Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC242498.1-201ENST00000604134 111 ntBASIC0.74□□□□□ -2.29
CCDC60Q8IWA6 AL136317.1-201ENST00000612653 226 ntBASIC0.74□□□□□ -2.29
CCDC60Q8IWA6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.74□□□□□ -2.29
CCDC60Q8IWA6 PVT1_3.1-201ENST00000620853 95 ntBASIC0.74□□□□□ -2.29
CCDC60Q8IWA6 MIR376A2-201ENST00000636782 80 ntBASIC0.74□□□□□ -2.29
CCDC60Q8IWA6 Y_RNA.193-201ENST00000363979 102 ntBASIC0.73□□□□□ -2.29
CCDC60Q8IWA6 Y_RNA.351-201ENST00000365436 96 ntBASIC0.73□□□□□ -2.29
CCDC60Q8IWA6 Y_RNA.452-201ENST00000384202 108 ntBASIC0.73□□□□□ -2.29
CCDC60Q8IWA6 RNU4-70P-201ENST00000384579 139 ntBASIC0.73□□□□□ -2.29
CCDC60Q8IWA6 Y_RNA.542-201ENST00000384641 111 ntBASIC0.73□□□□□ -2.29
CCDC60Q8IWA6 MIR1827-201ENST00000408549 66 ntBASIC0.73□□□□□ -2.29
CCDC60Q8IWA6 SNORD99-201ENST00000408612 74 ntBASIC0.73□□□□□ -2.29
CCDC60Q8IWA6 RNU4-43P-201ENST00000410628 137 ntBASIC0.73□□□□□ -2.29
CCDC60Q8IWA6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.73□□□□□ -2.29
CCDC60Q8IWA6 SEPT7P4-201ENST00000437076 306 ntBASIC0.73□□□□□ -2.29
CCDC60Q8IWA6 RNU6-1023P-201ENST00000516137 106 ntBASIC0.73□□□□□ -2.29
CCDC60Q8IWA6 RNU4-71P-201ENST00000516258 113 ntBASIC0.73□□□□□ -2.29
CCDC60Q8IWA6 MIR4308-201ENST00000580634 81 ntBASIC0.73□□□□□ -2.29
CCDC60Q8IWA6 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
CCDC60Q8IWA6 AL590095.2-201ENST00000604136 117 ntBASIC0.73□□□□□ -2.29
CCDC60Q8IWA6 AL353765.1-201ENST00000605514 183 ntBASIC0.73□□□□□ -2.29
CCDC60Q8IWA6 MIR8055-201ENST00000610739 97 ntBASIC0.73□□□□□ -2.29
CCDC60Q8IWA6 Z97988.1-201ENST00000637697 135 ntBASIC0.73□□□□□ -2.29
CCDC60Q8IWA6 Y_RNA.571-201ENST00000384753 98 ntBASIC0.72□□□□□ -2.29
CCDC60Q8IWA6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
CCDC60Q8IWA6 RNU7-45P-201ENST00000459460 63 ntBASIC0.72□□□□□ -2.29
CCDC60Q8IWA6 SNORD116-25-201ENST00000516517 92 ntBASIC0.72□□□□□ -2.29
CCDC60Q8IWA6 MIR4771-2-201ENST00000577758 74 ntBASIC0.72□□□□□ -2.29
CCDC60Q8IWA6 AC025627.3-201ENST00000582078 182 ntBASIC0.72□□□□□ -2.29
CCDC60Q8IWA6 MIR4771-1-201ENST00000582617 74 ntBASIC0.72□□□□□ -2.29
CCDC60Q8IWA6 MIR5197-201ENST00000583721 112 ntBASIC0.72□□□□□ -2.29
CCDC60Q8IWA6 Y_RNA.121-201ENST00000363309 113 ntBASIC0.71□□□□□ -2.3
CCDC60Q8IWA6 Y_RNA.144-201ENST00000363521 113 ntBASIC0.71□□□□□ -2.3
