Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 Y_RNA.787-201ENST00000616522 101 ntBASIC0.53□□□□□ -2.32
GABPAQ06546 Y_RNA.780-201ENST00000617336 101 ntBASIC0.53□□□□□ -2.32
GABPAQ06546 Y_RNA.801-201ENST00000619005 101 ntBASIC0.53□□□□□ -2.32
GABPAQ06546 RNU6-728P-201ENST00000365375 104 ntBASIC0.52□□□□□ -2.33
GABPAQ06546 Y_RNA.396-201ENST00000383949 103 ntBASIC0.52□□□□□ -2.33
GABPAQ06546 MIR573-201ENST00000384964 99 ntBASIC0.52□□□□□ -2.33
GABPAQ06546 SNORD12C-201ENST00000386307 89 ntBASIC0.52□□□□□ -2.33
GABPAQ06546 RNU6-381P-201ENST00000391259 108 ntBASIC0.52□□□□□ -2.33
GABPAQ06546 MIR938-201ENST00000401216 83 ntBASIC0.52□□□□□ -2.33
GABPAQ06546 RNU6-1165P-201ENST00000410119 107 ntBASIC0.52□□□□□ -2.33
GABPAQ06546 MIR18B-201ENST00000454574 71 ntBASIC0.52□□□□□ -2.33
GABPAQ06546 MIR3129-201ENST00000581095 76 ntBASIC0.52□□□□□ -2.33
GABPAQ06546 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
GABPAQ06546 Y_RNA.47-201ENST00000362697 108 ntBASIC0.51□□□□□ -2.33
GABPAQ06546 RNU6-653P-201ENST00000363074 106 ntBASIC0.51□□□□□ -2.33
GABPAQ06546 Y_RNA.145-201ENST00000363527 102 ntBASIC0.51□□□□□ -2.33
GABPAQ06546 SNORD114-23-201ENST00000363536 72 ntBASIC0.51□□□□□ -2.33
GABPAQ06546 Y_RNA.262-201ENST00000364641 102 ntBASIC0.51□□□□□ -2.33
GABPAQ06546 Y_RNA.352-201ENST00000365439 102 ntBASIC0.51□□□□□ -2.33
GABPAQ06546 Y_RNA.459-201ENST00000384251 102 ntBASIC0.51□□□□□ -2.33
GABPAQ06546 RNU6-472P-201ENST00000384299 107 ntBASIC0.51□□□□□ -2.33
GABPAQ06546 MIR548F4-201ENST00000408515 105 ntBASIC0.51□□□□□ -2.33
GABPAQ06546 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.51□□□□□ -2.33
GABPAQ06546 RNU7-56P-201ENST00000458744 62 ntBASIC0.51□□□□□ -2.33
GABPAQ06546 snoU13.2-201ENST00000459201 104 ntBASIC0.51□□□□□ -2.33
GABPAQ06546 AC018659.1-201ENST00000551083 169 ntBASIC0.51□□□□□ -2.33
GABPAQ06546 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.51□□□□□ -2.33
GABPAQ06546 AC097639.2-201ENST00000603159 172 ntBASIC0.51□□□□□ -2.33
GABPAQ06546 RNU4-17P-201ENST00000365598 141 ntBASIC0.5□□□□□ -2.33
GABPAQ06546 RNU6-945P-201ENST00000383947 107 ntBASIC0.5□□□□□ -2.33
GABPAQ06546 RNY1P8-201ENST00000383970 114 ntBASIC0.5□□□□□ -2.33
GABPAQ06546 RNU6-364P-201ENST00000384387 107 ntBASIC0.5□□□□□ -2.33
GABPAQ06546 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
GABPAQ06546 Y_RNA.618-201ENST00000410949 107 ntBASIC0.5□□□□□ -2.33
GABPAQ06546 RNU7-45P-201ENST00000459460 63 ntBASIC0.5□□□□□ -2.33
GABPAQ06546 AL117187.1-201ENST00000555482 181 ntBASIC0.5□□□□□ -2.33
GABPAQ06546 MIR3612-201ENST00000579753 87 ntBASIC0.5□□□□□ -2.33
GABPAQ06546 AL162730.1-201ENST00000605734 292 ntBASIC0.5□□□□□ -2.33
GABPAQ06546 MIR6717-201ENST00000622747 73 ntBASIC0.5□□□□□ -2.33
GABPAQ06546 Y_RNA.76-201ENST00000362931 109 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 SNORD18A-201ENST00000363753 72 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 Y_RNA.292-201ENST00000364904 97 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
GABPAQ06546 RNU6-1319P-201ENST00000390855 104 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 RNU6-747P-201ENST00000390928 104 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 RNU6-241P-201ENST00000391148 104 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 RNU6-447P-201ENST00000410293 104 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 RNU6-1118P-201ENST00000410382 104 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 RNU6-1076P-201ENST00000410397 104 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 RNU6-355P-201ENST00000410427 104 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 RNU6-791P-201ENST00000410467 104 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 RNU6-705P-201ENST00000410601 104 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 RNU6-1100P-201ENST00000410691 104 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 RNU6-860P-201ENST00000410860 104 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 RNU6-177P-201ENST00000411257 104 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 RNU6-1217P-201ENST00000411276 104 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 RNU6-785P-201ENST00000411324 104 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 AL121914.1-201ENST00000450188 156 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 RNU7-185P-201ENST00000459215 60 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 RNU7-80P-201ENST00000459562 61 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 AL442067.1-201ENST00000613261 223 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 U6.90-201ENST00000614007 104 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 U6.70-201ENST00000620287 104 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 AC010487.4-201ENST00000637027 61 ntBASIC0.49□□□□□ -2.33
GABPAQ06546 Y_RNA.149-201ENST00000363558 117 ntBASIC0.48□□□□□ -2.33
GABPAQ06546 RNU6-1237P-201ENST00000384777 107 ntBASIC0.48□□□□□ -2.33
GABPAQ06546 MIR1257-201ENST00000408490 117 ntBASIC0.48□□□□□ -2.33
GABPAQ06546 RNU2-38P-201ENST00000410856 79 ntBASIC0.48□□□□□ -2.33
GABPAQ06546 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.48□□□□□ -2.33
GABPAQ06546 RNY3P16-201ENST00000516338 101 ntBASIC0.48□□□□□ -2.33
GABPAQ06546 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.48□□□□□ -2.33
GABPAQ06546 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.48□□□□□ -2.33
GABPAQ06546 AC243829.6-201ENST00000612652 106 ntBASIC0.48□□□□□ -2.33
GABPAQ06546 MIR376A2-201ENST00000636782 80 ntBASIC0.48□□□□□ -2.33
GABPAQ06546 AL596211.1-201ENST00000569873 2277 ntBASIC0.48□□□□□ -2.33
GABPAQ06546 MIR18A-201ENST00000362310 71 ntBASIC0.47□□□□□ -2.33
GABPAQ06546 RNU6-103P-201ENST00000363686 107 ntBASIC0.47□□□□□ -2.33
GABPAQ06546 Y_RNA.205-201ENST00000364128 113 ntBASIC0.47□□□□□ -2.33
GABPAQ06546 VTRNA1-3-201ENST00000365645 89 ntBASIC0.47□□□□□ -2.33
GABPAQ06546 Y_RNA.542-201ENST00000384641 111 ntBASIC0.47□□□□□ -2.33
GABPAQ06546 RNU6-1011P-201ENST00000384668 107 ntBASIC0.47□□□□□ -2.33
GABPAQ06546 MIR125B2-201ENST00000385128 89 ntBASIC0.47□□□□□ -2.33
GABPAQ06546 MIR140-201ENST00000385282 100 ntBASIC0.47□□□□□ -2.33
GABPAQ06546 RNA5SP261-201ENST00000410536 106 ntBASIC0.47□□□□□ -2.33
GABPAQ06546 SEPT7P4-201ENST00000437076 306 ntBASIC0.47□□□□□ -2.33
GABPAQ06546 RNU7-156P-201ENST00000517214 74 ntBASIC0.47□□□□□ -2.33
GABPAQ06546 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.47□□□□□ -2.33
GABPAQ06546 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
GABPAQ06546 Y_RNA.288-201ENST00000364854 92 ntBASIC0.46□□□□□ -2.34
GABPAQ06546 Y_RNA.308-201ENST00000365043 101 ntBASIC0.46□□□□□ -2.34
GABPAQ06546 Y_RNA.454-201ENST00000384224 113 ntBASIC0.46□□□□□ -2.34
GABPAQ06546 RNU6-738P-201ENST00000384531 106 ntBASIC0.46□□□□□ -2.34
GABPAQ06546 Y_RNA.518-201ENST00000384552 113 ntBASIC0.46□□□□□ -2.34
GABPAQ06546 RNU6-679P-201ENST00000391003 106 ntBASIC0.46□□□□□ -2.34
GABPAQ06546 SNORA26.6-201ENST00000391256 115 ntBASIC0.46□□□□□ -2.34
GABPAQ06546 SNORD127-201ENST00000458892 86 ntBASIC0.46□□□□□ -2.34
GABPAQ06546 RNU7-102P-201ENST00000458948 62 ntBASIC0.46□□□□□ -2.34
GABPAQ06546 MIR3152-201ENST00000579801 74 ntBASIC0.46□□□□□ -2.34
GABPAQ06546 MIR4744-201ENST00000581563 82 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms