Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RNY3P16-201ENST00000516338 101 ntBASIC0.44□□□□□ -2.34
COL21A1Q96P44 SNORA18.4-201ENST00000516440 124 ntBASIC0.44□□□□□ -2.34
COL21A1Q96P44 SNORD36C-201ENST00000516733 66 ntBASIC0.44□□□□□ -2.34
COL21A1Q96P44 MIR4514-201ENST00000581410 57 ntBASIC0.44□□□□□ -2.34
COL21A1Q96P44 AL353621.2-201ENST00000605340 133 ntBASIC0.44□□□□□ -2.34
COL21A1Q96P44 SNORD115-40-201ENST00000606510 82 ntBASIC0.44□□□□□ -2.34
COL21A1Q96P44 RNU6-94P-201ENST00000607728 107 ntBASIC0.44□□□□□ -2.34
COL21A1Q96P44 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.44□□□□□ -2.34
COL21A1Q96P44 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
COL21A1Q96P44 Y_RNA.199-201ENST00000364014 102 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 Y_RNA.262-201ENST00000364641 102 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 RNY3P5-201ENST00000384127 102 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 RNU6-125P-201ENST00000384505 107 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 Y_RNA.556-201ENST00000384677 113 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 AL078595.1-201ENST00000404458 226 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 RNU6-613P-201ENST00000410412 108 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 AC090844.1-201ENST00000422019 156 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 MTND3P2-201ENST00000438452 342 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 RNU7-67P-201ENST00000459003 62 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 AC107297.1-201ENST00000459991 176 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 Y_RNA.680-201ENST00000516441 93 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 RNA5SP153-201ENST00000516498 76 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 RNU6-504P-201ENST00000516568 104 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 MIR2115-201ENST00000516657 100 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 RNU6-126P-201ENST00000516685 103 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.43□□□□□ -2.34
COL21A1Q96P44 AC097639.2-201ENST00000603159 172 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 AP000942.4-201ENST00000604811 241 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 AC243829.6-201ENST00000612652 106 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 7SK.10-201ENST00000621414 298 ntBASIC0.43□□□□□ -2.34
COL21A1Q96P44 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.42□□□□□ -2.34
COL21A1Q96P44 Y_RNA.23-201ENST00000362496 106 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 Y_RNA.65-201ENST00000362846 100 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 Y_RNA.308-201ENST00000365043 101 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 RNY4P28-201ENST00000365281 93 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 RNU6-396P-201ENST00000365369 105 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 Y_RNA.350-201ENST00000365409 98 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 RNU6-574P-201ENST00000384265 107 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 SNORA27-201ENST00000384323 126 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 SNORA2B-201ENST00000384583 137 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 RNU6-913P-201ENST00000390913 95 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 SNORA40.5-201ENST00000391061 128 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 RNU1-119P-201ENST00000391122 165 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 RNA5SP63-201ENST00000391225 112 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 RNU6-493P-201ENST00000391321 108 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 MIR1302-3-201ENST00000408128 138 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 MIR1827-201ENST00000408549 66 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.42□□□□□ -2.34
COL21A1Q96P44 RNU6-958P-201ENST00000516995 106 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 MIR3128-201ENST00000581957 66 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 MIR4503-201ENST00000582187 83 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 AC062037.2-201ENST00000610137 73 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 AC134878.1-201ENST00000619901 243 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 MIR376A2-201ENST00000636782 80 ntBASIC0.42□□□□□ -2.34
COL21A1Q96P44 Y_RNA.20-201ENST00000362479 113 ntBASIC0.41□□□□□ -2.34
COL21A1Q96P44 Y_RNA.168-201ENST00000363740 102 ntBASIC0.41□□□□□ -2.34
COL21A1Q96P44 SNORA1-201ENST00000384107 130 ntBASIC0.41□□□□□ -2.34
COL21A1Q96P44 RNU6-205P-201ENST00000390858 107 ntBASIC0.41□□□□□ -2.34
COL21A1Q96P44 SNORD77.3-201ENST00000391113 65 ntBASIC0.41□□□□□ -2.34
COL21A1Q96P44 SNORA26-201ENST00000391286 122 ntBASIC0.41□□□□□ -2.34
COL21A1Q96P44 SNORD58.1-201ENST00000391313 66 ntBASIC0.41□□□□□ -2.34
COL21A1Q96P44 AL138752.1-201ENST00000452964 351 ntBASIC0.41□□□□□ -2.34
COL21A1Q96P44 snoU13.16-201ENST00000459350 104 ntBASIC0.41□□□□□ -2.34
COL21A1Q96P44 snoU13.21-201ENST00000459368 105 ntBASIC0.41□□□□□ -2.34
COL21A1Q96P44 RPS29P24-201ENST00000486345 171 ntBASIC0.41□□□□□ -2.34
COL21A1Q96P44 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.41□□□□□ -2.34
COL21A1Q96P44 RN7SKP12-201ENST00000516275 143 ntBASIC0.41□□□□□ -2.34
COL21A1Q96P44 MIR4636-201ENST00000582271 80 ntBASIC0.41□□□□□ -2.34
COL21A1Q96P44 RNU2-4P-201ENST00000606190 192 ntBASIC0.41□□□□□ -2.34
COL21A1Q96P44 U4.1-201ENST00000620349 87 ntBASIC0.41□□□□□ -2.34
COL21A1Q96P44 RNU6-103P-201ENST00000363686 107 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 Y_RNA.193-201ENST00000363979 102 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 RNU6-923P-201ENST00000364753 107 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 Y_RNA.307-201ENST00000365022 117 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 RNU6-728P-201ENST00000365375 104 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 RNU6-1189P-201ENST00000383958 107 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 Y_RNA.440-201ENST00000384120 114 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 Y_RNA.447-201ENST00000384184 113 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 RNU6-196P-201ENST00000384315 107 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 SNORD105-201ENST00000386910 85 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 RNU6-1190P-201ENST00000410811 104 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 Y_RNA.626-201ENST00000411288 95 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 AC244023.1-201ENST00000426884 112 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.4□□□□□ -2.35
COL21A1Q96P44 RNU7-73P-201ENST00000458743 63 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 MIR4308-201ENST00000580634 81 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 MIR3129-201ENST00000581095 76 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 MIR4744-201ENST00000581563 82 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 AC242498.1-201ENST00000604134 111 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 MIR8055-201ENST00000610739 97 ntBASIC0.4□□□□□ -2.35
COL21A1Q96P44 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.39□□□□□ -2.35
COL21A1Q96P44 MIR377-201ENST00000362145 69 ntBASIC0.39□□□□□ -2.35
COL21A1Q96P44 MIR1-1-201ENST00000362147 71 ntBASIC0.39□□□□□ -2.35
COL21A1Q96P44 MIR342-201ENST00000362212 99 ntBASIC0.39□□□□□ -2.35
COL21A1Q96P44 Y_RNA.7-201ENST00000362352 102 ntBASIC0.39□□□□□ -2.35
COL21A1Q96P44 RNU6-369P-201ENST00000362515 102 ntBASIC0.39□□□□□ -2.35
COL21A1Q96P44 RNU6-702P-201ENST00000364982 107 ntBASIC0.39□□□□□ -2.35
COL21A1Q96P44 RNU6-580P-201ENST00000365159 107 ntBASIC0.39□□□□□ -2.35
COL21A1Q96P44 RNU4-45P-201ENST00000365469 141 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 231 ms