CCDC60Q8IWA6 RNU6-934P-201ENST00000365154 107 ntBASIC0.71□□□□□ -2.3
CCDC60Q8IWA6 RNU6-580P-201ENST00000365159 107 ntBASIC0.71□□□□□ -2.3
CCDC60Q8IWA6 SNORD58.1-201ENST00000391313 66 ntBASIC0.71□□□□□ -2.3
CCDC60Q8IWA6 Y_RNA.618-201ENST00000410949 107 ntBASIC0.71□□□□□ -2.3
CCDC60Q8IWA6 RNU6-602P-201ENST00000411155 105 ntBASIC0.71□□□□□ -2.3
CCDC60Q8IWA6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
CCDC60Q8IWA6 MIR378D2-201ENST00000580636 98 ntBASIC0.71□□□□□ -2.3
CCDC60Q8IWA6 AL162730.1-201ENST00000605734 292 ntBASIC0.71□□□□□ -2.3
CCDC60Q8IWA6 AL596211.1-201ENST00000569873 2277 ntBASIC0.71□□□□□ -2.3
CCDC60Q8IWA6 AC010332.2-201ENST00000613083 1904 ntBASIC0.7□□□□□ -2.3
CCDC60Q8IWA6 RNU6-463P-201ENST00000384340 107 ntBASIC0.7□□□□□ -2.3
CCDC60Q8IWA6 MIR588-201ENST00000384900 83 ntBASIC0.7□□□□□ -2.3
CCDC60Q8IWA6 SNORD105-201ENST00000386910 85 ntBASIC0.7□□□□□ -2.3
CCDC60Q8IWA6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.7□□□□□ -2.3
CCDC60Q8IWA6 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
CCDC60Q8IWA6 AC113410.1-201ENST00000505029 247 ntBASIC0.7□□□□□ -2.3
CCDC60Q8IWA6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.7□□□□□ -2.3
CCDC60Q8IWA6 AL365205.2-201ENST00000594586 68 ntBASIC0.7□□□□□ -2.3
CCDC60Q8IWA6 uc_338.6-201ENST00000613544 171 ntBASIC0.7□□□□□ -2.3
CCDC60Q8IWA6 MIR6740-201ENST00000618268 113 ntBASIC0.7□□□□□ -2.3
CCDC60Q8IWA6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CCDC60Q8IWA6 HSBP1P2-201ENST00000299671 229 ntBASIC0.69□□□□□ -2.3
CCDC60Q8IWA6 RNU6-643P-201ENST00000384018 107 ntBASIC0.69□□□□□ -2.3
CCDC60Q8IWA6 MIR598-201ENST00000384868 97 ntBASIC0.69□□□□□ -2.3
CCDC60Q8IWA6 RPS26P5-201ENST00000418544 335 ntBASIC0.69□□□□□ -2.3
CCDC60Q8IWA6 RNU7-80P-201ENST00000459562 61 ntBASIC0.69□□□□□ -2.3
CCDC60Q8IWA6 RNU6-977P-201ENST00000516411 103 ntBASIC0.69□□□□□ -2.3
CCDC60Q8IWA6 RNU7-70P-201ENST00000516941 66 ntBASIC0.69□□□□□ -2.3
CCDC60Q8IWA6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.69□□□□□ -2.3
CCDC60Q8IWA6 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.69□□□□□ -2.3
CCDC60Q8IWA6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.69□□□□□ -2.3
CCDC60Q8IWA6 AC011195.1-201ENST00000578177 177 ntBASIC0.69□□□□□ -2.3
CCDC60Q8IWA6 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.69□□□□□ -2.3
