Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SNORD123-201ENST00000459473 70 ntBASIC2.46□□□□□ -2.02
NPAS4Q8IUM7 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.46□□□□□ -2.02
NPAS4Q8IUM7 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.46□□□□□ -2.02
NPAS4Q8IUM7 FAM71BP1-201ENST00000604431 523 ntBASIC2.46□□□□□ -2.02
NPAS4Q8IUM7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NPAS4Q8IUM7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.45□□□□□ -2.02
NPAS4Q8IUM7 RNU6-409P-201ENST00000384114 104 ntBASIC2.45□□□□□ -2.02
NPAS4Q8IUM7 RNU6-1152P-201ENST00000384576 107 ntBASIC2.45□□□□□ -2.02
NPAS4Q8IUM7 MIR144-201ENST00000384886 86 ntBASIC2.45□□□□□ -2.02
NPAS4Q8IUM7 MIR676-201ENST00000390702 67 ntBASIC2.45□□□□□ -2.02
NPAS4Q8IUM7 SNORA7.5-201ENST00000410672 110 ntBASIC2.45□□□□□ -2.02
NPAS4Q8IUM7 RNU7-113P-201ENST00000459273 62 ntBASIC2.45□□□□□ -2.02
NPAS4Q8IUM7 MIR3198-2-201ENST00000577868 80 ntBASIC2.45□□□□□ -2.02
NPAS4Q8IUM7 MIR4694-201ENST00000578534 80 ntBASIC2.45□□□□□ -2.02
NPAS4Q8IUM7 Y_RNA.17-201ENST00000362433 111 ntBASIC2.44□□□□□ -2.02
NPAS4Q8IUM7 SNORD33-201ENST00000362761 85 ntBASIC2.44□□□□□ -2.02
NPAS4Q8IUM7 RNU6-170P-201ENST00000362832 104 ntBASIC2.44□□□□□ -2.02
NPAS4Q8IUM7 Y_RNA.470-201ENST00000384307 117 ntBASIC2.44□□□□□ -2.02
NPAS4Q8IUM7 SNORA64-201ENST00000384674 134 ntBASIC2.44□□□□□ -2.02
NPAS4Q8IUM7 MIR221-201ENST00000385135 110 ntBASIC2.44□□□□□ -2.02
NPAS4Q8IUM7 RNU4-69P-201ENST00000410677 143 ntBASIC2.44□□□□□ -2.02
NPAS4Q8IUM7 AL353813.1-201ENST00000440700 253 ntBASIC2.44□□□□□ -2.02
NPAS4Q8IUM7 RNU7-43P-201ENST00000516554 64 ntBASIC2.44□□□□□ -2.02
NPAS4Q8IUM7 RNU6-958P-201ENST00000516995 106 ntBASIC2.44□□□□□ -2.02
NPAS4Q8IUM7 SNORA74.3-201ENST00000517108 154 ntBASIC2.44□□□□□ -2.02
NPAS4Q8IUM7 U7.3-201ENST00000616123 62 ntBASIC2.44□□□□□ -2.02
NPAS4Q8IUM7 MIR6766-201ENST00000622641 72 ntBASIC2.44□□□□□ -2.02
NPAS4Q8IUM7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
NPAS4Q8IUM7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
NPAS4Q8IUM7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
NPAS4Q8IUM7 Y_RNA.10-201ENST00000362371 110 ntBASIC2.43□□□□□ -2.02
NPAS4Q8IUM7 RNU6-1319P-201ENST00000390855 104 ntBASIC2.43□□□□□ -2.02
NPAS4Q8IUM7 RNU6-747P-201ENST00000390928 104 ntBASIC2.43□□□□□ -2.02
NPAS4Q8IUM7 RNU6-679P-201ENST00000391003 106 ntBASIC2.43□□□□□ -2.02
NPAS4Q8IUM7 RNU6-241P-201ENST00000391148 104 ntBASIC2.43□□□□□ -2.02
NPAS4Q8IUM7 RNA5SP489-201ENST00000410986 109 ntBASIC2.43□□□□□ -2.02
NPAS4Q8IUM7 RNU6-177P-201ENST00000411257 104 ntBASIC2.43□□□□□ -2.02
NPAS4Q8IUM7 RPL23AP42-201ENST00000471152 471 ntBASIC2.43□□□□□ -2.02
NPAS4Q8IUM7 RNU6-638P-201ENST00000516582 104 ntBASIC2.43□□□□□ -2.02
NPAS4Q8IUM7 RNU6-826P-201ENST00000516827 104 ntBASIC2.43□□□□□ -2.02
NPAS4Q8IUM7 AL357312.1-201ENST00000603879 298 ntBASIC2.43□□□□□ -2.02
NPAS4Q8IUM7 AC091304.10-201ENST00000641554 121 ntBASIC2.43□□□□□ -2.02
NPAS4Q8IUM7 Z82195.2-201ENST00000612348 18351 ntBASIC2.42□□□□□ -2.02
NPAS4Q8IUM7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NPAS4Q8IUM7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NPAS4Q8IUM7 MIR21-201ENST00000362134 72 ntBASIC2.42□□□□□ -2.02
NPAS4Q8IUM7 Y_RNA.299-201ENST00000364973 94 ntBASIC2.42□□□□□ -2.02
NPAS4Q8IUM7 RNU6-616P-201ENST00000384353 107 ntBASIC2.42□□□□□ -2.02
NPAS4Q8IUM7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
NPAS4Q8IUM7 RNU6-482P-201ENST00000391068 107 ntBASIC2.42□□□□□ -2.02
NPAS4Q8IUM7 AL023284.1-201ENST00000403956 276 ntBASIC2.42□□□□□ -2.02
NPAS4Q8IUM7 AC004941.2-201ENST00000427009 228 ntBASIC2.42□□□□□ -2.02
NPAS4Q8IUM7 MIR1270-201ENST00000459320 83 ntBASIC2.42□□□□□ -2.02
NPAS4Q8IUM7 MIR548AE2-201ENST00000583456 67 ntBASIC2.42□□□□□ -2.02
NPAS4Q8IUM7 AL096840.1-201ENST00000603287 93 ntBASIC2.42□□□□□ -2.02
NPAS4Q8IUM7 MIR8063-201ENST00000621930 81 ntBASIC2.42□□□□□ -2.02
NPAS4Q8IUM7 MIR219B-201ENST00000637023 88 ntBASIC2.42□□□□□ -2.02
NPAS4Q8IUM7 MIR653-201ENST00000385279 96 ntBASIC2.41□□□□□ -2.02
NPAS4Q8IUM7 RNU6-1190P-201ENST00000410811 104 ntBASIC2.41□□□□□ -2.02
NPAS4Q8IUM7 RNU7-67P-201ENST00000459003 62 ntBASIC2.41□□□□□ -2.02
NPAS4Q8IUM7 RNU6-917P-201ENST00000516294 104 ntBASIC2.41□□□□□ -2.02
NPAS4Q8IUM7 RNA5SP33-201ENST00000516687 98 ntBASIC2.41□□□□□ -2.02
NPAS4Q8IUM7 RNU7-53P-201ENST00000516705 60 ntBASIC2.41□□□□□ -2.02
NPAS4Q8IUM7 AC015688.6-201ENST00000577737 104 ntBASIC2.41□□□□□ -2.02
NPAS4Q8IUM7 SNORA77B-201ENST00000578179 125 ntBASIC2.41□□□□□ -2.02
NPAS4Q8IUM7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.41□□□□□ -2.02
NPAS4Q8IUM7 AC103810.8-201ENST00000607347 118 ntBASIC2.41□□□□□ -2.02
NPAS4Q8IUM7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NPAS4Q8IUM7 SNORA22.1-201ENST00000362701 134 ntBASIC2.4□□□□□ -2.03
NPAS4Q8IUM7 SNORD78.1-201ENST00000390866 65 ntBASIC2.4□□□□□ -2.03
NPAS4Q8IUM7 RNA5SP200-201ENST00000516360 103 ntBASIC2.4□□□□□ -2.03
NPAS4Q8IUM7 MIR3152-201ENST00000579801 74 ntBASIC2.4□□□□□ -2.03
NPAS4Q8IUM7 MIR4777-201ENST00000583710 86 ntBASIC2.4□□□□□ -2.03
NPAS4Q8IUM7 MIR6132-201ENST00000622083 109 ntBASIC2.4□□□□□ -2.03
NPAS4Q8IUM7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NPAS4Q8IUM7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NPAS4Q8IUM7 SNORD115-2-201ENST00000362842 82 ntBASIC2.39□□□□□ -2.03
NPAS4Q8IUM7 SNORD115-20-201ENST00000365099 82 ntBASIC2.39□□□□□ -2.03
NPAS4Q8IUM7 SNORD28B-201ENST00000390993 75 ntBASIC2.39□□□□□ -2.03
NPAS4Q8IUM7 SNORA26.6-201ENST00000391256 115 ntBASIC2.39□□□□□ -2.03
NPAS4Q8IUM7 AC096949.1-201ENST00000412047 152 ntBASIC2.39□□□□□ -2.03
NPAS4Q8IUM7 BTF3P4-201ENST00000418852 495 ntBASIC2.39□□□□□ -2.03
NPAS4Q8IUM7 RNU2-13P-201ENST00000515909 113 ntBASIC2.39□□□□□ -2.03
NPAS4Q8IUM7 MIR4791-201ENST00000607666 84 ntBASIC2.39□□□□□ -2.03
NPAS4Q8IUM7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
NPAS4Q8IUM7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
NPAS4Q8IUM7 Y_RNA.190-201ENST00000363964 101 ntBASIC2.38□□□□□ -2.03
NPAS4Q8IUM7 Y_RNA.219-201ENST00000364232 113 ntBASIC2.38□□□□□ -2.03
NPAS4Q8IUM7 RNU6-60P-201ENST00000364792 103 ntBASIC2.38□□□□□ -2.03
NPAS4Q8IUM7 SNORA67.3-201ENST00000384366 140 ntBASIC2.38□□□□□ -2.03
NPAS4Q8IUM7 SNORA18-201ENST00000384416 132 ntBASIC2.38□□□□□ -2.03
NPAS4Q8IUM7 RNU6-1065P-201ENST00000384513 106 ntBASIC2.38□□□□□ -2.03
NPAS4Q8IUM7 Y_RNA.537-201ENST00000384626 109 ntBASIC2.38□□□□□ -2.03
NPAS4Q8IUM7 MIR520C-201ENST00000385005 87 ntBASIC2.38□□□□□ -2.03
NPAS4Q8IUM7 RNU6-913P-201ENST00000390913 95 ntBASIC2.38□□□□□ -2.03
NPAS4Q8IUM7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NPAS4Q8IUM7 HSPE1P24-201ENST00000450782 238 ntBASIC2.38□□□□□ -2.03
NPAS4Q8IUM7 RPS29P29-201ENST00000456396 171 ntBASIC2.38□□□□□ -2.03
NPAS4Q8IUM7 HMGN2P23-201ENST00000456759 269 ntBASIC2.38□□□□□ -2.03
NPAS4Q8IUM7 Y_RNA.685-201ENST00000516532 108 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 225.4 ms