Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 Y_RNA.117-201ENST00000363294 101 ntBASIC0.45□□□□□ -2.34
RPUSD3Q6P087 SNORD100-201ENST00000408573 76 ntBASIC0.45□□□□□ -2.34
RPUSD3Q6P087 Y_RNA.622-201ENST00000411091 108 ntBASIC0.45□□□□□ -2.34
RPUSD3Q6P087 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
RPUSD3Q6P087 HMGN1P33-201ENST00000432945 451 ntBASIC0.45□□□□□ -2.34
RPUSD3Q6P087 RNU6-229P-201ENST00000516614 102 ntBASIC0.45□□□□□ -2.34
RPUSD3Q6P087 AC090897.1-201ENST00000580909 226 ntBASIC0.45□□□□□ -2.34
RPUSD3Q6P087 AC243829.6-201ENST00000612652 106 ntBASIC0.45□□□□□ -2.34
RPUSD3Q6P087 AC092634.7-201ENST00000621022 103 ntBASIC0.45□□□□□ -2.34
RPUSD3Q6P087 MIR342-201ENST00000362212 99 ntBASIC0.44□□□□□ -2.34
RPUSD3Q6P087 RNU6-740P-201ENST00000364734 105 ntBASIC0.44□□□□□ -2.34
RPUSD3Q6P087 RNU6-728P-201ENST00000365375 104 ntBASIC0.44□□□□□ -2.34
RPUSD3Q6P087 Y_RNA.351-201ENST00000365436 96 ntBASIC0.44□□□□□ -2.34
RPUSD3Q6P087 VTRNA1-3-201ENST00000365645 89 ntBASIC0.44□□□□□ -2.34
RPUSD3Q6P087 Y_RNA.572-201ENST00000384757 98 ntBASIC0.44□□□□□ -2.34
RPUSD3Q6P087 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
RPUSD3Q6P087 MIR1302-6-201ENST00000408466 90 ntBASIC0.44□□□□□ -2.34
RPUSD3Q6P087 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.44□□□□□ -2.34
RPUSD3Q6P087 AC015818.7-201ENST00000428754 109 ntBASIC0.44□□□□□ -2.34
RPUSD3Q6P087 AC087499.7-201ENST00000441958 109 ntBASIC0.44□□□□□ -2.34
RPUSD3Q6P087 SNRPGP8-201ENST00000454064 226 ntBASIC0.44□□□□□ -2.34
RPUSD3Q6P087 RNU6-1137P-201ENST00000517073 99 ntBASIC0.44□□□□□ -2.34
RPUSD3Q6P087 RNU7-156P-201ENST00000517214 74 ntBASIC0.44□□□□□ -2.34
RPUSD3Q6P087 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.44□□□□□ -2.34
RPUSD3Q6P087 Y_RNA.91-201ENST00000363042 107 ntBASIC0.43□□□□□ -2.34
RPUSD3Q6P087 Y_RNA.237-201ENST00000364439 102 ntBASIC0.43□□□□□ -2.34
RPUSD3Q6P087 RNA5SP117-201ENST00000365294 118 ntBASIC0.43□□□□□ -2.34
RPUSD3Q6P087 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
RPUSD3Q6P087 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
RPUSD3Q6P087 MIR563-201ENST00000385080 79 ntBASIC0.43□□□□□ -2.34
RPUSD3Q6P087 Y_RNA.604-201ENST00000410574 102 ntBASIC0.43□□□□□ -2.34
RPUSD3Q6P087 SNORD71-201ENST00000411292 86 ntBASIC0.43□□□□□ -2.34
RPUSD3Q6P087 SNORD92-201ENST00000585078 85 ntBASIC0.43□□□□□ -2.34
RPUSD3Q6P087 AP001282.2-201ENST00000616149 309 ntBASIC0.43□□□□□ -2.34
RPUSD3Q6P087 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
RPUSD3Q6P087 RNU6-1227P-201ENST00000383981 107 ntBASIC0.42□□□□□ -2.34
RPUSD3Q6P087 MT-TT-201ENST00000387460 66 ntBASIC0.42□□□□□ -2.34
RPUSD3Q6P087 Y_RNA.618-201ENST00000410949 107 ntBASIC0.42□□□□□ -2.34
RPUSD3Q6P087 MTCYBP6-201ENST00000441810 138 ntBASIC0.42□□□□□ -2.34
RPUSD3Q6P087 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.42□□□□□ -2.34
RPUSD3Q6P087 RNU7-102P-201ENST00000458948 62 ntBASIC0.42□□□□□ -2.34
RPUSD3Q6P087 RNU7-70P-201ENST00000516941 66 ntBASIC0.42□□□□□ -2.34
RPUSD3Q6P087 MIR6717-201ENST00000622747 73 ntBASIC0.42□□□□□ -2.34
RPUSD3Q6P087 RNU6-653P-201ENST00000363074 106 ntBASIC0.41□□□□□ -2.34
RPUSD3Q6P087 RNU6-103P-201ENST00000363686 107 ntBASIC0.41□□□□□ -2.34
RPUSD3Q6P087 Y_RNA.304-201ENST00000365011 112 ntBASIC0.41□□□□□ -2.34
RPUSD3Q6P087 SNORA20-201ENST00000384662 132 ntBASIC0.41□□□□□ -2.34
RPUSD3Q6P087 RNA5SP237-201ENST00000410414 113 ntBASIC0.41□□□□□ -2.34
RPUSD3Q6P087 RNA5SP330-201ENST00000517096 96 ntBASIC0.41□□□□□ -2.34
RPUSD3Q6P087 MIR8087-201ENST00000612745 78 ntBASIC0.41□□□□□ -2.34
RPUSD3Q6P087 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
RPUSD3Q6P087 RNU4-17P-201ENST00000365598 141 ntBASIC0.4□□□□□ -2.35
RPUSD3Q6P087 RNY1P8-201ENST00000383970 114 ntBASIC0.4□□□□□ -2.35
RPUSD3Q6P087 SNORA25.12-201ENST00000516202 82 ntBASIC0.4□□□□□ -2.35
RPUSD3Q6P087 Y_RNA.258-201ENST00000364613 105 ntBASIC0.39□□□□□ -2.35
RPUSD3Q6P087 Y_RNA.262-201ENST00000364641 102 ntBASIC0.39□□□□□ -2.35
RPUSD3Q6P087 RNU6-1292P-201ENST00000383856 107 ntBASIC0.39□□□□□ -2.35
RPUSD3Q6P087 RNU6-679P-201ENST00000391003 106 ntBASIC0.39□□□□□ -2.35
RPUSD3Q6P087 AC002350.1-201ENST00000490759 375 ntBASIC0.39□□□□□ -2.35
RPUSD3Q6P087 RNU6-635P-201ENST00000516651 102 ntBASIC0.39□□□□□ -2.35
RPUSD3Q6P087 RNU6-448P-201ENST00000517052 107 ntBASIC0.39□□□□□ -2.35
RPUSD3Q6P087 MIR4282-201ENST00000583613 67 ntBASIC0.39□□□□□ -2.35
RPUSD3Q6P087 MIR5197-201ENST00000583721 112 ntBASIC0.39□□□□□ -2.35
RPUSD3Q6P087 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.39□□□□□ -2.35
RPUSD3Q6P087 uc_338.6-201ENST00000613544 171 ntBASIC0.39□□□□□ -2.35
RPUSD3Q6P087 AL365265.1-201ENST00000621045 234 ntBASIC0.39□□□□□ -2.35
RPUSD3Q6P087 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.38□□□□□ -2.35
RPUSD3Q6P087 Y_RNA.115-201ENST00000363272 98 ntBASIC0.38□□□□□ -2.35
RPUSD3Q6P087 SNORD18A-201ENST00000363753 72 ntBASIC0.38□□□□□ -2.35
RPUSD3Q6P087 snoU2_19.4-201ENST00000364329 80 ntBASIC0.38□□□□□ -2.35
RPUSD3Q6P087 Y_RNA.430-201ENST00000384081 110 ntBASIC0.38□□□□□ -2.35
RPUSD3Q6P087 SNORD12C-201ENST00000386307 89 ntBASIC0.38□□□□□ -2.35
RPUSD3Q6P087 SNORA40.8-201ENST00000411034 126 ntBASIC0.38□□□□□ -2.35
RPUSD3Q6P087 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.38□□□□□ -2.35
RPUSD3Q6P087 AC006504.6-201ENST00000590142 199 ntBASIC0.38□□□□□ -2.35
RPUSD3Q6P087 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.38□□□□□ -2.35
RPUSD3Q6P087 MIRLET7D-201ENST00000362263 87 ntBASIC0.37□□□□□ -2.35
RPUSD3Q6P087 SNORD93-201ENST00000408813 74 ntBASIC0.37□□□□□ -2.35
RPUSD3Q6P087 AL358176.2-201ENST00000425769 204 ntBASIC0.37□□□□□ -2.35
RPUSD3Q6P087 RNU6-893P-201ENST00000458841 100 ntBASIC0.37□□□□□ -2.35
RPUSD3Q6P087 RNA5SP134-201ENST00000516492 96 ntBASIC0.37□□□□□ -2.35
RPUSD3Q6P087 MIR8062-201ENST00000621515 85 ntBASIC0.37□□□□□ -2.35
RPUSD3Q6P087 MIR30D-201ENST00000362283 70 ntBASIC0.36□□□□□ -2.35
RPUSD3Q6P087 Y_RNA.85-201ENST00000363014 111 ntBASIC0.36□□□□□ -2.35
RPUSD3Q6P087 Y_RNA.176-201ENST00000363815 109 ntBASIC0.36□□□□□ -2.35
RPUSD3Q6P087 SNORA1-201ENST00000384107 130 ntBASIC0.36□□□□□ -2.35
RPUSD3Q6P087 Y_RNA.515-201ENST00000384535 112 ntBASIC0.36□□□□□ -2.35
RPUSD3Q6P087 RNU6-381P-201ENST00000391259 108 ntBASIC0.36□□□□□ -2.35
RPUSD3Q6P087 RNU6-1190P-201ENST00000410811 104 ntBASIC0.36□□□□□ -2.35
RPUSD3Q6P087 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.36□□□□□ -2.35
RPUSD3Q6P087 RNU6-469P-201ENST00000516253 101 ntBASIC0.36□□□□□ -2.35
RPUSD3Q6P087 RNU6-453P-201ENST00000516819 85 ntBASIC0.36□□□□□ -2.35
RPUSD3Q6P087 MIR3129-201ENST00000581095 76 ntBASIC0.36□□□□□ -2.35
RPUSD3Q6P087 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.36□□□□□ -2.35
RPUSD3Q6P087 AL109933.3-201ENST00000619095 188 ntBASIC0.36□□□□□ -2.35
RPUSD3Q6P087 Y_RNA.23-201ENST00000362496 106 ntBASIC0.35□□□□□ -2.35
RPUSD3Q6P087 RNU6-1099P-201ENST00000363533 107 ntBASIC0.35□□□□□ -2.35
RPUSD3Q6P087 RNU6-1327P-201ENST00000365302 105 ntBASIC0.35□□□□□ -2.35
RPUSD3Q6P087 Y_RNA.352-201ENST00000365439 102 ntBASIC0.35□□□□□ -2.35
RPUSD3Q6P087 Y_RNA.461-201ENST00000384263 103 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 240.9 ms