Protein–RNA interactions for Protein: Q3V6T2

CCDC88A, Girdin, humanhuman

Predictions only

Length 1,871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88AQ3V6T2 SNORD114-11-201ENST00000363738 75 ntBASIC-0.71□□□□□ -2.52
CCDC88AQ3V6T2 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.71□□□□□ -2.52
CCDC88AQ3V6T2 RNU6-429P-201ENST00000384582 108 ntBASIC-0.71□□□□□ -2.52
CCDC88AQ3V6T2 MIR196A1-201ENST00000388006 70 ntBASIC-0.71□□□□□ -2.52
CCDC88AQ3V6T2 AC244250.2-201ENST00000418731 148 ntBASIC-0.71□□□□□ -2.52
CCDC88AQ3V6T2 U8.20-201ENST00000459445 131 ntBASIC-0.71□□□□□ -2.52
CCDC88AQ3V6T2 RNA5SP461-201ENST00000516451 104 ntBASIC-0.71□□□□□ -2.52
CCDC88AQ3V6T2 AC084368.1-201ENST00000620935 65 ntBASIC-0.71□□□□□ -2.52
CCDC88AQ3V6T2 AC099654.14-201ENST00000638599 341 ntBASIC-0.71□□□□□ -2.52
CCDC88AQ3V6T2 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.71□□□□□ -2.52
CCDC88AQ3V6T2 PMCHL1-202ENST00000423102 261 ntBASIC-0.71□□□□□ -2.52
CCDC88AQ3V6T2 AC099799.1-201ENST00000439809 192 ntBASIC-0.71□□□□□ -2.52
CCDC88AQ3V6T2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.71□□□□□ -2.52
CCDC88AQ3V6T2 MIR4432-201ENST00000581823 84 ntBASIC-0.71□□□□□ -2.52
CCDC88AQ3V6T2 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.71□□□□□ -2.52
CCDC88AQ3V6T2 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.71□□□□□ -2.52
CCDC88AQ3V6T2 MIR4788-201ENST00000639104 80 ntBASIC-0.71□□□□□ -2.52
CCDC88AQ3V6T2 RNU7-80P-201ENST00000459562 61 ntBASIC-0.72□□□□□ -2.52
CCDC88AQ3V6T2 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.72□□□□□ -2.52
CCDC88AQ3V6T2 RNU7-30P-201ENST00000516835 62 ntBASIC-0.72□□□□□ -2.52
CCDC88AQ3V6T2 AC245505.1-201ENST00000556398 224 ntBASIC-0.72□□□□□ -2.52
CCDC88AQ3V6T2 MIR655-201ENST00000362159 97 ntBASIC-0.73□□□□□ -2.53
CCDC88AQ3V6T2 BX276092.1-201ENST00000427368 251 ntBASIC-0.73□□□□□ -2.53
CCDC88AQ3V6T2 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.73□□□□□ -2.53
CCDC88AQ3V6T2 RNU7-169P-201ENST00000459456 61 ntBASIC-0.73□□□□□ -2.53
CCDC88AQ3V6T2 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.73□□□□□ -2.53
CCDC88AQ3V6T2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.73□□□□□ -2.53
CCDC88AQ3V6T2 DEFB131E-201ENST00000532329 154 ntBASIC-0.73□□□□□ -2.53
CCDC88AQ3V6T2 MIR3145-201ENST00000580727 82 ntBASIC-0.73□□□□□ -2.53
CCDC88AQ3V6T2 SNORD113-5-201ENST00000607261 78 ntBASIC-0.73□□□□□ -2.53
CCDC88AQ3V6T2 MIR148A-201ENST00000362215 68 ntBASIC-0.73□□□□□ -2.53
CCDC88AQ3V6T2 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.73□□□□□ -2.53
CCDC88AQ3V6T2 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.73□□□□□ -2.53
CCDC88AQ3V6T2 RNU6-597P-201ENST00000365620 102 ntBASIC-0.73□□□□□ -2.53
CCDC88AQ3V6T2 SNORD63-201ENST00000384262 68 ntBASIC-0.73□□□□□ -2.53
CCDC88AQ3V6T2 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.73□□□□□ -2.53
CCDC88AQ3V6T2 MTCO2P24-201ENST00000515611 426 ntBASIC-0.73□□□□□ -2.53
CCDC88AQ3V6T2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.73□□□□□ -2.53
CCDC88AQ3V6T2 U2.1-201ENST00000618978 145 ntBASIC-0.73□□□□□ -2.53
CCDC88AQ3V6T2 SNORA22B-201ENST00000383876 138 ntBASIC-0.74□□□□□ -2.53
CCDC88AQ3V6T2 SNORA1-201ENST00000384107 130 ntBASIC-0.74□□□□□ -2.53
CCDC88AQ3V6T2 AL590004.1-201ENST00000405321 300 ntBASIC-0.74□□□□□ -2.53
CCDC88AQ3V6T2 RNU6-383P-201ENST00000410864 94 ntBASIC-0.74□□□□□ -2.53
CCDC88AQ3V6T2 MTND4LP30-201ENST00000454092 297 ntBASIC-0.74□□□□□ -2.53
CCDC88AQ3V6T2 AC010655.3-201ENST00000478818 450 ntBASIC-0.74□□□□□ -2.53
CCDC88AQ3V6T2 AC133104.2-201ENST00000615272 193 ntBASIC-0.74□□□□□ -2.53
CCDC88AQ3V6T2 AC091932.4-201ENST00000623386 200 ntBASIC-0.74□□□□□ -2.53
CCDC88AQ3V6T2 MIR4320-201ENST00000636981 65 ntBASIC-0.74□□□□□ -2.53
CCDC88AQ3V6T2 Y_RNA.51-201ENST00000362725 102 ntBASIC-0.75□□□□□ -2.53
CCDC88AQ3V6T2 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.75□□□□□ -2.53
CCDC88AQ3V6T2 RNU4-50P-201ENST00000364361 141 ntBASIC-0.75□□□□□ -2.53
CCDC88AQ3V6T2 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.75□□□□□ -2.53
CCDC88AQ3V6T2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.75□□□□□ -2.53
CCDC88AQ3V6T2 SNORA25.16-201ENST00000516741 121 ntBASIC-0.75□□□□□ -2.53
CCDC88AQ3V6T2 AL049861.1-201ENST00000603130 150 ntBASIC-0.75□□□□□ -2.53
CCDC88AQ3V6T2 AL590491.3-201ENST00000610731 82 ntBASIC-0.75□□□□□ -2.53
CCDC88AQ3V6T2 AL138825.1-201ENST00000618587 192 ntBASIC-0.75□□□□□ -2.53
CCDC88AQ3V6T2 RNU6-888P-201ENST00000363010 101 ntBASIC-0.75□□□□□ -2.53
CCDC88AQ3V6T2 RNA5SP245-201ENST00000364239 121 ntBASIC-0.75□□□□□ -2.53
CCDC88AQ3V6T2 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.75□□□□□ -2.53
CCDC88AQ3V6T2 SNORD114-3-201ENST00000364969 75 ntBASIC-0.75□□□□□ -2.53
CCDC88AQ3V6T2 RNU6-831P-201ENST00000384548 107 ntBASIC-0.75□□□□□ -2.53
CCDC88AQ3V6T2 RNY1P7-201ENST00000384743 110 ntBASIC-0.75□□□□□ -2.53
CCDC88AQ3V6T2 AC141846.1-201ENST00000568348 142 ntBASIC-0.75□□□□□ -2.53
CCDC88AQ3V6T2 RNU6-845P-201ENST00000362578 103 ntBASIC-0.76□□□□□ -2.53
CCDC88AQ3V6T2 RNA5SP133-201ENST00000363368 119 ntBASIC-0.76□□□□□ -2.53
CCDC88AQ3V6T2 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.76□□□□□ -2.53
CCDC88AQ3V6T2 RNA5SP192-201ENST00000364404 120 ntBASIC-0.76□□□□□ -2.53
CCDC88AQ3V6T2 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.76□□□□□ -2.53
CCDC88AQ3V6T2 SNORD61-201ENST00000384252 73 ntBASIC-0.76□□□□□ -2.53
CCDC88AQ3V6T2 MTND1P14-201ENST00000427400 950 ntBASIC-0.76□□□□□ -2.53
CCDC88AQ3V6T2 SUMO1P3-201ENST00000439961 304 ntBASIC-0.76□□□□□ -2.53
CCDC88AQ3V6T2 AC114755.3-201ENST00000481111 251 ntBASIC-0.76□□□□□ -2.53
CCDC88AQ3V6T2 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-0.76□□□□□ -2.53
CCDC88AQ3V6T2 SCARNA17-201ENST00000516183 144 ntBASIC-0.76□□□□□ -2.53
CCDC88AQ3V6T2 SNORA40.14-201ENST00000516543 86 ntBASIC-0.76□□□□□ -2.53
CCDC88AQ3V6T2 Y_RNA.688-201ENST00000516565 95 ntBASIC-0.76□□□□□ -2.53
CCDC88AQ3V6T2 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.76□□□□□ -2.53
CCDC88AQ3V6T2 MIR5690-201ENST00000583739 73 ntBASIC-0.76□□□□□ -2.53
CCDC88AQ3V6T2 MIR6738-201ENST00000619620 64 ntBASIC-0.76□□□□□ -2.53
CCDC88AQ3V6T2 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.77□□□□□ -2.53
CCDC88AQ3V6T2 MIR587-201ENST00000384845 96 ntBASIC-0.77□□□□□ -2.53
CCDC88AQ3V6T2 RNU6-284P-201ENST00000411105 106 ntBASIC-0.77□□□□□ -2.53
CCDC88AQ3V6T2 SNORD2-201ENST00000459163 69 ntBASIC-0.77□□□□□ -2.53
CCDC88AQ3V6T2 AC097639.2-201ENST00000603159 172 ntBASIC-0.77□□□□□ -2.53
CCDC88AQ3V6T2 AC113139.1-201ENST00000605049 239 ntBASIC-0.77□□□□□ -2.53
CCDC88AQ3V6T2 AL121655.1-201ENST00000605811 308 ntBASIC-0.77□□□□□ -2.53
CCDC88AQ3V6T2 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.77□□□□□ -2.53
CCDC88AQ3V6T2 RNU7-10P-201ENST00000607194 63 ntBASIC-0.77□□□□□ -2.53
CCDC88AQ3V6T2 AC069503.3-201ENST00000618674 145 ntBASIC-0.77□□□□□ -2.53
CCDC88AQ3V6T2 RNA5SP205-201ENST00000364653 136 ntBASIC-0.78□□□□□ -2.53
CCDC88AQ3V6T2 MIR617-201ENST00000385030 97 ntBASIC-0.78□□□□□ -2.53
CCDC88AQ3V6T2 RNU6-308P-201ENST00000390957 107 ntBASIC-0.78□□□□□ -2.53
CCDC88AQ3V6T2 MIR548F5-201ENST00000408421 86 ntBASIC-0.78□□□□□ -2.53
CCDC88AQ3V6T2 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.78□□□□□ -2.53
CCDC88AQ3V6T2 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.78□□□□□ -2.53
CCDC88AQ3V6T2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.78□□□□□ -2.53
CCDC88AQ3V6T2 AC108059.2-201ENST00000434626 151 ntBASIC-0.78□□□□□ -2.53
CCDC88AQ3V6T2 SEPT14P8-201ENST00000508026 178 ntBASIC-0.78□□□□□ -2.53
CCDC88AQ3V6T2 RNU6-531P-201ENST00000516694 104 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms