Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MIR8062-201ENST00000621515 85 ntBASIC0.52□□□□□ -2.33
SHROOM1Q2M3G4 MIR5087-201ENST00000635826 76 ntBASIC0.52□□□□□ -2.33
SHROOM1Q2M3G4 MIR376A2-201ENST00000636782 80 ntBASIC0.52□□□□□ -2.33
SHROOM1Q2M3G4 Y_RNA.277-201ENST00000364754 102 ntBASIC0.51□□□□□ -2.33
SHROOM1Q2M3G4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
SHROOM1Q2M3G4 Y_RNA.396-201ENST00000383949 103 ntBASIC0.51□□□□□ -2.33
SHROOM1Q2M3G4 RNU6-1189P-201ENST00000383958 107 ntBASIC0.51□□□□□ -2.33
SHROOM1Q2M3G4 SNORD77.3-201ENST00000391113 65 ntBASIC0.51□□□□□ -2.33
SHROOM1Q2M3G4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.51□□□□□ -2.33
SHROOM1Q2M3G4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.51□□□□□ -2.33
SHROOM1Q2M3G4 MIR3129-201ENST00000581095 76 ntBASIC0.51□□□□□ -2.33
SHROOM1Q2M3G4 AC008737.2-201ENST00000599446 118 ntBASIC0.51□□□□□ -2.33
SHROOM1Q2M3G4 Z97988.1-201ENST00000637697 135 ntBASIC0.51□□□□□ -2.33
SHROOM1Q2M3G4 Y_RNA.440-201ENST00000384120 114 ntBASIC0.5□□□□□ -2.33
SHROOM1Q2M3G4 RNY3P5-201ENST00000384127 102 ntBASIC0.5□□□□□ -2.33
SHROOM1Q2M3G4 RNU6-1160P-201ENST00000384546 104 ntBASIC0.5□□□□□ -2.33
SHROOM1Q2M3G4 MIR606-201ENST00000384851 96 ntBASIC0.5□□□□□ -2.33
SHROOM1Q2M3G4 MIR573-201ENST00000384964 99 ntBASIC0.5□□□□□ -2.33
SHROOM1Q2M3G4 SNORA26-201ENST00000391286 122 ntBASIC0.5□□□□□ -2.33
SHROOM1Q2M3G4 MIR548I3-201ENST00000408378 149 ntBASIC0.5□□□□□ -2.33
SHROOM1Q2M3G4 RNU6-998P-201ENST00000515894 101 ntBASIC0.5□□□□□ -2.33
SHROOM1Q2M3G4 RNY3P16-201ENST00000516338 101 ntBASIC0.5□□□□□ -2.33
SHROOM1Q2M3G4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.5□□□□□ -2.33
SHROOM1Q2M3G4 AC006504.6-201ENST00000590142 199 ntBASIC0.5□□□□□ -2.33
SHROOM1Q2M3G4 AC097639.2-201ENST00000603159 172 ntBASIC0.5□□□□□ -2.33
SHROOM1Q2M3G4 AL162730.1-201ENST00000605734 292 ntBASIC0.5□□□□□ -2.33
SHROOM1Q2M3G4 MIR302B-201ENST00000362188 73 ntBASIC0.49□□□□□ -2.33
SHROOM1Q2M3G4 SNORA63C-201ENST00000364578 129 ntBASIC0.49□□□□□ -2.33
SHROOM1Q2M3G4 Y_RNA.351-201ENST00000365436 96 ntBASIC0.49□□□□□ -2.33
SHROOM1Q2M3G4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.49□□□□□ -2.33
SHROOM1Q2M3G4 RNU6-472P-201ENST00000384299 107 ntBASIC0.49□□□□□ -2.33
SHROOM1Q2M3G4 Y_RNA.574-201ENST00000384766 95 ntBASIC0.49□□□□□ -2.33
SHROOM1Q2M3G4 RNU6-1237P-201ENST00000384777 107 ntBASIC0.49□□□□□ -2.33
SHROOM1Q2M3G4 MIR616-201ENST00000385293 97 ntBASIC0.49□□□□□ -2.33
SHROOM1Q2M3G4 RNU6-1165P-201ENST00000410119 107 ntBASIC0.49□□□□□ -2.33
SHROOM1Q2M3G4 RNU7-56P-201ENST00000458744 62 ntBASIC0.49□□□□□ -2.33
SHROOM1Q2M3G4 RN7SKP12-201ENST00000516275 143 ntBASIC0.49□□□□□ -2.33
SHROOM1Q2M3G4 RNA5SP153-201ENST00000516498 76 ntBASIC0.49□□□□□ -2.33
SHROOM1Q2M3G4 MIR3612-201ENST00000579753 87 ntBASIC0.49□□□□□ -2.33
SHROOM1Q2M3G4 AC008608.1-201ENST00000603910 127 ntBASIC0.49□□□□□ -2.33
SHROOM1Q2M3G4 AC243829.6-201ENST00000612652 106 ntBASIC0.49□□□□□ -2.33
SHROOM1Q2M3G4 MIR2909-201ENST00000617113 69 ntBASIC0.49□□□□□ -2.33
SHROOM1Q2M3G4 RNA5SP257-201ENST00000363023 116 ntBASIC0.48□□□□□ -2.33
SHROOM1Q2M3G4 RNU6-679P-201ENST00000391003 106 ntBASIC0.48□□□□□ -2.33
SHROOM1Q2M3G4 RNU7-96P-201ENST00000459535 64 ntBASIC0.48□□□□□ -2.33
SHROOM1Q2M3G4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
SHROOM1Q2M3G4 MIR18A-201ENST00000362310 71 ntBASIC0.47□□□□□ -2.33
SHROOM1Q2M3G4 Y_RNA.76-201ENST00000362931 109 ntBASIC0.47□□□□□ -2.33
SHROOM1Q2M3G4 RNU6-597P-201ENST00000365620 102 ntBASIC0.47□□□□□ -2.33
SHROOM1Q2M3G4 Y_RNA.410-201ENST00000383992 113 ntBASIC0.47□□□□□ -2.33
SHROOM1Q2M3G4 SNORA50A-201ENST00000384225 134 ntBASIC0.47□□□□□ -2.33
SHROOM1Q2M3G4 RNU6-364P-201ENST00000384387 107 ntBASIC0.47□□□□□ -2.33
SHROOM1Q2M3G4 RNU6-381P-201ENST00000391259 108 ntBASIC0.47□□□□□ -2.33
SHROOM1Q2M3G4 MIR938-201ENST00000401216 83 ntBASIC0.47□□□□□ -2.33
SHROOM1Q2M3G4 RNU2-38P-201ENST00000410856 79 ntBASIC0.47□□□□□ -2.33
SHROOM1Q2M3G4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.47□□□□□ -2.33
SHROOM1Q2M3G4 SEPT7P4-201ENST00000437076 306 ntBASIC0.47□□□□□ -2.33
SHROOM1Q2M3G4 snoU13.2-201ENST00000459201 104 ntBASIC0.47□□□□□ -2.33
SHROOM1Q2M3G4 RNU7-185P-201ENST00000459215 60 ntBASIC0.47□□□□□ -2.33
SHROOM1Q2M3G4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.47□□□□□ -2.33
SHROOM1Q2M3G4 AC011921.3-201ENST00000605540 361 ntBASIC0.47□□□□□ -2.33
SHROOM1Q2M3G4 AL596211.1-201ENST00000569873 2277 ntBASIC0.47□□□□□ -2.33
SHROOM1Q2M3G4 RNU6-653P-201ENST00000363074 106 ntBASIC0.46□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.145-201ENST00000363527 102 ntBASIC0.46□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-738P-201ENST00000384531 106 ntBASIC0.46□□□□□ -2.34
SHROOM1Q2M3G4 MIR140-201ENST00000385282 100 ntBASIC0.46□□□□□ -2.34
SHROOM1Q2M3G4 MIR1197-201ENST00000408818 88 ntBASIC0.46□□□□□ -2.34
SHROOM1Q2M3G4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.46□□□□□ -2.34
SHROOM1Q2M3G4 RNU7-102P-201ENST00000458948 62 ntBASIC0.46□□□□□ -2.34
SHROOM1Q2M3G4 AL117187.1-201ENST00000555482 181 ntBASIC0.46□□□□□ -2.34
SHROOM1Q2M3G4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.46□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.812-201ENST00000610788 101 ntBASIC0.46□□□□□ -2.34
SHROOM1Q2M3G4 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.46□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.784-201ENST00000613803 101 ntBASIC0.46□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.787-201ENST00000616522 101 ntBASIC0.46□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.780-201ENST00000617336 101 ntBASIC0.46□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.801-201ENST00000619005 101 ntBASIC0.46□□□□□ -2.34
SHROOM1Q2M3G4 U6.104-201ENST00000637979 90 ntBASIC0.46□□□□□ -2.34
SHROOM1Q2M3G4 AC090625.1-201ENST00000357130 210 ntBASIC0.45□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.47-201ENST00000362697 108 ntBASIC0.45□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.68-201ENST00000362881 102 ntBASIC0.45□□□□□ -2.34
SHROOM1Q2M3G4 SNORA63-201ENST00000363450 132 ntBASIC0.45□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.176-201ENST00000363815 109 ntBASIC0.45□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.308-201ENST00000365043 101 ntBASIC0.45□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.352-201ENST00000365439 102 ntBASIC0.45□□□□□ -2.34
SHROOM1Q2M3G4 RNU4-17P-201ENST00000365598 141 ntBASIC0.45□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-716P-201ENST00000365621 103 ntBASIC0.45□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.459-201ENST00000384251 102 ntBASIC0.45□□□□□ -2.34
SHROOM1Q2M3G4 MIR1257-201ENST00000408490 117 ntBASIC0.45□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-177P-201ENST00000411257 104 ntBASIC0.45□□□□□ -2.34
SHROOM1Q2M3G4 RNU7-156P-201ENST00000517214 74 ntBASIC0.45□□□□□ -2.34
SHROOM1Q2M3G4 MIR6717-201ENST00000622747 73 ntBASIC0.45□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-728P-201ENST00000365375 104 ntBASIC0.44□□□□□ -2.34
SHROOM1Q2M3G4 MIR125B2-201ENST00000385128 89 ntBASIC0.44□□□□□ -2.34
SHROOM1Q2M3G4 SNORA26.6-201ENST00000391256 115 ntBASIC0.44□□□□□ -2.34
SHROOM1Q2M3G4 SNORA79-201ENST00000408376 140 ntBASIC0.44□□□□□ -2.34
SHROOM1Q2M3G4 AL121914.1-201ENST00000450188 156 ntBASIC0.44□□□□□ -2.34
SHROOM1Q2M3G4 MIR18B-201ENST00000454574 71 ntBASIC0.44□□□□□ -2.34
SHROOM1Q2M3G4 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.262-201ENST00000364641 102 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 233.5 ms