Protein–RNA interactions for Protein: Q8IYE1

CCDC13, Coiled-coil domain-containing protein 13, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13Q8IYE1 RNU6-654P-201ENST00000364373 107 ntBASIC1.03□□□□□ -2.24
CCDC13Q8IYE1 RNU4-38P-201ENST00000364472 129 ntBASIC1.03□□□□□ -2.24
CCDC13Q8IYE1 RNU6-1187P-201ENST00000364771 110 ntBASIC1.03□□□□□ -2.24
CCDC13Q8IYE1 SCARNA15-202ENST00000516881 127 ntBASIC1.03□□□□□ -2.24
CCDC13Q8IYE1 AC022559.1-201ENST00000520905 205 ntBASIC1.03□□□□□ -2.24
CCDC13Q8IYE1 AP002392.1-201ENST00000537692 208 ntBASIC1.03□□□□□ -2.24
CCDC13Q8IYE1 AC131055.1-201ENST00000584626 316 ntBASIC1.03□□□□□ -2.24
CCDC13Q8IYE1 MIR6779-201ENST00000617283 64 ntBASIC1.03□□□□□ -2.24
CCDC13Q8IYE1 SNORA25.7-201ENST00000364375 127 ntBASIC1.02□□□□□ -2.25
CCDC13Q8IYE1 Y_RNA.393-201ENST00000383936 102 ntBASIC1.02□□□□□ -2.25
CCDC13Q8IYE1 SNORD111-201ENST00000408139 94 ntBASIC1.02□□□□□ -2.25
CCDC13Q8IYE1 MIR548I3-201ENST00000408378 149 ntBASIC1.02□□□□□ -2.25
CCDC13Q8IYE1 AC006461.1-201ENST00000412637 326 ntBASIC1.02□□□□□ -2.25
CCDC13Q8IYE1 RNU2-11P-201ENST00000459191 187 ntBASIC1.02□□□□□ -2.25
CCDC13Q8IYE1 RNU7-80P-201ENST00000459562 61 ntBASIC1.02□□□□□ -2.25
CCDC13Q8IYE1 SNORD124-201ENST00000459577 104 ntBASIC1.02□□□□□ -2.25
CCDC13Q8IYE1 AC107027.2-201ENST00000512197 115 ntBASIC1.02□□□□□ -2.25
CCDC13Q8IYE1 MIR4264-201ENST00000583520 66 ntBASIC1.02□□□□□ -2.25
CCDC13Q8IYE1 RNU6-682P-201ENST00000363843 106 ntBASIC1.01□□□□□ -2.25
CCDC13Q8IYE1 SNORD113.3-201ENST00000364630 78 ntBASIC1.01□□□□□ -2.25
CCDC13Q8IYE1 SNORD114-24-201ENST00000365029 72 ntBASIC1.01□□□□□ -2.25
CCDC13Q8IYE1 Y_RNA.330-201ENST00000365230 109 ntBASIC1.01□□□□□ -2.25
CCDC13Q8IYE1 Y_RNA.454-201ENST00000384224 113 ntBASIC1.01□□□□□ -2.25
CCDC13Q8IYE1 RNU6-125P-201ENST00000384505 107 ntBASIC1.01□□□□□ -2.25
CCDC13Q8IYE1 AC090844.1-201ENST00000422019 156 ntBASIC1.01□□□□□ -2.25
CCDC13Q8IYE1 RNU7-121P-201ENST00000516604 62 ntBASIC1.01□□□□□ -2.25
CCDC13Q8IYE1 SNORA81.3-201ENST00000517283 198 ntBASIC1.01□□□□□ -2.25
CCDC13Q8IYE1 RNU4-84P-201ENST00000364200 139 ntBASIC1□□□□□ -2.25
CCDC13Q8IYE1 Y_RNA.351-201ENST00000365436 96 ntBASIC1□□□□□ -2.25
CCDC13Q8IYE1 Y_RNA.441-201ENST00000384123 112 ntBASIC1□□□□□ -2.25
CCDC13Q8IYE1 SNORA26.6-201ENST00000391256 115 ntBASIC1□□□□□ -2.25
CCDC13Q8IYE1 SEPT7P4-201ENST00000437076 306 ntBASIC1□□□□□ -2.25
CCDC13Q8IYE1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CCDC13Q8IYE1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.99□□□□□ -2.25
CCDC13Q8IYE1 Y_RNA.337-201ENST00000365312 102 ntBASIC0.99□□□□□ -2.25
CCDC13Q8IYE1 RNU6-239P-201ENST00000390990 99 ntBASIC0.99□□□□□ -2.25
CCDC13Q8IYE1 RNU5E-9P-201ENST00000411164 104 ntBASIC0.99□□□□□ -2.25
CCDC13Q8IYE1 AC244023.1-201ENST00000426884 112 ntBASIC0.99□□□□□ -2.25
CCDC13Q8IYE1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.99□□□□□ -2.25
CCDC13Q8IYE1 MIR3646-201ENST00000578301 84 ntBASIC0.99□□□□□ -2.25
CCDC13Q8IYE1 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
CCDC13Q8IYE1 AC242498.1-201ENST00000604134 111 ntBASIC0.99□□□□□ -2.25
CCDC13Q8IYE1 AC211469.2-201ENST00000605461 205 ntBASIC0.99□□□□□ -2.25
CCDC13Q8IYE1 AC091932.4-201ENST00000623386 200 ntBASIC0.99□□□□□ -2.25
CCDC13Q8IYE1 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.99□□□□□ -2.25
CCDC13Q8IYE1 Y_RNA.430-201ENST00000384081 110 ntBASIC0.98□□□□□ -2.25
CCDC13Q8IYE1 RNU6-768P-201ENST00000384683 107 ntBASIC0.98□□□□□ -2.25
CCDC13Q8IYE1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.98□□□□□ -2.25
CCDC13Q8IYE1 FABP5P4-201ENST00000437203 171 ntBASIC0.98□□□□□ -2.25
CCDC13Q8IYE1 RNU6-794P-201ENST00000517261 64 ntBASIC0.98□□□□□ -2.25
CCDC13Q8IYE1 AC023827.1-201ENST00000569247 97 ntBASIC0.98□□□□□ -2.25
CCDC13Q8IYE1 AP000753.3-201ENST00000604083 169 ntBASIC0.98□□□□□ -2.25
CCDC13Q8IYE1 AC004792.1-201ENST00000614523 137 ntBASIC0.98□□□□□ -2.25
CCDC13Q8IYE1 SNORA1.1-201ENST00000364671 133 ntBASIC0.97□□□□□ -2.25
CCDC13Q8IYE1 SNORD38B-201ENST00000384690 67 ntBASIC0.97□□□□□ -2.25
CCDC13Q8IYE1 RNA5SP261-201ENST00000410536 106 ntBASIC0.97□□□□□ -2.25
CCDC13Q8IYE1 RNU6-1135P-201ENST00000411083 103 ntBASIC0.97□□□□□ -2.25
CCDC13Q8IYE1 RNU6-602P-201ENST00000411155 105 ntBASIC0.97□□□□□ -2.25
CCDC13Q8IYE1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.97□□□□□ -2.25
CCDC13Q8IYE1 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
CCDC13Q8IYE1 RNU6-861P-201ENST00000516745 106 ntBASIC0.97□□□□□ -2.25
CCDC13Q8IYE1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.97□□□□□ -2.25
CCDC13Q8IYE1 SNORD38B-202ENST00000625943 69 ntBASIC0.97□□□□□ -2.25
CCDC13Q8IYE1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.25
CCDC13Q8IYE1 RNA5SP325-201ENST00000363756 130 ntBASIC0.96□□□□□ -2.26
CCDC13Q8IYE1 RNU6-1318P-201ENST00000365389 103 ntBASIC0.96□□□□□ -2.26
CCDC13Q8IYE1 Y_RNA.521-201ENST00000384560 114 ntBASIC0.96□□□□□ -2.26
CCDC13Q8IYE1 RNU6-1319P-201ENST00000390855 104 ntBASIC0.96□□□□□ -2.26
CCDC13Q8IYE1 RNU6-747P-201ENST00000390928 104 ntBASIC0.96□□□□□ -2.26
CCDC13Q8IYE1 RNU6-241P-201ENST00000391148 104 ntBASIC0.96□□□□□ -2.26
CCDC13Q8IYE1 SNORA75.5-201ENST00000391291 81 ntBASIC0.96□□□□□ -2.26
CCDC13Q8IYE1 RNA5SP95-201ENST00000410319 137 ntBASIC0.96□□□□□ -2.26
CCDC13Q8IYE1 RNU6-177P-201ENST00000411257 104 ntBASIC0.96□□□□□ -2.26
CCDC13Q8IYE1 HMGN1P33-201ENST00000432945 451 ntBASIC0.96□□□□□ -2.26
CCDC13Q8IYE1 RNU6-1149P-201ENST00000516810 97 ntBASIC0.96□□□□□ -2.26
CCDC13Q8IYE1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.96□□□□□ -2.26
CCDC13Q8IYE1 MIR5000-201ENST00000577717 103 ntBASIC0.96□□□□□ -2.26
CCDC13Q8IYE1 MIR6717-201ENST00000622747 73 ntBASIC0.96□□□□□ -2.26
CCDC13Q8IYE1 Y_RNA.357-201ENST00000365487 109 ntBASIC0.95□□□□□ -2.26
CCDC13Q8IYE1 SNORA2B-201ENST00000384583 137 ntBASIC0.95□□□□□ -2.26
CCDC13Q8IYE1 RNU6-1190P-201ENST00000410811 104 ntBASIC0.95□□□□□ -2.26
CCDC13Q8IYE1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.95□□□□□ -2.26
CCDC13Q8IYE1 Y_RNA.662-201ENST00000516028 97 ntBASIC0.95□□□□□ -2.26
CCDC13Q8IYE1 RNA5SP255-201ENST00000516370 107 ntBASIC0.95□□□□□ -2.26
CCDC13Q8IYE1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.95□□□□□ -2.26
CCDC13Q8IYE1 MIR6857-201ENST00000613267 93 ntBASIC0.95□□□□□ -2.26
CCDC13Q8IYE1 MIR6841-201ENST00000637129 72 ntBASIC0.95□□□□□ -2.26
CCDC13Q8IYE1 MIR302B-201ENST00000362188 73 ntBASIC0.94□□□□□ -2.26
CCDC13Q8IYE1 RNU6-1082P-201ENST00000364574 107 ntBASIC0.94□□□□□ -2.26
CCDC13Q8IYE1 RNU1-133P-201ENST00000364867 167 ntBASIC0.94□□□□□ -2.26
CCDC13Q8IYE1 MIR942-201ENST00000401111 86 ntBASIC0.94□□□□□ -2.26
CCDC13Q8IYE1 RNU2-64P-201ENST00000411315 191 ntBASIC0.94□□□□□ -2.26
CCDC13Q8IYE1 RPS3AP1-201ENST00000413190 320 ntBASIC0.94□□□□□ -2.26
CCDC13Q8IYE1 POLR2J4-204ENST00000418424 324 ntBASIC0.94□□□□□ -2.26
CCDC13Q8IYE1 PDCD5P2-201ENST00000507570 312 ntBASIC0.94□□□□□ -2.26
CCDC13Q8IYE1 RNA5SP236-201ENST00000516169 116 ntBASIC0.94□□□□□ -2.26
CCDC13Q8IYE1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.94□□□□□ -2.26
CCDC13Q8IYE1 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.94□□□□□ -2.26
CCDC13Q8IYE1 MIR373-201ENST00000362273 69 ntBASIC0.93□□□□□ -2.26
CCDC13Q8IYE1 Y_RNA.52-201ENST00000362760 96 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 226.4 ms