Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 Y_RNA.168-201ENST00000363740 102 ntBASIC0.8□□□□□ -2.28
SIX1Q15475 SNORD114-24-201ENST00000365029 72 ntBASIC0.8□□□□□ -2.28
SIX1Q15475 RNA5SP95-201ENST00000410319 137 ntBASIC0.8□□□□□ -2.28
SIX1Q15475 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
SIX1Q15475 AP002392.1-201ENST00000537692 208 ntBASIC0.8□□□□□ -2.28
SIX1Q15475 AL020996.3-201ENST00000606617 222 ntBASIC0.8□□□□□ -2.28
SIX1Q15475 AC022709.1-201ENST00000615967 87 ntBASIC0.8□□□□□ -2.28
SIX1Q15475 AC012676.2-201ENST00000619258 186 ntBASIC0.8□□□□□ -2.28
SIX1Q15475 MIR6515-201ENST00000619843 57 ntBASIC0.8□□□□□ -2.28
SIX1Q15475 SNORA25.7-201ENST00000364375 127 ntBASIC0.79□□□□□ -2.28
SIX1Q15475 SNORD113.3-201ENST00000364630 78 ntBASIC0.79□□□□□ -2.28
SIX1Q15475 Y_RNA.351-201ENST00000365436 96 ntBASIC0.79□□□□□ -2.28
SIX1Q15475 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
SIX1Q15475 SNORD111-201ENST00000408139 94 ntBASIC0.79□□□□□ -2.28
SIX1Q15475 SEPT7P4-201ENST00000437076 306 ntBASIC0.79□□□□□ -2.28
SIX1Q15475 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.79□□□□□ -2.28
SIX1Q15475 RNU7-120P-201ENST00000459334 63 ntBASIC0.79□□□□□ -2.28
SIX1Q15475 RNU7-80P-201ENST00000459562 61 ntBASIC0.79□□□□□ -2.28
SIX1Q15475 AC107027.2-201ENST00000512197 115 ntBASIC0.79□□□□□ -2.28
SIX1Q15475 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.79□□□□□ -2.28
SIX1Q15475 MIR4264-201ENST00000583520 66 ntBASIC0.79□□□□□ -2.28
SIX1Q15475 AC013244.2-201ENST00000603396 103 ntBASIC0.79□□□□□ -2.28
SIX1Q15475 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.78□□□□□ -2.28
SIX1Q15475 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
SIX1Q15475 MIR342-201ENST00000362212 99 ntBASIC0.78□□□□□ -2.28
SIX1Q15475 Y_RNA.29-201ENST00000362570 113 ntBASIC0.78□□□□□ -2.28
SIX1Q15475 SNORA1.1-201ENST00000364671 133 ntBASIC0.78□□□□□ -2.28
SIX1Q15475 RNU6-580P-201ENST00000365159 107 ntBASIC0.78□□□□□ -2.28
SIX1Q15475 Y_RNA.393-201ENST00000383936 102 ntBASIC0.78□□□□□ -2.28
SIX1Q15475 Y_RNA.454-201ENST00000384224 113 ntBASIC0.78□□□□□ -2.28
SIX1Q15475 Y_RNA.785-201ENST00000384290 109 ntBASIC0.78□□□□□ -2.28
SIX1Q15475 Y_RNA.521-201ENST00000384560 114 ntBASIC0.78□□□□□ -2.28
SIX1Q15475 SNORA2B-201ENST00000384583 137 ntBASIC0.78□□□□□ -2.28
SIX1Q15475 RNU6-1190P-201ENST00000410811 104 ntBASIC0.78□□□□□ -2.28
SIX1Q15475 HMGN1P33-201ENST00000432945 451 ntBASIC0.78□□□□□ -2.28
SIX1Q15475 UBL5P1-201ENST00000507979 193 ntBASIC0.78□□□□□ -2.28
SIX1Q15475 AP000753.3-201ENST00000604083 169 ntBASIC0.78□□□□□ -2.28
SIX1Q15475 AC091932.4-201ENST00000623386 200 ntBASIC0.78□□□□□ -2.28
SIX1Q15475 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
SIX1Q15475 Y_RNA.240-201ENST00000364469 95 ntBASIC0.77□□□□□ -2.29
SIX1Q15475 RNU6-768P-201ENST00000384683 107 ntBASIC0.77□□□□□ -2.29
SIX1Q15475 MIR942-201ENST00000401111 86 ntBASIC0.77□□□□□ -2.29
SIX1Q15475 AC244023.1-201ENST00000426884 112 ntBASIC0.77□□□□□ -2.29
SIX1Q15475 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.77□□□□□ -2.29
SIX1Q15475 SCARNA15-202ENST00000516881 127 ntBASIC0.77□□□□□ -2.29
SIX1Q15475 SNORA81.3-201ENST00000517283 198 ntBASIC0.77□□□□□ -2.29
SIX1Q15475 CYP3A137P-201ENST00000562436 69 ntBASIC0.77□□□□□ -2.29
SIX1Q15475 AC242498.1-201ENST00000604134 111 ntBASIC0.77□□□□□ -2.29
SIX1Q15475 RNU6-94P-201ENST00000607728 107 ntBASIC0.77□□□□□ -2.29
SIX1Q15475 MIR302B-201ENST00000362188 73 ntBASIC0.76□□□□□ -2.29
SIX1Q15475 RNU6-682P-201ENST00000363843 106 ntBASIC0.76□□□□□ -2.29
SIX1Q15475 Y_RNA.337-201ENST00000365312 102 ntBASIC0.76□□□□□ -2.29
SIX1Q15475 Y_RNA.354-201ENST00000365448 111 ntBASIC0.76□□□□□ -2.29
SIX1Q15475 SNORD38B-201ENST00000384690 67 ntBASIC0.76□□□□□ -2.29
SIX1Q15475 RNU6-205P-201ENST00000390858 107 ntBASIC0.76□□□□□ -2.29
SIX1Q15475 SNORA26.6-201ENST00000391256 115 ntBASIC0.76□□□□□ -2.29
SIX1Q15475 RNU6-602P-201ENST00000411155 105 ntBASIC0.76□□□□□ -2.29
SIX1Q15475 RNU5E-9P-201ENST00000411164 104 ntBASIC0.76□□□□□ -2.29
SIX1Q15475 FABP5P4-201ENST00000437203 171 ntBASIC0.76□□□□□ -2.29
SIX1Q15475 PDCD5P2-201ENST00000507570 312 ntBASIC0.76□□□□□ -2.29
SIX1Q15475 RNU6-1149P-201ENST00000516810 97 ntBASIC0.76□□□□□ -2.29
SIX1Q15475 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.76□□□□□ -2.29
SIX1Q15475 MIR5000-201ENST00000577717 103 ntBASIC0.76□□□□□ -2.29
SIX1Q15475 SNORD38B-202ENST00000625943 69 ntBASIC0.76□□□□□ -2.29
SIX1Q15475 RNU4-84P-201ENST00000364200 139 ntBASIC0.75□□□□□ -2.29
SIX1Q15475 Y_RNA.357-201ENST00000365487 109 ntBASIC0.75□□□□□ -2.29
SIX1Q15475 RNU6-1336P-201ENST00000383886 109 ntBASIC0.75□□□□□ -2.29
SIX1Q15475 RNU6-239P-201ENST00000390990 99 ntBASIC0.75□□□□□ -2.29
SIX1Q15475 RNU6-861P-201ENST00000516745 106 ntBASIC0.75□□□□□ -2.29
SIX1Q15475 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.75□□□□□ -2.29
SIX1Q15475 MIR4661-201ENST00000582720 75 ntBASIC0.75□□□□□ -2.29
SIX1Q15475 MIR6717-201ENST00000622747 73 ntBASIC0.75□□□□□ -2.29
SIX1Q15475 AL596211.1-201ENST00000569873 2277 ntBASIC0.75□□□□□ -2.29
SIX1Q15475 RNU1-133P-201ENST00000364867 167 ntBASIC0.74□□□□□ -2.29
SIX1Q15475 MIR613-201ENST00000385248 95 ntBASIC0.74□□□□□ -2.29
SIX1Q15475 RNU6-994P-201ENST00000410507 111 ntBASIC0.74□□□□□ -2.29
SIX1Q15475 RNA5SP261-201ENST00000410536 106 ntBASIC0.74□□□□□ -2.29
SIX1Q15475 AC004941.2-201ENST00000427009 228 ntBASIC0.74□□□□□ -2.29
SIX1Q15475 RNU7-45P-201ENST00000459460 63 ntBASIC0.74□□□□□ -2.29
SIX1Q15475 RNA5SP255-201ENST00000516370 107 ntBASIC0.74□□□□□ -2.29
SIX1Q15475 RNU7-121P-201ENST00000516604 62 ntBASIC0.74□□□□□ -2.29
SIX1Q15475 RNU7-70P-201ENST00000516941 66 ntBASIC0.74□□□□□ -2.29
SIX1Q15475 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.74□□□□□ -2.29
SIX1Q15475 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.74□□□□□ -2.29
SIX1Q15475 AC004792.1-201ENST00000614523 137 ntBASIC0.74□□□□□ -2.29
SIX1Q15475 MTND5P32-201ENST00000560711 1802 ntBASIC0.73□□□□□ -2.29
SIX1Q15475 Y_RNA.52-201ENST00000362760 96 ntBASIC0.73□□□□□ -2.29
SIX1Q15475 RNU6-1082P-201ENST00000364574 107 ntBASIC0.73□□□□□ -2.29
SIX1Q15475 Y_RNA.441-201ENST00000384123 112 ntBASIC0.73□□□□□ -2.29
SIX1Q15475 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
SIX1Q15475 RNU6-1319P-201ENST00000390855 104 ntBASIC0.73□□□□□ -2.29
SIX1Q15475 RNU6-747P-201ENST00000390928 104 ntBASIC0.73□□□□□ -2.29
SIX1Q15475 RNU6-241P-201ENST00000391148 104 ntBASIC0.73□□□□□ -2.29
SIX1Q15475 SNORA75.5-201ENST00000391291 81 ntBASIC0.73□□□□□ -2.29
SIX1Q15475 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.73□□□□□ -2.29
SIX1Q15475 RNU6-177P-201ENST00000411257 104 ntBASIC0.73□□□□□ -2.29
SIX1Q15475 RPS3AP1-201ENST00000413190 320 ntBASIC0.73□□□□□ -2.29
SIX1Q15475 POLR2J4-204ENST00000418424 324 ntBASIC0.73□□□□□ -2.29
SIX1Q15475 AC067940.1-201ENST00000458411 300 ntBASIC0.73□□□□□ -2.29
SIX1Q15475 RNU7-62P-201ENST00000458856 62 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms