Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 MIR4431-201ENST00000579990 94 ntBASIC0.78□□□□□ -2.28
PTCH1Q13635 AC023932.2-201ENST00000603176 175 ntBASIC0.78□□□□□ -2.28
PTCH1Q13635 MIR6759-201ENST00000638110 65 ntBASIC0.78□□□□□ -2.28
PTCH1Q13635 Y_RNA.23-201ENST00000362496 106 ntBASIC0.77□□□□□ -2.29
PTCH1Q13635 RNU6-888P-201ENST00000363010 101 ntBASIC0.77□□□□□ -2.29
PTCH1Q13635 RNU6-682P-201ENST00000363843 106 ntBASIC0.77□□□□□ -2.29
PTCH1Q13635 MIR548A2-201ENST00000384956 97 ntBASIC0.77□□□□□ -2.29
PTCH1Q13635 U8.17-201ENST00000391292 132 ntBASIC0.77□□□□□ -2.29
PTCH1Q13635 SNORA79-201ENST00000408376 140 ntBASIC0.77□□□□□ -2.29
PTCH1Q13635 MIR548O-201ENST00000408583 114 ntBASIC0.77□□□□□ -2.29
PTCH1Q13635 SNORD123-201ENST00000459473 70 ntBASIC0.77□□□□□ -2.29
PTCH1Q13635 RPS26P48-201ENST00000491713 339 ntBASIC0.77□□□□□ -2.29
PTCH1Q13635 RNU7-25P-201ENST00000516544 62 ntBASIC0.77□□□□□ -2.29
PTCH1Q13635 MIR548AR-201ENST00000582191 57 ntBASIC0.77□□□□□ -2.29
PTCH1Q13635 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
PTCH1Q13635 PRELID3BP2-201ENST00000605362 201 ntBASIC0.77□□□□□ -2.29
PTCH1Q13635 MIR5087-201ENST00000635826 76 ntBASIC0.77□□□□□ -2.29
PTCH1Q13635 SNORD115-28-201ENST00000363931 81 ntBASIC0.76□□□□□ -2.29
PTCH1Q13635 Y_RNA.240-201ENST00000364469 95 ntBASIC0.76□□□□□ -2.29
PTCH1Q13635 RNY4P3-201ENST00000365254 95 ntBASIC0.76□□□□□ -2.29
PTCH1Q13635 MIR518F-201ENST00000384973 87 ntBASIC0.76□□□□□ -2.29
PTCH1Q13635 RNU6-861P-201ENST00000516745 106 ntBASIC0.76□□□□□ -2.29
PTCH1Q13635 SNORA18.7-201ENST00000516910 131 ntBASIC0.76□□□□□ -2.29
PTCH1Q13635 MIR378D2-201ENST00000580636 98 ntBASIC0.76□□□□□ -2.29
PTCH1Q13635 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
PTCH1Q13635 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
PTCH1Q13635 Y_RNA.37-201ENST00000362606 108 ntBASIC0.75□□□□□ -2.29
PTCH1Q13635 RNU6-643P-201ENST00000384018 107 ntBASIC0.75□□□□□ -2.29
PTCH1Q13635 RNU6-907P-201ENST00000390924 102 ntBASIC0.75□□□□□ -2.29
PTCH1Q13635 RNA5SP63-201ENST00000391225 112 ntBASIC0.75□□□□□ -2.29
PTCH1Q13635 RNU6-938P-201ENST00000411285 103 ntBASIC0.75□□□□□ -2.29
PTCH1Q13635 AF228730.3-201ENST00000436691 102 ntBASIC0.75□□□□□ -2.29
PTCH1Q13635 FABP5P4-201ENST00000437203 171 ntBASIC0.75□□□□□ -2.29
PTCH1Q13635 AC087499.4-201ENST00000448505 178 ntBASIC0.75□□□□□ -2.29
PTCH1Q13635 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.75□□□□□ -2.29
PTCH1Q13635 Y_RNA.662-201ENST00000516028 97 ntBASIC0.75□□□□□ -2.29
PTCH1Q13635 SNORD116-25-201ENST00000516517 92 ntBASIC0.75□□□□□ -2.29
PTCH1Q13635 AC134878.1-201ENST00000619901 243 ntBASIC0.75□□□□□ -2.29
PTCH1Q13635 AC015726.2-201ENST00000620112 122 ntBASIC0.75□□□□□ -2.29
PTCH1Q13635 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.75□□□□□ -2.29
PTCH1Q13635 RNU6-978P-201ENST00000364371 103 ntBASIC0.74□□□□□ -2.29
PTCH1Q13635 Y_RNA.370-201ENST00000365589 108 ntBASIC0.74□□□□□ -2.29
PTCH1Q13635 Y_RNA.410-201ENST00000383992 113 ntBASIC0.74□□□□□ -2.29
PTCH1Q13635 SNORA1-201ENST00000384107 130 ntBASIC0.74□□□□□ -2.29
PTCH1Q13635 Y_RNA.441-201ENST00000384123 112 ntBASIC0.74□□□□□ -2.29
PTCH1Q13635 MIR520C-201ENST00000385005 87 ntBASIC0.74□□□□□ -2.29
PTCH1Q13635 MIR329-2-201ENST00000385029 84 ntBASIC0.74□□□□□ -2.29
PTCH1Q13635 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
PTCH1Q13635 RNA5SP25-201ENST00000410815 110 ntBASIC0.74□□□□□ -2.29
PTCH1Q13635 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.74□□□□□ -2.29
PTCH1Q13635 SEPT7P4-201ENST00000437076 306 ntBASIC0.74□□□□□ -2.29
PTCH1Q13635 RNU2-13P-201ENST00000515909 113 ntBASIC0.74□□□□□ -2.29
PTCH1Q13635 RNU7-43P-201ENST00000516554 64 ntBASIC0.74□□□□□ -2.29
PTCH1Q13635 RNU6-1270P-201ENST00000517128 108 ntBASIC0.74□□□□□ -2.29
PTCH1Q13635 RNU7-181P-201ENST00000517234 74 ntBASIC0.74□□□□□ -2.29
PTCH1Q13635 MIR4764-201ENST00000580680 88 ntBASIC0.74□□□□□ -2.29
PTCH1Q13635 FTX_2.1-201ENST00000618816 94 ntBASIC0.74□□□□□ -2.29
PTCH1Q13635 SNORA1.2-201ENST00000365189 134 ntBASIC0.73□□□□□ -2.29
PTCH1Q13635 RNU6-1292P-201ENST00000383856 107 ntBASIC0.73□□□□□ -2.29
PTCH1Q13635 Y_RNA.494-201ENST00000384432 111 ntBASIC0.73□□□□□ -2.29
PTCH1Q13635 Y_RNA.542-201ENST00000384641 111 ntBASIC0.73□□□□□ -2.29
PTCH1Q13635 RNU6-1067P-201ENST00000384752 107 ntBASIC0.73□□□□□ -2.29
PTCH1Q13635 SNORD28B-201ENST00000390993 75 ntBASIC0.73□□□□□ -2.29
PTCH1Q13635 SNORA40.5-201ENST00000391061 128 ntBASIC0.73□□□□□ -2.29
PTCH1Q13635 SNORD77.3-201ENST00000391113 65 ntBASIC0.73□□□□□ -2.29
PTCH1Q13635 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
PTCH1Q13635 RNA5SP255-201ENST00000516370 107 ntBASIC0.73□□□□□ -2.29
PTCH1Q13635 SNORD111.1-201ENST00000516421 86 ntBASIC0.73□□□□□ -2.29
PTCH1Q13635 RNU7-121P-201ENST00000516604 62 ntBASIC0.73□□□□□ -2.29
PTCH1Q13635 SNORA62.5-201ENST00000516634 120 ntBASIC0.73□□□□□ -2.29
PTCH1Q13635 MIR3668-201ENST00000582138 75 ntBASIC0.73□□□□□ -2.29
PTCH1Q13635 MIR3192-201ENST00000584920 77 ntBASIC0.73□□□□□ -2.29
PTCH1Q13635 AL365205.2-201ENST00000594586 68 ntBASIC0.73□□□□□ -2.29
PTCH1Q13635 AL096861.1-201ENST00000610899 123 ntBASIC0.73□□□□□ -2.29
PTCH1Q13635 AC067863.3-201ENST00000624172 122 ntBASIC0.73□□□□□ -2.29
PTCH1Q13635 RNU4-84P-201ENST00000364200 139 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 Y_RNA.337-201ENST00000365312 102 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 Y_RNA.357-201ENST00000365487 109 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 RNU6-597P-201ENST00000365620 102 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 RNU6-886P-201ENST00000384319 105 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 Y_RNA.537-201ENST00000384626 109 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 RNU6-239P-201ENST00000390990 99 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 RNU6-1135P-201ENST00000411083 103 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 RNU5E-9P-201ENST00000411164 104 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 AC006461.1-201ENST00000412637 326 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 snoU13.25-201ENST00000458945 104 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 AC107297.1-201ENST00000459991 176 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 AC074198.2-201ENST00000508153 258 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 MIR3129-201ENST00000581095 76 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 AC098479.1-201ENST00000609225 154 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-34-201ENST00000362441 82 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-12-201ENST00000362583 82 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-29-201ENST00000362834 82 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-9-201ENST00000362912 82 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-21-201ENST00000362963 81 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-14-201ENST00000363090 81 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-13-201ENST00000363358 82 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-41-201ENST00000363608 82 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-11-201ENST00000363616 82 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-5-201ENST00000363633 82 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 370.7 ms