Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 MIR588-201ENST00000384900 83 ntBASIC0.61□□□□□ -2.31
ZNF558Q96NG5 MIR563-201ENST00000385080 79 ntBASIC0.61□□□□□ -2.31
ZNF558Q96NG5 RNU6-177P-201ENST00000411257 104 ntBASIC0.61□□□□□ -2.31
ZNF558Q96NG5 RNU6-229P-201ENST00000516614 102 ntBASIC0.61□□□□□ -2.31
ZNF558Q96NG5 AC020891.4-201ENST00000605745 93 ntBASIC0.61□□□□□ -2.31
ZNF558Q96NG5 uc_338.6-201ENST00000613544 171 ntBASIC0.61□□□□□ -2.31
ZNF558Q96NG5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
ZNF558Q96NG5 Y_RNA.76-201ENST00000362931 109 ntBASIC0.6□□□□□ -2.31
ZNF558Q96NG5 RNU6-1292P-201ENST00000383856 107 ntBASIC0.6□□□□□ -2.31
ZNF558Q96NG5 Y_RNA.562-201ENST00000384695 113 ntBASIC0.6□□□□□ -2.31
ZNF558Q96NG5 MIR520H-201ENST00000385126 88 ntBASIC0.6□□□□□ -2.31
ZNF558Q96NG5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
ZNF558Q96NG5 SNORA79-201ENST00000408376 140 ntBASIC0.6□□□□□ -2.31
ZNF558Q96NG5 MIR548H3-201ENST00000408771 118 ntBASIC0.6□□□□□ -2.31
ZNF558Q96NG5 RNU6-1165P-201ENST00000410119 107 ntBASIC0.6□□□□□ -2.31
ZNF558Q96NG5 RNU6-1190P-201ENST00000410811 104 ntBASIC0.6□□□□□ -2.31
ZNF558Q96NG5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.6□□□□□ -2.31
ZNF558Q96NG5 AL138752.1-201ENST00000452964 351 ntBASIC0.6□□□□□ -2.31
ZNF558Q96NG5 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.6□□□□□ -2.31
ZNF558Q96NG5 SNORD127-201ENST00000458892 86 ntBASIC0.6□□□□□ -2.31
ZNF558Q96NG5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.6□□□□□ -2.31
ZNF558Q96NG5 RNU6-561P-201ENST00000516222 102 ntBASIC0.6□□□□□ -2.31
ZNF558Q96NG5 AC018659.1-201ENST00000551083 169 ntBASIC0.6□□□□□ -2.31
ZNF558Q96NG5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.6□□□□□ -2.31
ZNF558Q96NG5 MIR5197-201ENST00000583721 112 ntBASIC0.6□□□□□ -2.31
ZNF558Q96NG5 AL365205.2-201ENST00000594586 68 ntBASIC0.6□□□□□ -2.31
ZNF558Q96NG5 MIR5087-201ENST00000635826 76 ntBASIC0.6□□□□□ -2.31
ZNF558Q96NG5 MIR376A2-201ENST00000636782 80 ntBASIC0.6□□□□□ -2.31
ZNF558Q96NG5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
ZNF558Q96NG5 Y_RNA.7-201ENST00000362352 102 ntBASIC0.59□□□□□ -2.31
ZNF558Q96NG5 Y_RNA.277-201ENST00000364754 102 ntBASIC0.59□□□□□ -2.31
ZNF558Q96NG5 Y_RNA.292-201ENST00000364904 97 ntBASIC0.59□□□□□ -2.31
ZNF558Q96NG5 SNORA26.6-201ENST00000391256 115 ntBASIC0.59□□□□□ -2.31
ZNF558Q96NG5 AC015818.7-201ENST00000428754 109 ntBASIC0.59□□□□□ -2.31
ZNF558Q96NG5 AC087499.7-201ENST00000441958 109 ntBASIC0.59□□□□□ -2.31
ZNF558Q96NG5 RNU7-56P-201ENST00000458744 62 ntBASIC0.59□□□□□ -2.31
ZNF558Q96NG5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.59□□□□□ -2.31
ZNF558Q96NG5 AC010332.2-201ENST00000613083 1904 ntBASIC0.59□□□□□ -2.32
ZNF558Q96NG5 Y_RNA.288-201ENST00000364854 92 ntBASIC0.58□□□□□ -2.32
ZNF558Q96NG5 RNU4-45P-201ENST00000365469 141 ntBASIC0.58□□□□□ -2.32
ZNF558Q96NG5 Y_RNA.459-201ENST00000384251 102 ntBASIC0.58□□□□□ -2.32
ZNF558Q96NG5 RNA5SP261-201ENST00000410536 106 ntBASIC0.58□□□□□ -2.32
ZNF558Q96NG5 RNU2-38P-201ENST00000410856 79 ntBASIC0.58□□□□□ -2.32
ZNF558Q96NG5 RNA5SP222-201ENST00000411039 105 ntBASIC0.58□□□□□ -2.32
ZNF558Q96NG5 RNU7-80P-201ENST00000459562 61 ntBASIC0.58□□□□□ -2.32
ZNF558Q96NG5 AC004817.2-201ENST00000561794 651 ntBASIC0.58□□□□□ -2.32
ZNF558Q96NG5 MIR6717-201ENST00000622747 73 ntBASIC0.58□□□□□ -2.32
ZNF558Q96NG5 Y_RNA.54-201ENST00000362766 105 ntBASIC0.57□□□□□ -2.32
ZNF558Q96NG5 RNU6-1309P-201ENST00000363305 108 ntBASIC0.57□□□□□ -2.32
ZNF558Q96NG5 Y_RNA.351-201ENST00000365436 96 ntBASIC0.57□□□□□ -2.32
