Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC069113.3-201ENST00000521019 150 ntBASIC0.1□□□□□ -2.39
NIPAL3Q6P499 AP003327.1-201ENST00000529684 127 ntBASIC0.1□□□□□ -2.39
NIPAL3Q6P499 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.1□□□□□ -2.39
NIPAL3Q6P499 AC113195.1-201ENST00000579952 141 ntBASIC0.1□□□□□ -2.39
NIPAL3Q6P499 AC097639.2-201ENST00000603159 172 ntBASIC0.1□□□□□ -2.39
NIPAL3Q6P499 MIR8066-201ENST00000617280 78 ntBASIC0.1□□□□□ -2.39
NIPAL3Q6P499 AL662814.1-201ENST00000617364 121 ntBASIC0.1□□□□□ -2.39
NIPAL3Q6P499 MIR4315-1-201ENST00000636800 73 ntBASIC0.1□□□□□ -2.39
NIPAL3Q6P499 MIR4315-2-201ENST00000640925 73 ntBASIC0.1□□□□□ -2.39
NIPAL3Q6P499 Y_RNA.42-201ENST00000362660 108 ntBASIC0.09□□□□□ -2.4
NIPAL3Q6P499 Y_RNA.84-201ENST00000363011 104 ntBASIC0.09□□□□□ -2.4
NIPAL3Q6P499 Y_RNA.199-201ENST00000364014 102 ntBASIC0.09□□□□□ -2.4
NIPAL3Q6P499 RNU6-815P-201ENST00000384080 113 ntBASIC0.09□□□□□ -2.4
NIPAL3Q6P499 Y_RNA.454-201ENST00000384224 113 ntBASIC0.09□□□□□ -2.4
NIPAL3Q6P499 Y_RNA.460-201ENST00000384255 102 ntBASIC0.09□□□□□ -2.4
NIPAL3Q6P499 MT-TT-201ENST00000387460 66 ntBASIC0.09□□□□□ -2.4
NIPAL3Q6P499 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
NIPAL3Q6P499 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.09□□□□□ -2.4
NIPAL3Q6P499 AL512326.2-201ENST00000426359 151 ntBASIC0.09□□□□□ -2.4
NIPAL3Q6P499 SNRPGP8-201ENST00000454064 226 ntBASIC0.09□□□□□ -2.4
NIPAL3Q6P499 MIR3152-201ENST00000579801 74 ntBASIC0.09□□□□□ -2.4
NIPAL3Q6P499 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.08□□□□□ -2.4
NIPAL3Q6P499 RNU6-403P-201ENST00000363163 104 ntBASIC0.08□□□□□ -2.4
NIPAL3Q6P499 SNORA1-201ENST00000384107 130 ntBASIC0.08□□□□□ -2.4
NIPAL3Q6P499 Y_RNA.509-201ENST00000384506 99 ntBASIC0.08□□□□□ -2.4
NIPAL3Q6P499 MIR613-201ENST00000385248 95 ntBASIC0.08□□□□□ -2.4
NIPAL3Q6P499 MIR644A-201ENST00000385262 94 ntBASIC0.08□□□□□ -2.4
NIPAL3Q6P499 AL606845.1-201ENST00000404881 255 ntBASIC0.08□□□□□ -2.4
NIPAL3Q6P499 RNU2-59P-201ENST00000410482 191 ntBASIC0.08□□□□□ -2.4
NIPAL3Q6P499 Y_RNA.617-201ENST00000410920 90 ntBASIC0.08□□□□□ -2.4
NIPAL3Q6P499 AC112693.2-201ENST00000556538 232 ntBASIC0.08□□□□□ -2.4
NIPAL3Q6P499 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.08□□□□□ -2.4
NIPAL3Q6P499 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.08□□□□□ -2.4
NIPAL3Q6P499 Y_RNA.117-201ENST00000363294 101 ntBASIC0.07□□□□□ -2.4
NIPAL3Q6P499 SNORA36.1-201ENST00000363424 132 ntBASIC0.07□□□□□ -2.4
NIPAL3Q6P499 RNU4-67P-201ENST00000364569 141 ntBASIC0.07□□□□□ -2.4
NIPAL3Q6P499 SNORA20-201ENST00000384662 132 ntBASIC0.07□□□□□ -2.4
NIPAL3Q6P499 MIR193B-201ENST00000384907 83 ntBASIC0.07□□□□□ -2.4
NIPAL3Q6P499 AC134503.1-201ENST00000633048 54 ntBASIC0.07□□□□□ -2.4
NIPAL3Q6P499 MTND4P29-201ENST00000503122 1372 ntBASIC0.06□□□□□ -2.4
NIPAL3Q6P499 AL596211.1-201ENST00000569873 2277 ntBASIC0.06□□□□□ -2.4
NIPAL3Q6P499 Y_RNA.13-201ENST00000362403 112 ntBASIC0.06□□□□□ -2.4
NIPAL3Q6P499 MIR616-201ENST00000385293 97 ntBASIC0.06□□□□□ -2.4
NIPAL3Q6P499 RNU6-1228P-201ENST00000391014 107 ntBASIC0.06□□□□□ -2.4
NIPAL3Q6P499 MTND5P22-201ENST00000458380 195 ntBASIC0.06□□□□□ -2.4
NIPAL3Q6P499 SNORA62.5-201ENST00000516634 120 ntBASIC0.06□□□□□ -2.4
NIPAL3Q6P499 RNA5SP268-201ENST00000516828 124 ntBASIC0.06□□□□□ -2.4
NIPAL3Q6P499 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.06□□□□□ -2.4
NIPAL3Q6P499 MIR3129-201ENST00000581095 76 ntBASIC0.06□□□□□ -2.4
NIPAL3Q6P499 AC091932.4-201ENST00000623386 200 ntBASIC0.06□□□□□ -2.4
NIPAL3Q6P499 Y_RNA.23-201ENST00000362496 106 ntBASIC0.05□□□□□ -2.4
NIPAL3Q6P499 Y_RNA.44-201ENST00000362676 108 ntBASIC0.05□□□□□ -2.4
NIPAL3Q6P499 Y_RNA.174-201ENST00000363781 105 ntBASIC0.05□□□□□ -2.4
NIPAL3Q6P499 RNU5E-4P-201ENST00000364931 120 ntBASIC0.05□□□□□ -2.4
NIPAL3Q6P499 Y_RNA.430-201ENST00000384081 110 ntBASIC0.05□□□□□ -2.4
NIPAL3Q6P499 Y_RNA.542-201ENST00000384641 111 ntBASIC0.05□□□□□ -2.4
NIPAL3Q6P499 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
NIPAL3Q6P499 MIR548P-201ENST00000408336 84 ntBASIC0.05□□□□□ -2.4
NIPAL3Q6P499 SNORA79-201ENST00000408376 140 ntBASIC0.05□□□□□ -2.4
NIPAL3Q6P499 RNU6-1203P-201ENST00000410703 110 ntBASIC0.05□□□□□ -2.4
NIPAL3Q6P499 Y_RNA.711-201ENST00000516993 102 ntBASIC0.05□□□□□ -2.4
NIPAL3Q6P499 MIR5197-201ENST00000583721 112 ntBASIC0.05□□□□□ -2.4
NIPAL3Q6P499 AC023932.2-201ENST00000603176 175 ntBASIC0.05□□□□□ -2.4
NIPAL3Q6P499 MIR6082-201ENST00000613604 109 ntBASIC0.05□□□□□ -2.4
NIPAL3Q6P499 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
NIPAL3Q6P499 Y_RNA.36-201ENST00000362602 112 ntBASIC0.04□□□□□ -2.4
NIPAL3Q6P499 RNU6-597P-201ENST00000365620 102 ntBASIC0.04□□□□□ -2.4
NIPAL3Q6P499 U8.15-201ENST00000390947 134 ntBASIC0.04□□□□□ -2.4
NIPAL3Q6P499 Y_RNA.618-201ENST00000410949 107 ntBASIC0.04□□□□□ -2.4
NIPAL3Q6P499 RNU6-135P-201ENST00000516769 101 ntBASIC0.04□□□□□ -2.4
NIPAL3Q6P499 RNU7-70P-201ENST00000516941 66 ntBASIC0.04□□□□□ -2.4
NIPAL3Q6P499 MIR376A2-201ENST00000636782 80 ntBASIC0.04□□□□□ -2.4
NIPAL3Q6P499 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
NIPAL3Q6P499 RNU6-1229P-201ENST00000364295 107 ntBASIC0.03□□□□□ -2.4
NIPAL3Q6P499 snoU2_19.4-201ENST00000364329 80 ntBASIC0.03□□□□□ -2.4
NIPAL3Q6P499 SNORA72.6-201ENST00000384520 129 ntBASIC0.03□□□□□ -2.4
NIPAL3Q6P499 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.03□□□□□ -2.4
NIPAL3Q6P499 MTATP6P23-201ENST00000440153 476 ntBASIC0.03□□□□□ -2.4
NIPAL3Q6P499 RNU6-453P-201ENST00000516819 85 ntBASIC0.03□□□□□ -2.4
NIPAL3Q6P499 RNU6-570P-201ENST00000517051 105 ntBASIC0.03□□□□□ -2.4
NIPAL3Q6P499 AC141846.1-201ENST00000568348 142 ntBASIC0.03□□□□□ -2.4
NIPAL3Q6P499 MIR4680-201ENST00000580906 66 ntBASIC0.03□□□□□ -2.4
NIPAL3Q6P499 MIR6718-201ENST00000616153 80 ntBASIC0.03□□□□□ -2.4
NIPAL3Q6P499 Y_RNA.32-201ENST00000362589 110 ntBASIC0.02□□□□□ -2.41
NIPAL3Q6P499 SEPT7P4-201ENST00000437076 306 ntBASIC0.02□□□□□ -2.41
NIPAL3Q6P499 RNU6-765P-201ENST00000516916 99 ntBASIC0.02□□□□□ -2.41
NIPAL3Q6P499 MIR1273G-201ENST00000577677 100 ntBASIC0.02□□□□□ -2.41
NIPAL3Q6P499 MIR7111-201ENST00000619751 72 ntBASIC0.02□□□□□ -2.41
NIPAL3Q6P499 SNORA9.1-201ENST00000362412 131 ntBASIC0.01□□□□□ -2.41
NIPAL3Q6P499 Y_RNA.153-201ENST00000363615 91 ntBASIC0.01□□□□□ -2.41
NIPAL3Q6P499 Y_RNA.476-201ENST00000384347 108 ntBASIC0.01□□□□□ -2.41
NIPAL3Q6P499 Y_RNA.588-201ENST00000391254 102 ntBASIC0.01□□□□□ -2.41
NIPAL3Q6P499 SNORD2.1-201ENST00000458762 69 ntBASIC0.01□□□□□ -2.41
NIPAL3Q6P499 RNA5SP227-201ENST00000516184 113 ntBASIC0.01□□□□□ -2.41
NIPAL3Q6P499 SNORA31.14-201ENST00000516728 116 ntBASIC0.01□□□□□ -2.41
NIPAL3Q6P499 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.01□□□□□ -2.41
NIPAL3Q6P499 MIR4491-201ENST00000581087 68 ntBASIC0.01□□□□□ -2.41
NIPAL3Q6P499 SNORA22.1-201ENST00000362701 134 ntBASIC0□□□□□ -2.41
NIPAL3Q6P499 Y_RNA.138-201ENST00000363462 102 ntBASIC0□□□□□ -2.41
NIPAL3Q6P499 SNORA42.1-201ENST00000363515 137 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 226.2 ms