Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.45□□□□□ -2.18
TRIM43Q96BQ3 AC091932.4-201ENST00000623386 200 ntBASIC1.45□□□□□ -2.18
TRIM43Q96BQ3 SCARNA15-202ENST00000516881 127 ntBASIC1.44□□□□□ -2.18
TRIM43Q96BQ3 RNU6-255P-201ENST00000516957 105 ntBASIC1.44□□□□□ -2.18
TRIM43Q96BQ3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.44□□□□□ -2.18
TRIM43Q96BQ3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
TRIM43Q96BQ3 RNA5SP264-201ENST00000363115 107 ntBASIC1.43□□□□□ -2.18
TRIM43Q96BQ3 Y_RNA.215-201ENST00000364204 112 ntBASIC1.43□□□□□ -2.18
TRIM43Q96BQ3 RNA5SP436-201ENST00000516020 115 ntBASIC1.43□□□□□ -2.18
TRIM43Q96BQ3 RNU7-200P-201ENST00000516105 62 ntBASIC1.43□□□□□ -2.18
TRIM43Q96BQ3 SNORA25.12-201ENST00000516202 82 ntBASIC1.43□□□□□ -2.18
TRIM43Q96BQ3 MIR548X2-201ENST00000579776 100 ntBASIC1.43□□□□□ -2.18
TRIM43Q96BQ3 MIR548AO-201ENST00000579992 96 ntBASIC1.43□□□□□ -2.18
TRIM43Q96BQ3 Y_RNA.205-201ENST00000364128 113 ntBASIC1.42□□□□□ -2.18
TRIM43Q96BQ3 RNU6-1062P-201ENST00000383908 107 ntBASIC1.42□□□□□ -2.18
TRIM43Q96BQ3 MIR320A-201ENST00000385302 82 ntBASIC1.42□□□□□ -2.18
TRIM43Q96BQ3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.42□□□□□ -2.18
TRIM43Q96BQ3 RNA5SP261-201ENST00000410536 106 ntBASIC1.42□□□□□ -2.18
TRIM43Q96BQ3 snoU13.25-201ENST00000458945 104 ntBASIC1.42□□□□□ -2.18
TRIM43Q96BQ3 SNORD26-201ENST00000384147 75 ntBASIC1.41□□□□□ -2.18
TRIM43Q96BQ3 Y_RNA.488-201ENST00000384403 102 ntBASIC1.41□□□□□ -2.18
TRIM43Q96BQ3 Y_RNA.120-201ENST00000363304 110 ntBASIC1.4□□□□□ -2.19
TRIM43Q96BQ3 SNORA1.1-201ENST00000364671 133 ntBASIC1.4□□□□□ -2.19
TRIM43Q96BQ3 MIR222-201ENST00000384992 110 ntBASIC1.4□□□□□ -2.19
TRIM43Q96BQ3 RNU6-910P-201ENST00000390844 107 ntBASIC1.4□□□□□ -2.19
TRIM43Q96BQ3 RNU6-913P-201ENST00000390913 95 ntBASIC1.4□□□□□ -2.19
TRIM43Q96BQ3 RNU11-2P-201ENST00000516898 142 ntBASIC1.4□□□□□ -2.19
TRIM43Q96BQ3 SNORA70.22-201ENST00000517160 124 ntBASIC1.4□□□□□ -2.19
TRIM43Q96BQ3 Y_RNA.251-201ENST00000364551 99 ntBASIC1.39□□□□□ -2.19
TRIM43Q96BQ3 Y_RNA.343-201ENST00000365354 112 ntBASIC1.39□□□□□ -2.19
TRIM43Q96BQ3 RNU6-396P-201ENST00000365369 105 ntBASIC1.39□□□□□ -2.19
TRIM43Q96BQ3 RNY1P5-201ENST00000383890 115 ntBASIC1.39□□□□□ -2.19
TRIM43Q96BQ3 SNORA20-201ENST00000384662 132 ntBASIC1.39□□□□□ -2.19
TRIM43Q96BQ3 MIR2115-201ENST00000516657 100 ntBASIC1.39□□□□□ -2.19
TRIM43Q96BQ3 AP003716.2-201ENST00000528260 108 ntBASIC1.39□□□□□ -2.19
TRIM43Q96BQ3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.39□□□□□ -2.19
TRIM43Q96BQ3 AL020996.3-201ENST00000606617 222 ntBASIC1.39□□□□□ -2.19
TRIM43Q96BQ3 SNORA80D-201ENST00000384488 135 ntBASIC1.38□□□□□ -2.19
TRIM43Q96BQ3 MIR1185-1-201ENST00000408598 86 ntBASIC1.38□□□□□ -2.19
TRIM43Q96BQ3 AL591704.2-201ENST00000421658 181 ntBASIC1.38□□□□□ -2.19
TRIM43Q96BQ3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.38□□□□□ -2.19
TRIM43Q96BQ3 RNU7-197P-201ENST00000458836 62 ntBASIC1.38□□□□□ -2.19
TRIM43Q96BQ3 RNA5SP236-201ENST00000516169 116 ntBASIC1.38□□□□□ -2.19
TRIM43Q96BQ3 MIR3152-201ENST00000579801 74 ntBASIC1.38□□□□□ -2.19
TRIM43Q96BQ3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.38□□□□□ -2.19
TRIM43Q96BQ3 RNA5SP327-201ENST00000362494 101 ntBASIC1.37□□□□□ -2.19
TRIM43Q96BQ3 RNY1P11-201ENST00000363759 113 ntBASIC1.37□□□□□ -2.19
TRIM43Q96BQ3 RNY1P6-201ENST00000384193 109 ntBASIC1.37□□□□□ -2.19
TRIM43Q96BQ3 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
TRIM43Q96BQ3 MIR569-201ENST00000385228 96 ntBASIC1.37□□□□□ -2.19
TRIM43Q96BQ3 RNU6-460P-201ENST00000391158 108 ntBASIC1.37□□□□□ -2.19
TRIM43Q96BQ3 Y_RNA.690-201ENST00000516603 95 ntBASIC1.37□□□□□ -2.19
TRIM43Q96BQ3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.37□□□□□ -2.19
TRIM43Q96BQ3 AL022345.2-201ENST00000606307 135 ntBASIC1.37□□□□□ -2.19
TRIM43Q96BQ3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.36□□□□□ -2.19
TRIM43Q96BQ3 AL603914.1-201ENST00000401964 204 ntBASIC1.36□□□□□ -2.19
TRIM43Q96BQ3 MIR1302-7-201ENST00000408841 72 ntBASIC1.36□□□□□ -2.19
TRIM43Q96BQ3 HMGN1P33-201ENST00000432945 451 ntBASIC1.36□□□□□ -2.19
TRIM43Q96BQ3 AL392103.1-201ENST00000447000 198 ntBASIC1.36□□□□□ -2.19
TRIM43Q96BQ3 Z97988.1-201ENST00000637697 135 ntBASIC1.36□□□□□ -2.19
TRIM43Q96BQ3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TRIM43Q96BQ3 MIR26B-201ENST00000362251 77 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 SNORA25.8-201ENST00000364831 128 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 RNU6-915P-201ENST00000364943 103 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 Y_RNA.374-201ENST00000365606 101 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 Y_RNA.420-201ENST00000384043 110 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 SNORA25-201ENST00000384384 134 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 Y_RNA.506-201ENST00000384494 102 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 SNORD38B-201ENST00000384690 67 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 SNORA75.2-201ENST00000391138 150 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 SNORA75.3-201ENST00000391231 150 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 RNU6-1190P-201ENST00000410811 104 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 MRPL35P3-201ENST00000421557 364 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 RNU7-45P-201ENST00000459460 63 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 SNORD79.1-201ENST00000516069 84 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 Y_RNA.686-201ENST00000516548 134 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 Y_RNA.703-201ENST00000516846 111 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 RNU2-60P-201ENST00000517290 128 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 AP001328.1-201ENST00000528550 176 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 AC019288.1-201ENST00000557918 224 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 AP000753.3-201ENST00000604083 169 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 MIR8055-201ENST00000610739 97 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 AC011603.4-201ENST00000611325 277 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 SEPT14P17-201ENST00000617978 177 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 MIR6717-201ENST00000622747 73 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 AC021613.1-201ENST00000623880 111 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 SNORD38B-202ENST00000625943 69 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 MIR6516-201ENST00000630554 81 ntBASIC1.35□□□□□ -2.19
TRIM43Q96BQ3 RNU6-690P-201ENST00000365242 106 ntBASIC1.34□□□□□ -2.19
TRIM43Q96BQ3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.34□□□□□ -2.19
TRIM43Q96BQ3 SNORD12-201ENST00000391002 90 ntBASIC1.34□□□□□ -2.19
TRIM43Q96BQ3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.34□□□□□ -2.19
TRIM43Q96BQ3 RPS3AP1-201ENST00000413190 320 ntBASIC1.34□□□□□ -2.19
TRIM43Q96BQ3 RNU5E-3P-201ENST00000515913 68 ntBASIC1.34□□□□□ -2.19
TRIM43Q96BQ3 RNU6-346P-201ENST00000516288 111 ntBASIC1.34□□□□□ -2.19
TRIM43Q96BQ3 RNU6-426P-201ENST00000516464 97 ntBASIC1.34□□□□□ -2.19
TRIM43Q96BQ3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.33□□□□□ -2.2
TRIM43Q96BQ3 RNU4-16P-201ENST00000364737 141 ntBASIC1.33□□□□□ -2.2
TRIM43Q96BQ3 RNU6-939P-201ENST00000384634 107 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 283.8 ms