ZNF558Q96NG5 Y_RNA.556-201ENST00000384677 113 ntBASIC0.57□□□□□ -2.32
ZNF558Q96NG5 MT-TF-201ENST00000387314 71 ntBASIC0.57□□□□□ -2.32
ZNF558Q96NG5 Y_RNA.618-201ENST00000410949 107 ntBASIC0.57□□□□□ -2.32
ZNF558Q96NG5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.57□□□□□ -2.32
ZNF558Q96NG5 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
ZNF558Q96NG5 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
ZNF558Q96NG5 MIR3129-201ENST00000581095 76 ntBASIC0.57□□□□□ -2.32
ZNF558Q96NG5 MIR4744-201ENST00000581563 82 ntBASIC0.57□□□□□ -2.32
ZNF558Q96NG5 MIR924-201ENST00000638017 53 ntBASIC0.57□□□□□ -2.32
ZNF558Q96NG5 MIR302B-201ENST00000362188 73 ntBASIC0.56□□□□□ -2.32
ZNF558Q96NG5 RNY4P28-201ENST00000365281 93 ntBASIC0.56□□□□□ -2.32
ZNF558Q96NG5 Y_RNA.430-201ENST00000384081 110 ntBASIC0.56□□□□□ -2.32
ZNF558Q96NG5 Y_RNA.454-201ENST00000384224 113 ntBASIC0.56□□□□□ -2.32
ZNF558Q96NG5 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
ZNF558Q96NG5 SNORD12C-201ENST00000386307 89 ntBASIC0.56□□□□□ -2.32
ZNF558Q96NG5 SNORD58.1-201ENST00000391313 66 ntBASIC0.56□□□□□ -2.32
ZNF558Q96NG5 MIR938-201ENST00000401216 83 ntBASIC0.56□□□□□ -2.32
ZNF558Q96NG5 MIR30D-201ENST00000362283 70 ntBASIC0.55□□□□□ -2.32
ZNF558Q96NG5 RNU6-694P-201ENST00000364071 147 ntBASIC0.55□□□□□ -2.32
ZNF558Q96NG5 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
ZNF558Q96NG5 MIR125B2-201ENST00000385128 89 ntBASIC0.55□□□□□ -2.32
ZNF558Q96NG5 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
ZNF558Q96NG5 MIR342-201ENST00000362212 99 ntBASIC0.54□□□□□ -2.32
ZNF558Q96NG5 MIR18A-201ENST00000362310 71 ntBASIC0.54□□□□□ -2.32
ZNF558Q96NG5 SNORA36.2-201ENST00000384004 127 ntBASIC0.54□□□□□ -2.32
ZNF558Q96NG5 RNU6-1237P-201ENST00000384777 107 ntBASIC0.54□□□□□ -2.32
ZNF558Q96NG5 MIR140-201ENST00000385282 100 ntBASIC0.54□□□□□ -2.32
ZNF558Q96NG5 RNU6-1319P-201ENST00000390855 104 ntBASIC0.54□□□□□ -2.32
ZNF558Q96NG5 RNU6-747P-201ENST00000390928 104 ntBASIC0.54□□□□□ -2.32
ZNF558Q96NG5 RNU6-241P-201ENST00000391148 104 ntBASIC0.54□□□□□ -2.32
ZNF558Q96NG5 MTCYBP9-201ENST00000431021 303 ntBASIC0.54□□□□□ -2.32
ZNF558Q96NG5 RNU7-185P-201ENST00000459215 60 ntBASIC0.54□□□□□ -2.32
ZNF558Q96NG5 RN7SKP12-201ENST00000516275 143 ntBASIC0.54□□□□□ -2.32
ZNF558Q96NG5 MIR3612-201ENST00000579753 87 ntBASIC0.54□□□□□ -2.32
ZNF558Q96NG5 AL360085.1-201ENST00000604713 532 ntBASIC0.54□□□□□ -2.32
ZNF558Q96NG5 AC091932.4-201ENST00000623386 200 ntBASIC0.54□□□□□ -2.32
ZNF558Q96NG5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.53□□□□□ -2.32
ZNF558Q96NG5 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
ZNF558Q96NG5 Y_RNA.121-201ENST00000363309 113 ntBASIC0.53□□□□□ -2.32
ZNF558Q96NG5 Y_RNA.133-201ENST00000363428 110 ntBASIC0.53□□□□□ -2.32
ZNF558Q96NG5 RNU6-978P-201ENST00000364371 103 ntBASIC0.53□□□□□ -2.32
ZNF558Q96NG5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
ZNF558Q96NG5 RNU6-578P-201ENST00000390980 103 ntBASIC0.53□□□□□ -2.32
ZNF558Q96NG5 MIR1257-201ENST00000408490 117 ntBASIC0.53□□□□□ -2.32
ZNF558Q96NG5 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.53□□□□□ -2.32
ZNF558Q96NG5 AC114737.2-201ENST00000421583 173 ntBASIC0.53□□□□□ -2.32
ZNF558Q96NG5 AL121914.1-201ENST00000450188 156 ntBASIC0.53□□□□□ -2.32
ZNF558Q96NG5 Y_RNA.668-201ENST00000516233 93 ntBASIC0.53□□□□□ -2.32
ZNF558Q96NG5 SNORD116-25-201ENST00000516517 92 ntBASIC0.53□□□□□ -2.32
ZNF558Q96NG5 RNA5SP330-201ENST00000517096 96 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 275.5 ms