CCDC60Q8IWA6 AC104465.1-201ENST00000611365 139 ntBASIC0.69□□□□□ -2.3
CCDC60Q8IWA6 AC091932.4-201ENST00000623386 200 ntBASIC0.69□□□□□ -2.3
CCDC60Q8IWA6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.68□□□□□ -2.3
CCDC60Q8IWA6 RNU6-369P-201ENST00000362515 102 ntBASIC0.68□□□□□ -2.3
CCDC60Q8IWA6 RNU6-978P-201ENST00000364371 103 ntBASIC0.68□□□□□ -2.3
CCDC60Q8IWA6 RNU6-1292P-201ENST00000383856 107 ntBASIC0.68□□□□□ -2.3
CCDC60Q8IWA6 Y_RNA.540-201ENST00000384638 111 ntBASIC0.68□□□□□ -2.3
CCDC60Q8IWA6 MIR520F-201ENST00000384824 87 ntBASIC0.68□□□□□ -2.3
CCDC60Q8IWA6 SNORD12C-201ENST00000386307 89 ntBASIC0.68□□□□□ -2.3
CCDC60Q8IWA6 MIR6513-201ENST00000621188 64 ntBASIC0.68□□□□□ -2.3
CCDC60Q8IWA6 RNA5SP499-201ENST00000363982 119 ntBASIC0.67□□□□□ -2.3
CCDC60Q8IWA6 Y_RNA.200-201ENST00000364018 102 ntBASIC0.67□□□□□ -2.3
CCDC60Q8IWA6 RNU6-275P-201ENST00000364910 107 ntBASIC0.67□□□□□ -2.3
CCDC60Q8IWA6 Y_RNA.412-201ENST00000384001 104 ntBASIC0.67□□□□□ -2.3
CCDC60Q8IWA6 Y_RNA.454-201ENST00000384224 113 ntBASIC0.67□□□□□ -2.3
CCDC60Q8IWA6 RNU6-1165P-201ENST00000410119 107 ntBASIC0.67□□□□□ -2.3
CCDC60Q8IWA6 MIR6717-201ENST00000622747 73 ntBASIC0.67□□□□□ -2.3
CCDC60Q8IWA6 U6.106-201ENST00000636360 105 ntBASIC0.67□□□□□ -2.3
CCDC60Q8IWA6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
CCDC60Q8IWA6 MIR411-201ENST00000362239 96 ntBASIC0.66□□□□□ -2.3
CCDC60Q8IWA6 Y_RNA.83-201ENST00000363005 113 ntBASIC0.66□□□□□ -2.3
CCDC60Q8IWA6 RNA5SP127-201ENST00000411051 133 ntBASIC0.66□□□□□ -2.3
CCDC60Q8IWA6 snoU13.2-201ENST00000459201 104 ntBASIC0.66□□□□□ -2.3
CCDC60Q8IWA6 AC004817.2-201ENST00000561794 651 ntBASIC0.66□□□□□ -2.3
CCDC60Q8IWA6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CCDC60Q8IWA6 Y_RNA.521-201ENST00000384560 114 ntBASIC0.65□□□□□ -2.31
CCDC60Q8IWA6 MIR520H-201ENST00000385126 88 ntBASIC0.65□□□□□ -2.31
CCDC60Q8IWA6 RNU1-119P-201ENST00000391122 165 ntBASIC0.65□□□□□ -2.31
CCDC60Q8IWA6 RNU6-918P-201ENST00000391219 106 ntBASIC0.65□□□□□ -2.31
CCDC60Q8IWA6 SNORA26.6-201ENST00000391256 115 ntBASIC0.65□□□□□ -2.31
CCDC60Q8IWA6 RNA5SP261-201ENST00000410536 106 ntBASIC0.65□□□□□ -2.31
CCDC60Q8IWA6 RNA5SP222-201ENST00000411039 105 ntBASIC0.65□□□□□ -2.31
CCDC60Q8IWA6 AC244098.3-201ENST00000424803 96 ntBASIC0.65□□□□□ -2.31
CCDC60Q8IWA6 MIR4676-201ENST00000583078 72 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 219.4 ms