Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 RNU6-275P-201ENST00000364910 107 ntBASIC1.12□□□□□ -2.23
USP38Q8NB14 Y_RNA.351-201ENST00000365436 96 ntBASIC1.12□□□□□ -2.23
USP38Q8NB14 Y_RNA.412-201ENST00000384001 104 ntBASIC1.12□□□□□ -2.23
USP38Q8NB14 RNU6-643P-201ENST00000384018 107 ntBASIC1.12□□□□□ -2.23
USP38Q8NB14 RNU6-35P-201ENST00000384530 107 ntBASIC1.12□□□□□ -2.23
USP38Q8NB14 MIR19B1-201ENST00000384829 87 ntBASIC1.12□□□□□ -2.23
USP38Q8NB14 RNU6-994P-201ENST00000410507 111 ntBASIC1.12□□□□□ -2.23
USP38Q8NB14 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.12□□□□□ -2.23
USP38Q8NB14 RNU2-11P-201ENST00000459191 187 ntBASIC1.12□□□□□ -2.23
USP38Q8NB14 AC131055.1-201ENST00000584626 316 ntBASIC1.12□□□□□ -2.23
USP38Q8NB14 Y_RNA.274-201ENST00000364714 101 ntBASIC1.11□□□□□ -2.23
USP38Q8NB14 Y_RNA.297-201ENST00000364950 91 ntBASIC1.11□□□□□ -2.23
USP38Q8NB14 RNU6-716P-201ENST00000365621 103 ntBASIC1.11□□□□□ -2.23
USP38Q8NB14 Y_RNA.440-201ENST00000384120 114 ntBASIC1.11□□□□□ -2.23
USP38Q8NB14 Y_RNA.521-201ENST00000384560 114 ntBASIC1.11□□□□□ -2.23
USP38Q8NB14 Y_RNA.542-201ENST00000384641 111 ntBASIC1.11□□□□□ -2.23
USP38Q8NB14 Y_RNA.552-201ENST00000384665 112 ntBASIC1.11□□□□□ -2.23
USP38Q8NB14 MT-TG-201ENST00000387429 68 ntBASIC1.11□□□□□ -2.23
USP38Q8NB14 RNU6-205P-201ENST00000390858 107 ntBASIC1.11□□□□□ -2.23
USP38Q8NB14 AC022559.1-201ENST00000520905 205 ntBASIC1.11□□□□□ -2.23
USP38Q8NB14 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.11□□□□□ -2.23
USP38Q8NB14 AP000753.3-201ENST00000604083 169 ntBASIC1.11□□□□□ -2.23
USP38Q8NB14 AC103810.9-201ENST00000606688 112 ntBASIC1.11□□□□□ -2.23
USP38Q8NB14 RNU6-94P-201ENST00000607728 107 ntBASIC1.11□□□□□ -2.23
USP38Q8NB14 MIR8087-201ENST00000612745 78 ntBASIC1.11□□□□□ -2.23
USP38Q8NB14 RNU4-38P-201ENST00000364472 129 ntBASIC1.1□□□□□ -2.23
USP38Q8NB14 SNORA22-201ENST00000383907 134 ntBASIC1.1□□□□□ -2.23
USP38Q8NB14 SNORA24-201ENST00000384096 131 ntBASIC1.1□□□□□ -2.23
USP38Q8NB14 SNORA22C-201ENST00000384614 134 ntBASIC1.1□□□□□ -2.23
USP38Q8NB14 MIR532-201ENST00000385025 91 ntBASIC1.1□□□□□ -2.23
USP38Q8NB14 RNU6-913P-201ENST00000390913 95 ntBASIC1.1□□□□□ -2.23
USP38Q8NB14 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.1□□□□□ -2.23
USP38Q8NB14 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.1□□□□□ -2.23
USP38Q8NB14 RNU7-96P-201ENST00000459535 64 ntBASIC1.1□□□□□ -2.23
USP38Q8NB14 UBL5P1-201ENST00000507979 193 ntBASIC1.1□□□□□ -2.23
USP38Q8NB14 AC141273.2-201ENST00000618989 130 ntBASIC1.1□□□□□ -2.23
USP38Q8NB14 MIR6513-201ENST00000621188 64 ntBASIC1.1□□□□□ -2.23
USP38Q8NB14 SNORD114-23-201ENST00000363536 72 ntBASIC1.09□□□□□ -2.23
USP38Q8NB14 SNORD113.3-201ENST00000364630 78 ntBASIC1.09□□□□□ -2.23
USP38Q8NB14 SNORD114-24-201ENST00000365029 72 ntBASIC1.09□□□□□ -2.23
USP38Q8NB14 Y_RNA.793-201ENST00000411222 111 ntBASIC1.09□□□□□ -2.23
USP38Q8NB14 RNU6-998P-201ENST00000515894 101 ntBASIC1.09□□□□□ -2.23
USP38Q8NB14 RNU7-70P-201ENST00000516941 66 ntBASIC1.09□□□□□ -2.23
USP38Q8NB14 AC010487.4-201ENST00000637027 61 ntBASIC1.09□□□□□ -2.23
USP38Q8NB14 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
USP38Q8NB14 Y_RNA.75-201ENST00000362927 97 ntBASIC1.08□□□□□ -2.24
USP38Q8NB14 RNU6-125P-201ENST00000384505 107 ntBASIC1.08□□□□□ -2.24
USP38Q8NB14 MIR200A-201ENST00000384875 90 ntBASIC1.08□□□□□ -2.24
USP38Q8NB14 MIR936-201ENST00000401264 98 ntBASIC1.08□□□□□ -2.24
USP38Q8NB14 AC090844.1-201ENST00000422019 156 ntBASIC1.08□□□□□ -2.24
USP38Q8NB14 AC067940.1-201ENST00000458411 300 ntBASIC1.08□□□□□ -2.24
USP38Q8NB14 RNU7-73P-201ENST00000458743 63 ntBASIC1.08□□□□□ -2.24
USP38Q8NB14 Y_RNA.644-201ENST00000459006 113 ntBASIC1.08□□□□□ -2.24
USP38Q8NB14 Y_RNA.674-201ENST00000516362 113 ntBASIC1.08□□□□□ -2.24
USP38Q8NB14 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.08□□□□□ -2.24
USP38Q8NB14 AL365205.2-201ENST00000594586 68 ntBASIC1.08□□□□□ -2.24
USP38Q8NB14 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.08□□□□□ -2.24
USP38Q8NB14 MIR376A2-201ENST00000636782 80 ntBASIC1.08□□□□□ -2.24
USP38Q8NB14 AL391516.1-201ENST00000554380 2449 ntBASIC1.08□□□□□ -2.24
USP38Q8NB14 AL596211.1-201ENST00000569873 2277 ntBASIC1.08□□□□□ -2.24
USP38Q8NB14 RNU6-978P-201ENST00000364371 103 ntBASIC1.07□□□□□ -2.24
USP38Q8NB14 SNORA1.1-201ENST00000364671 133 ntBASIC1.07□□□□□ -2.24
USP38Q8NB14 SNORD38B-201ENST00000384690 67 ntBASIC1.07□□□□□ -2.24
USP38Q8NB14 SNORD111-201ENST00000408139 94 ntBASIC1.07□□□□□ -2.24
USP38Q8NB14 MIR548I3-201ENST00000408378 149 ntBASIC1.07□□□□□ -2.24
USP38Q8NB14 RNU6-613P-201ENST00000410412 108 ntBASIC1.07□□□□□ -2.24
USP38Q8NB14 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.07□□□□□ -2.24
USP38Q8NB14 PDCD5P2-201ENST00000507570 312 ntBASIC1.07□□□□□ -2.24
USP38Q8NB14 MRPS18CP4-201ENST00000535821 231 ntBASIC1.07□□□□□ -2.24
USP38Q8NB14 MIR4698-201ENST00000577795 80 ntBASIC1.07□□□□□ -2.24
USP38Q8NB14 MIR5197-201ENST00000583721 112 ntBASIC1.07□□□□□ -2.24
USP38Q8NB14 AC106800.4-201ENST00000614905 153 ntBASIC1.07□□□□□ -2.24
USP38Q8NB14 SNORD38B-202ENST00000625943 69 ntBASIC1.07□□□□□ -2.24
USP38Q8NB14 SNORA25.7-201ENST00000364375 127 ntBASIC1.06□□□□□ -2.24
USP38Q8NB14 Y_RNA.233-201ENST00000364407 101 ntBASIC1.06□□□□□ -2.24
USP38Q8NB14 Y_RNA.294-201ENST00000364916 102 ntBASIC1.06□□□□□ -2.24
USP38Q8NB14 FABP5P4-201ENST00000437203 171 ntBASIC1.06□□□□□ -2.24
USP38Q8NB14 RNU7-45P-201ENST00000459460 63 ntBASIC1.06□□□□□ -2.24
USP38Q8NB14 RNU7-80P-201ENST00000459562 61 ntBASIC1.06□□□□□ -2.24
USP38Q8NB14 RNU6-1219P-201ENST00000516143 112 ntBASIC1.06□□□□□ -2.24
USP38Q8NB14 AP002392.1-201ENST00000537692 208 ntBASIC1.06□□□□□ -2.24
USP38Q8NB14 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.06□□□□□ -2.24
USP38Q8NB14 RNU6-1292P-201ENST00000383856 107 ntBASIC1.05□□□□□ -2.24
USP38Q8NB14 RNU6-1336P-201ENST00000383886 109 ntBASIC1.05□□□□□ -2.24
USP38Q8NB14 SNORD89-201ENST00000390981 114 ntBASIC1.05□□□□□ -2.24
USP38Q8NB14 RNU6-1190P-201ENST00000410811 104 ntBASIC1.05□□□□□ -2.24
USP38Q8NB14 RNA5SP127-201ENST00000411051 133 ntBASIC1.05□□□□□ -2.24
USP38Q8NB14 MIR4431-201ENST00000579990 94 ntBASIC1.05□□□□□ -2.24
USP38Q8NB14 RNU6-1187P-201ENST00000364771 110 ntBASIC1.04□□□□□ -2.24
USP38Q8NB14 MIR1197-201ENST00000408818 88 ntBASIC1.04□□□□□ -2.24
USP38Q8NB14 RNU6-138P-201ENST00000515952 107 ntBASIC1.04□□□□□ -2.24
USP38Q8NB14 MIR6086-201ENST00000638065 55 ntBASIC1.04□□□□□ -2.24
USP38Q8NB14 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
USP38Q8NB14 Y_RNA.435-201ENST00000384095 112 ntBASIC1.03□□□□□ -2.24
USP38Q8NB14 Y_RNA.454-201ENST00000384224 113 ntBASIC1.03□□□□□ -2.24
USP38Q8NB14 MTND5P15-201ENST00000434246 349 ntBASIC1.03□□□□□ -2.24
USP38Q8NB14 AC107027.2-201ENST00000512197 115 ntBASIC1.03□□□□□ -2.24
USP38Q8NB14 MIR4661-201ENST00000582720 75 ntBASIC1.03□□□□□ -2.24
USP38Q8NB14 MIR4264-201ENST00000583520 66 ntBASIC1.03□□□□□ -2.24
USP38Q8NB14 MIR8055-201ENST00000610739 97 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms