Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
TRIM42Q8IWZ5 SNORD115-27-201ENST00000364430 82 ntBASIC2.55□□□□□ -2
TRIM42Q8IWZ5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.55□□□□□ -2
TRIM42Q8IWZ5 UBE2DNL-203ENST00000474922 222 ntBASIC2.55□□□□□ -2
TRIM42Q8IWZ5 RNA5SP282-201ENST00000516355 108 ntBASIC2.55□□□□□ -2
TRIM42Q8IWZ5 MIR548AR-201ENST00000582191 57 ntBASIC2.55□□□□□ -2
TRIM42Q8IWZ5 AC245884.12-201ENST00000615364 59 ntBASIC2.55□□□□□ -2
TRIM42Q8IWZ5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.55□□□□□ -2
TRIM42Q8IWZ5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM42Q8IWZ5 MIR34C-201ENST00000384831 77 ntBASIC2.54□□□□□ -2
TRIM42Q8IWZ5 SNORD28B-201ENST00000390993 75 ntBASIC2.54□□□□□ -2
TRIM42Q8IWZ5 AL161932.1-201ENST00000437408 146 ntBASIC2.54□□□□□ -2
TRIM42Q8IWZ5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.54□□□□□ -2
TRIM42Q8IWZ5 RN7SKP132-201ENST00000516001 208 ntBASIC2.54□□□□□ -2
TRIM42Q8IWZ5 RNU7-35P-201ENST00000517174 62 ntBASIC2.54□□□□□ -2
TRIM42Q8IWZ5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.54□□□□□ -2
TRIM42Q8IWZ5 AC021506.2-201ENST00000612354 169 ntBASIC2.54□□□□□ -2
TRIM42Q8IWZ5 RNU6-524P-201ENST00000384270 107 ntBASIC2.53□□□□□ -2
TRIM42Q8IWZ5 RNU6-342P-201ENST00000384521 104 ntBASIC2.53□□□□□ -2
TRIM42Q8IWZ5 MIR889-201ENST00000401280 79 ntBASIC2.53□□□□□ -2
TRIM42Q8IWZ5 RPS29P28-201ENST00000446439 141 ntBASIC2.53□□□□□ -2
TRIM42Q8IWZ5 MIR4513-201ENST00000581077 86 ntBASIC2.53□□□□□ -2
TRIM42Q8IWZ5 MIR4712-201ENST00000583750 82 ntBASIC2.53□□□□□ -2
TRIM42Q8IWZ5 AL513423.1-201ENST00000621695 132 ntBASIC2.53□□□□□ -2
TRIM42Q8IWZ5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM42Q8IWZ5 Y_RNA.510-201ENST00000384511 114 ntBASIC2.52□□□□□ -2.01
TRIM42Q8IWZ5 Y_RNA.567-201ENST00000384736 106 ntBASIC2.52□□□□□ -2.01
TRIM42Q8IWZ5 RNU6-613P-201ENST00000410412 108 ntBASIC2.52□□□□□ -2.01
TRIM42Q8IWZ5 HMGN1P33-201ENST00000432945 451 ntBASIC2.52□□□□□ -2.01
TRIM42Q8IWZ5 AC093850.1-201ENST00000454121 251 ntBASIC2.52□□□□□ -2.01
TRIM42Q8IWZ5 AC079804.2-201ENST00000490376 200 ntBASIC2.52□□□□□ -2.01
TRIM42Q8IWZ5 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.52□□□□□ -2.01
TRIM42Q8IWZ5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM42Q8IWZ5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM42Q8IWZ5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM42Q8IWZ5 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM42Q8IWZ5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM42Q8IWZ5 MIR9-1-201ENST00000385198 89 ntBASIC2.51□□□□□ -2.01
TRIM42Q8IWZ5 MIR548G-201ENST00000408442 89 ntBASIC2.51□□□□□ -2.01
TRIM42Q8IWZ5 RNA5SP100-201ENST00000410903 110 ntBASIC2.51□□□□□ -2.01
TRIM42Q8IWZ5 RNA5SP59-201ENST00000410922 110 ntBASIC2.51□□□□□ -2.01
TRIM42Q8IWZ5 SNORD123-201ENST00000459473 70 ntBASIC2.51□□□□□ -2.01
TRIM42Q8IWZ5 RNA5SP356-201ENST00000515972 94 ntBASIC2.51□□□□□ -2.01
TRIM42Q8IWZ5 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.51□□□□□ -2.01
TRIM42Q8IWZ5 AC079600.2-201ENST00000550076 130 ntBASIC2.51□□□□□ -2.01
TRIM42Q8IWZ5 MIR8055-201ENST00000610739 97 ntBASIC2.51□□□□□ -2.01
TRIM42Q8IWZ5 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.51□□□□□ -2.01
TRIM42Q8IWZ5 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.51□□□□□ -2.01
TRIM42Q8IWZ5 AC005336.3-201ENST00000623833 2679 ntBASIC2.51□□□□□ -2.01
TRIM42Q8IWZ5 RNU6-457P-201ENST00000363999 107 ntBASIC2.5□□□□□ -2.01
TRIM42Q8IWZ5 RNU1-112P-201ENST00000364401 164 ntBASIC2.5□□□□□ -2.01
TRIM42Q8IWZ5 Y_RNA.537-201ENST00000384626 109 ntBASIC2.5□□□□□ -2.01
TRIM42Q8IWZ5 MIR660-201ENST00000385235 97 ntBASIC2.5□□□□□ -2.01
TRIM42Q8IWZ5 SNORD23.1-201ENST00000408212 104 ntBASIC2.5□□□□□ -2.01
TRIM42Q8IWZ5 AC245047.7-201ENST00000440265 293 ntBASIC2.5□□□□□ -2.01
TRIM42Q8IWZ5 RPL23AP94-201ENST00000512518 302 ntBASIC2.5□□□□□ -2.01
TRIM42Q8IWZ5 AC093729.1-201ENST00000513074 128 ntBASIC2.5□□□□□ -2.01
TRIM42Q8IWZ5 SNORA31.17-201ENST00000516953 127 ntBASIC2.5□□□□□ -2.01
TRIM42Q8IWZ5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.5□□□□□ -2.01
TRIM42Q8IWZ5 RNU6-90P-201ENST00000606352 106 ntBASIC2.5□□□□□ -2.01
TRIM42Q8IWZ5 AC080100.1-201ENST00000624239 5356 ntBASIC2.5□□□□□ -2.01
TRIM42Q8IWZ5 RNA5SP456-201ENST00000364002 114 ntBASIC2.49□□□□□ -2.01
TRIM42Q8IWZ5 RNU6-1229P-201ENST00000364295 107 ntBASIC2.49□□□□□ -2.01
TRIM42Q8IWZ5 MIR519C-201ENST00000385053 87 ntBASIC2.49□□□□□ -2.01
TRIM42Q8IWZ5 RPL31P63-201ENST00000422565 375 ntBASIC2.49□□□□□ -2.01
TRIM42Q8IWZ5 RNU1-98P-201ENST00000458992 160 ntBASIC2.49□□□□□ -2.01
TRIM42Q8IWZ5 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.49□□□□□ -2.01
TRIM42Q8IWZ5 RNU2-19P-201ENST00000517288 84 ntBASIC2.49□□□□□ -2.01
TRIM42Q8IWZ5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM42Q8IWZ5 AL596028.1-201ENST00000326971 197 ntBASIC2.48□□□□□ -2.01
TRIM42Q8IWZ5 Y_RNA.173-201ENST00000363776 113 ntBASIC2.48□□□□□ -2.01
TRIM42Q8IWZ5 Y_RNA.448-201ENST00000384185 108 ntBASIC2.48□□□□□ -2.01
TRIM42Q8IWZ5 MIR526A1-201ENST00000384897 85 ntBASIC2.48□□□□□ -2.01
TRIM42Q8IWZ5 AL513328.1-201ENST00000446460 224 ntBASIC2.48□□□□□ -2.01
TRIM42Q8IWZ5 SNORD109B-201ENST00000458961 67 ntBASIC2.48□□□□□ -2.01
TRIM42Q8IWZ5 SNORD109A-201ENST00000459128 67 ntBASIC2.48□□□□□ -2.01
TRIM42Q8IWZ5 snoU13.16-201ENST00000459350 104 ntBASIC2.48□□□□□ -2.01
TRIM42Q8IWZ5 AC099513.1-201ENST00000490423 301 ntBASIC2.48□□□□□ -2.01
TRIM42Q8IWZ5 SNORD67.1-201ENST00000516618 108 ntBASIC2.48□□□□□ -2.01
TRIM42Q8IWZ5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM42Q8IWZ5 MIR4319-201ENST00000577285 85 ntBASIC2.48□□□□□ -2.01
TRIM42Q8IWZ5 MIR8065-201ENST00000620577 100 ntBASIC2.48□□□□□ -2.01
TRIM42Q8IWZ5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TRIM42Q8IWZ5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.48□□□□□ -2.01
TRIM42Q8IWZ5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TRIM42Q8IWZ5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
TRIM42Q8IWZ5 RNU6-865P-201ENST00000364772 107 ntBASIC2.47□□□□□ -2.01
TRIM42Q8IWZ5 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
TRIM42Q8IWZ5 RNU6-1321P-201ENST00000390905 107 ntBASIC2.47□□□□□ -2.01
TRIM42Q8IWZ5 RNA5SP184-201ENST00000411071 108 ntBASIC2.47□□□□□ -2.01
TRIM42Q8IWZ5 AC140658.3-201ENST00000567603 271 ntBASIC2.47□□□□□ -2.01
TRIM42Q8IWZ5 AL513043.2-201ENST00000573941 143 ntBASIC2.47□□□□□ -2.01
TRIM42Q8IWZ5 AC020891.4-201ENST00000605745 93 ntBASIC2.47□□□□□ -2.01
TRIM42Q8IWZ5 U4.3-201ENST00000621047 82 ntBASIC2.47□□□□□ -2.01
TRIM42Q8IWZ5 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TRIM42Q8IWZ5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.47□□□□□ -2.01
TRIM42Q8IWZ5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
TRIM42Q8IWZ5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
TRIM42Q8IWZ5 MIR424-201ENST00000362227 98 ntBASIC2.46□□□□□ -2.02
TRIM42Q8IWZ5 RNU6-360P-201ENST00000390944 104 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 270.2 ms