□□□□□ -2.23
CLSTN3Q9BQT9 MIR548I3-201ENST00000408378 149 ntBASIC1.12□□□□□ -2.23
CLSTN3Q9BQT9 MIR1302-7-201ENST00000408841 72 ntBASIC1.12□□□□□ -2.23
CLSTN3Q9BQT9 RNU6-613P-201ENST00000410412 108 ntBASIC1.12□□□□□ -2.23
CLSTN3Q9BQT9 SCARNA15-202ENST00000516881 127 ntBASIC1.12□□□□□ -2.23
CLSTN3Q9BQT9 MIR3152-201ENST00000579801 74 ntBASIC1.12□□□□□ -2.23
CLSTN3Q9BQT9 SNORD114-21-201ENST00000606412 72 ntBASIC1.12□□□□□ -2.23
CLSTN3Q9BQT9 MIR342-201ENST00000362212 99 ntBASIC1.11□□□□□ -2.23
CLSTN3Q9BQT9 Y_RNA.180-201ENST00000363867 113 ntBASIC1.11□□□□□ -2.23
CLSTN3Q9BQT9 SNORD113.3-201ENST00000364630 78 ntBASIC1.11□□□□□ -2.23
CLSTN3Q9BQT9 SNORA1.1-201ENST00000364671 133 ntBASIC1.11□□□□□ -2.23
CLSTN3Q9BQT9 RNU6-1130P-201ENST00000365434 107 ntBASIC1.11□□□□□ -2.23
CLSTN3Q9BQT9 RNU6-804P-201ENST00000384286 107 ntBASIC1.11□□□□□ -2.23
CLSTN3Q9BQT9 SNORA75.5-201ENST00000391291 81 ntBASIC1.11□□□□□ -2.23
CLSTN3Q9BQT9 RNU6-588P-201ENST00000410281 105 ntBASIC1.11□□□□□ -2.23
CLSTN3Q9BQT9 RNU6-1149P-201ENST00000516810 97 ntBASIC1.11□□□□□ -2.23
CLSTN3Q9BQT9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.11□□□□□ -2.23
CLSTN3Q9BQT9 MIR4264-201ENST00000583520 66 ntBASIC1.11□□□□□ -2.23
CLSTN3Q9BQT9 MIR8055-201ENST00000610739 97 ntBASIC1.11□□□□□ -2.23
CLSTN3Q9BQT9 MIR6516-201ENST00000630554 81 ntBASIC1.11□□□□□ -2.23
CLSTN3Q9BQT9 MIR377-201ENST00000362145 69 ntBASIC1.1□□□□□ -2.23
CLSTN3Q9BQT9 MIR373-201ENST00000362273 69 ntBASIC1.1□□□□□ -2.23
CLSTN3Q9BQT9 RNU6-818P-201ENST00000364837 108 ntBASIC1.1□□□□□ -2.23
CLSTN3Q9BQT9 RNU1-133P-201ENST00000364867 167 ntBASIC1.1□□□□□ -2.23
CLSTN3Q9BQT9 SNORD114-24-201ENST00000365029 72 ntBASIC1.1□□□□□ -2.23
CLSTN3Q9BQT9 MT-TR-201ENST00000387439 65 ntBASIC1.1□□□□□ -2.23
CLSTN3Q9BQT9 RNU6-913P-201ENST00000390913 95 ntBASIC1.1□□□□□ -2.23
CLSTN3Q9BQT9 Y_RNA.580-201ENST00000391004 95 ntBASIC1.1□□□□□ -2.23
CLSTN3Q9BQT9 SNORD37.2-201ENST00000391075 66 ntBASIC1.1□□□□□ -2.23
CLSTN3Q9BQT9 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
CLSTN3Q9BQT9 FABP5P4-201ENST00000437203 171 ntBASIC1.1□□□□□ -2.23
CLSTN3Q9BQT9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.1□□□□□ -2.23
CLSTN3Q9BQT9 MIR3144-201ENST00000579460 79 ntBASIC1.1□□□□□ -2.23
CLSTN3Q9BQT9 Z97988.1-201ENST00000637697 135 ntBASIC1.1□□□□□ -2.23
CLSTN3Q9BQT9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.1□□□□□ -2.23
CLSTN3Q9BQT9 Y_RNA.8-201ENST00000362353 102 ntBASIC1.09□□□□□ -2.23
CLSTN3Q9BQT9 RNU6-449P-201ENST00000383914 107 ntBASIC1.09□□□□□ -2.23
CLSTN3Q9BQT9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.09□□□□□ -2.23
CLSTN3Q9BQT9 RNU6-893P-201ENST00000458841 100 ntBASIC1.09□□□□□ -2.23
CLSTN3Q9BQT9 AL020996.3-201ENST00000606617 222 ntBASIC1.09□□□□□ -2.23
CLSTN3Q9BQT9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.09□□□□□ -2.23
CLSTN3Q9BQT9 MTND5P32-201ENST00000560711 1802 ntBASIC1.09□□□□□ -2.23
CLSTN3Q9BQT9 Y_RNA.52-201ENST00000362760 96 ntBASIC1.08□□□□□ -2.24
CLSTN3Q9BQT9 Y_RNA.168-201ENST00000363740 102 ntBASIC1.08□□□□□ -2.24
CLSTN3Q9BQT9 RNY1P11-201ENST00000363759 113 ntBASIC1.08□□□□□ -2.24
CLSTN3Q9BQT9 Y_RNA.205-201ENST00000364128 113 ntBASIC1.08□□□□□ -2.24
CLSTN3Q9BQT9 SNORD116-18-201ENST00000383961 92 ntBASIC1.08□□□□□ -2.24
CLSTN3Q9BQT9 Y_RNA.497-201ENST00000384447 98 ntBASIC1.08□□□□□ -2.24
CLSTN3Q9BQT9 SNORA20-201ENST00000384662 132 ntBASIC1.08□□□□□ -2.24
CLSTN3Q9BQT9 MIR548I1-201ENST00000408810 149 ntBASIC1.08□□□□□ -2.24
CLSTN3Q9BQT9 MTATP6P21-201ENST00000440681 189 ntBASIC1.08□□□□□ -2.24
CLSTN3Q9BQT9 AC067940.1-201ENST00000458411 300 ntBASIC1.08□□□□□ -2.24
CLSTN3Q9BQT9 AC131055.1-201ENST00000584626 316 ntBASIC1.08□□□□□ -2.24
CLSTN3Q9BQT9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.08□□□□□ -2.24
CLSTN3Q9BQT9 AC106800.4-201ENST00000614905 153 ntBASIC1.08□□□□□ -2.24
CLSTN3Q9BQT9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.08□□□□□ -2.24
CLSTN3Q9BQT9 AC012676.2-201ENST00000619258 186 ntBASIC1.08□□□□□ -2.24
CLSTN3Q9BQT9 AC091932.4-201ENST00000623386 200 ntBASIC1.08□□□□□ -2.24
CLSTN3Q9BQT9 RNU6-151P-201ENST00000364158 107 ntBASIC1.07□□□□□ -2.24
CLSTN3Q9BQT9 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
CLSTN3Q9BQT9 RNU4-11P-201ENST00000365287 132 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 583.7 ms