Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MTCO2P24-201ENST00000515611 426 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 MIR4514-201ENST00000581410 57 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 uc_338.6-201ENST00000613544 171 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 uc_338.17-201ENST00000619633 179 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.65-201ENST00000362846 100 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.162-201ENST00000363683 102 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 RNY4P3-201ENST00000365254 95 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 RNU6-211P-201ENST00000384047 107 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.547-201ENST00000384654 119 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 MIR518A1-201ENST00000385068 85 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 SNORA26-201ENST00000391286 122 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 SNORD127-201ENST00000458892 86 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 RNU2-4P-201ENST00000606190 192 ntBASIC0.43□□□□□ -2.34
SHROOM3Q8TF72 SNORD38B-201ENST00000384690 67 ntBASIC0.42□□□□□ -2.34
SHROOM3Q8TF72 RNU6-1237P-201ENST00000384777 107 ntBASIC0.42□□□□□ -2.34
SHROOM3Q8TF72 MIR520F-201ENST00000384824 87 ntBASIC0.42□□□□□ -2.34
SHROOM3Q8TF72 SNORD105-201ENST00000386910 85 ntBASIC0.42□□□□□ -2.34
SHROOM3Q8TF72 SNORA26.6-201ENST00000391256 115 ntBASIC0.42□□□□□ -2.34
SHROOM3Q8TF72 MTND2P23-201ENST00000422990 651 ntBASIC0.42□□□□□ -2.34
SHROOM3Q8TF72 FABP5P4-201ENST00000437203 171 ntBASIC0.42□□□□□ -2.34
SHROOM3Q8TF72 MTND3P2-201ENST00000438452 342 ntBASIC0.42□□□□□ -2.34
SHROOM3Q8TF72 RNU4-71P-201ENST00000516258 113 ntBASIC0.42□□□□□ -2.34
SHROOM3Q8TF72 AL662814.1-201ENST00000617364 121 ntBASIC0.42□□□□□ -2.34
SHROOM3Q8TF72 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.42□□□□□ -2.34
SHROOM3Q8TF72 SNORD38B-202ENST00000625943 69 ntBASIC0.42□□□□□ -2.34
SHROOM3Q8TF72 U6.104-201ENST00000637979 90 ntBASIC0.42□□□□□ -2.34
SHROOM3Q8TF72 MIR302B-201ENST00000362188 73 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.214-201ENST00000364201 112 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.351-201ENST00000365436 96 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.459-201ENST00000384251 102 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 SNORD61-201ENST00000384252 73 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 SNORA51.10-201ENST00000384418 136 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 MIR616-201ENST00000385293 97 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 RNU5E-9P-201ENST00000411164 104 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 RNU6-938P-201ENST00000411285 103 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 SNRPGP8-201ENST00000454064 226 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 RNU2-13P-201ENST00000515909 113 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.680-201ENST00000516441 93 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 MIR3129-201ENST00000581095 76 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 MIR6516-201ENST00000630554 81 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 MTND1P7-201ENST00000632801 297 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.203-201ENST00000364106 102 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 RNU6-574P-201ENST00000384265 107 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.476-201ENST00000384347 108 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 MIR626-201ENST00000385032 94 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 MIR1827-201ENST00000408549 66 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 AC244098.3-201ENST00000424803 96 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 AC087499.4-201ENST00000448505 178 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 RNY3P16-201ENST00000516338 101 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 MIR8055-201ENST00000610739 97 ntBASIC0.41□□□□□ -2.34
SHROOM3Q8TF72 Y_RNA.262-201ENST00000364641 102 ntBASIC0.4□□□□□ -2.35
SHROOM3Q8TF72 RNU6-326P-201ENST00000365480 107 ntBASIC0.4□□□□□ -2.35
SHROOM3Q8TF72 SNORA36.2-201ENST00000384004 127 ntBASIC0.4□□□□□ -2.35
SHROOM3Q8TF72 Y_RNA.571-201ENST00000384753 98 ntBASIC0.4□□□□□ -2.35
SHROOM3Q8TF72 Y_RNA.622-201ENST00000411091 108 ntBASIC0.4□□□□□ -2.35
SHROOM3Q8TF72 SEPT7P4-201ENST00000437076 306 ntBASIC0.4□□□□□ -2.35
SHROOM3Q8TF72 MTATP8P1-201ENST00000467115 207 ntBASIC0.4□□□□□ -2.35
SHROOM3Q8TF72 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.4□□□□□ -2.35
SHROOM3Q8TF72 Y_RNA.720-201ENST00000517166 92 ntBASIC0.4□□□□□ -2.35
SHROOM3Q8TF72 AP003327.1-201ENST00000529684 127 ntBASIC0.4□□□□□ -2.35
SHROOM3Q8TF72 AC011921.3-201ENST00000605540 361 ntBASIC0.4□□□□□ -2.35
SHROOM3Q8TF72 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 SNORD12-201ENST00000391002 90 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 RNA5SP25-201ENST00000410815 110 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 RPS26P5-201ENST00000418544 335 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 AC244023.1-201ENST00000426884 112 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 AL157398.1-201ENST00000452981 186 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 RNU7-102P-201ENST00000458948 62 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 U7.7-201ENST00000459276 60 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 RNU7-96P-201ENST00000459535 64 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 COX6CP6-201ENST00000490840 228 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 MTND5P34-201ENST00000568888 325 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 MIR4802-201ENST00000581881 80 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 MIR4282-201ENST00000583613 67 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 AC097639.2-201ENST00000603159 172 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 AC242498.1-201ENST00000604134 111 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 AL353621.2-201ENST00000605340 133 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 RNU6-1082P-201ENST00000364574 107 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 SNORA63C-201ENST00000364578 129 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 RNY1P8-201ENST00000383970 114 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 RNU6-1011P-201ENST00000384668 107 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 MIR573-201ENST00000384964 99 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 MIR1302-3-201ENST00000408128 138 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 RNU6-561P-201ENST00000516222 102 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 RNA5SP153-201ENST00000516498 76 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 RNU6-504P-201ENST00000516568 104 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 RNU6-448P-201ENST00000517052 107 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 MIR4771-2-201ENST00000577758 74 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 MIR4771-1-201ENST00000582617 74 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 AC131055.1-201ENST00000584626 316 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 Z83818.1-201ENST00000603584 150 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 MIR6718-201ENST00000616153 80 ntBASIC0.39□□□□□ -2.35
SHROOM3Q8TF72 AL596211.1-201ENST00000569873 2277 ntBASIC0.38□□□□□ -2.35
SHROOM3Q8TF72 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
SHROOM3Q8TF72 AC023934.1-201ENST00000574529 2389 ntBASIC0.38□□□□□ -2.35
SHROOM3Q8TF72 RNU6-597P-201ENST00000365620 102 ntBASIC0.38□□□□□ -2.35
SHROOM3Q8TF72 RNU6-1289P-201ENST00000384431 106 ntBASIC0.38□□□□□ -2.35
SHROOM3Q8TF72 MIR548H3-201ENST00000408771 118 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms