Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 PMCHL1-202ENST00000423102 261 ntBASIC-0.28□□□□□ -2.45
ZIC4Q8N9L1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.28□□□□□ -2.45
ZIC4Q8N9L1 RNU6-180P-201ENST00000516697 61 ntBASIC-0.28□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.28□□□□□ -2.45
ZIC4Q8N9L1 RPS29P30-201ENST00000600975 111 ntBASIC-0.28□□□□□ -2.45
ZIC4Q8N9L1 AC097639.2-201ENST00000603159 172 ntBASIC-0.28□□□□□ -2.45
ZIC4Q8N9L1 AL162376.1-201ENST00000624117 175 ntBASIC-0.28□□□□□ -2.45
ZIC4Q8N9L1 MIR342-201ENST00000362212 99 ntBASIC-0.29□□□□□ -2.46
ZIC4Q8N9L1 SNORD113-8-201ENST00000363497 74 ntBASIC-0.29□□□□□ -2.46
ZIC4Q8N9L1 RNU4-10P-201ENST00000364383 140 ntBASIC-0.29□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.29□□□□□ -2.46
ZIC4Q8N9L1 SNORA72.6-201ENST00000384520 129 ntBASIC-0.29□□□□□ -2.46
ZIC4Q8N9L1 SNORA8.3-201ENST00000384679 139 ntBASIC-0.29□□□□□ -2.46
ZIC4Q8N9L1 RNA5SP163-201ENST00000410304 99 ntBASIC-0.29□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.29□□□□□ -2.46
ZIC4Q8N9L1 RNU6-126P-201ENST00000516685 103 ntBASIC-0.29□□□□□ -2.46
ZIC4Q8N9L1 SNORA20.3-201ENST00000516880 132 ntBASIC-0.29□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.29□□□□□ -2.46
ZIC4Q8N9L1 MIR4645-201ENST00000583158 77 ntBASIC-0.29□□□□□ -2.46
ZIC4Q8N9L1 MIR3925-201ENST00000584674 77 ntBASIC-0.29□□□□□ -2.46
ZIC4Q8N9L1 AL008718.3-201ENST00000610217 321 ntBASIC-0.29□□□□□ -2.46
ZIC4Q8N9L1 AC007485.1-201ENST00000616755 206 ntBASIC-0.29□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.3□□□□□ -2.46
ZIC4Q8N9L1 SNORA63.5-201ENST00000363548 123 ntBASIC-0.3□□□□□ -2.46
ZIC4Q8N9L1 RNA5SP275-201ENST00000363936 118 ntBASIC-0.3□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.3□□□□□ -2.46
ZIC4Q8N9L1 RNY1P13-201ENST00000365030 105 ntBASIC-0.3□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.3□□□□□ -2.46
ZIC4Q8N9L1 SNORA1-201ENST00000384107 130 ntBASIC-0.3□□□□□ -2.46
ZIC4Q8N9L1 RNU6-35P-201ENST00000384530 107 ntBASIC-0.3□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.3□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.3□□□□□ -2.46
ZIC4Q8N9L1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
ZIC4Q8N9L1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
ZIC4Q8N9L1 AC096531.1-201ENST00000419107 107 ntBASIC-0.3□□□□□ -2.46
ZIC4Q8N9L1 SNORD4A-201ENST00000459174 72 ntBASIC-0.3□□□□□ -2.46
ZIC4Q8N9L1 RNA5SP395-201ENST00000516567 118 ntBASIC-0.3□□□□□ -2.46
ZIC4Q8N9L1 MIR8064-201ENST00000612863 90 ntBASIC-0.3□□□□□ -2.46
ZIC4Q8N9L1 AL138825.1-201ENST00000618587 192 ntBASIC-0.3□□□□□ -2.46
ZIC4Q8N9L1 AC091932.4-201ENST00000623386 200 ntBASIC-0.3□□□□□ -2.46
ZIC4Q8N9L1 SNORD114-28-201ENST00000363610 72 ntBASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 RNU6-652P-201ENST00000365488 107 ntBASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 MIR1912-201ENST00000410389 80 ntBASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 RNA5SP261-201ENST00000410536 106 ntBASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 RNU6-475P-201ENST00000516073 104 ntBASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 AC040926.1-201ENST00000530195 238 ntBASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 AP003072.1-201ENST00000531740 145 ntBASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 MIR5688-201ENST00000580619 83 ntBASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 MIR4677-201ENST00000584153 80 ntBASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.31□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.32□□□□□ -2.46
ZIC4Q8N9L1 SNORA18.1-201ENST00000363418 128 ntBASIC-0.32□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.32□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.32□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.32□□□□□ -2.46
ZIC4Q8N9L1 RNU6-46P-201ENST00000383860 107 ntBASIC-0.32□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.32□□□□□ -2.46
ZIC4Q8N9L1 SNORD115-46-201ENST00000390982 71 ntBASIC-0.32□□□□□ -2.46
ZIC4Q8N9L1 RNU6-876P-201ENST00000391295 104 ntBASIC-0.32□□□□□ -2.46
ZIC4Q8N9L1 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.32□□□□□ -2.46
ZIC4Q8N9L1 RNU7-161P-201ENST00000517289 62 ntBASIC-0.32□□□□□ -2.46
ZIC4Q8N9L1 MIR5706-201ENST00000579841 80 ntBASIC-0.32□□□□□ -2.46
ZIC4Q8N9L1 MIR5197-201ENST00000583721 112 ntBASIC-0.32□□□□□ -2.46
ZIC4Q8N9L1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.32□□□□□ -2.46
ZIC4Q8N9L1 uc_338.28-201ENST00000612082 187 ntBASIC-0.32□□□□□ -2.46
ZIC4Q8N9L1 AC093783.1-201ENST00000612976 329 ntBASIC-0.32□□□□□ -2.46
ZIC4Q8N9L1 MIR302B-201ENST00000362188 73 ntBASIC-0.33□□□□□ -2.46
ZIC4Q8N9L1 SNORA22.1-201ENST00000362701 134 ntBASIC-0.33□□□□□ -2.46
ZIC4Q8N9L1 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.33□□□□□ -2.46
ZIC4Q8N9L1 RNU6-702P-201ENST00000364982 107 ntBASIC-0.33□□□□□ -2.46
ZIC4Q8N9L1 SNORA18-201ENST00000384416 132 ntBASIC-0.33□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.33□□□□□ -2.46
ZIC4Q8N9L1 MIR1265-201ENST00000408444 86 ntBASIC-0.33□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.33□□□□□ -2.46
ZIC4Q8N9L1 RNU2-55P-201ENST00000411146 174 ntBASIC-0.33□□□□□ -2.46
ZIC4Q8N9L1 AC244505.6-201ENST00000452829 130 ntBASIC-0.33□□□□□ -2.46
ZIC4Q8N9L1 RNA5SP153-201ENST00000516498 76 ntBASIC-0.33□□□□□ -2.46
ZIC4Q8N9L1 RNU6-531P-201ENST00000516694 104 ntBASIC-0.33□□□□□ -2.46
ZIC4Q8N9L1 MIR4636-201ENST00000582271 80 ntBASIC-0.33□□□□□ -2.46
ZIC4Q8N9L1 AL360085.1-201ENST00000604713 532 ntBASIC-0.33□□□□□ -2.46
ZIC4Q8N9L1 AL670379.3-201ENST00000605040 251 ntBASIC-0.33□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.33□□□□□ -2.46
ZIC4Q8N9L1 MIR376A1-201ENST00000616574 68 ntBASIC-0.33□□□□□ -2.46
ZIC4Q8N9L1 RNU4-90P-201ENST00000362773 141 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 SNORD115-24-201ENST00000363528 82 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 RNU6-662P-201ENST00000384253 104 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 RNU6-121P-201ENST00000410525 99 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms