Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 TRBVB-201ENST00000477100 408 ntBASIC0.08□□□□□ -2.4
IRX3P78415 RNU6-507P-201ENST00000516045 100 ntBASIC0.08□□□□□ -2.4
IRX3P78415 RNA5SP395-201ENST00000516567 118 ntBASIC0.08□□□□□ -2.4
IRX3P78415 uc_338.6-201ENST00000613544 171 ntBASIC0.08□□□□□ -2.4
IRX3P78415 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
IRX3P78415 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
IRX3P78415 Y_RNA.229-201ENST00000364347 113 ntBASIC0.07□□□□□ -2.4
IRX3P78415 RNU6-815P-201ENST00000384080 113 ntBASIC0.07□□□□□ -2.4
IRX3P78415 RNU6-1228P-201ENST00000391014 107 ntBASIC0.07□□□□□ -2.4
IRX3P78415 SNORD93-201ENST00000408813 74 ntBASIC0.07□□□□□ -2.4
IRX3P78415 RNA5SP237-201ENST00000410414 113 ntBASIC0.07□□□□□ -2.4
IRX3P78415 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.07□□□□□ -2.4
IRX3P78415 AL512326.2-201ENST00000426359 151 ntBASIC0.07□□□□□ -2.4
IRX3P78415 AF228730.3-201ENST00000436691 102 ntBASIC0.07□□□□□ -2.4
IRX3P78415 RNU6-765P-201ENST00000516916 99 ntBASIC0.07□□□□□ -2.4
IRX3P78415 RNU6-1270P-201ENST00000517128 108 ntBASIC0.07□□□□□ -2.4
IRX3P78415 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
IRX3P78415 Y_RNA.128-201ENST00000363391 112 ntBASIC0.06□□□□□ -2.4
IRX3P78415 Y_RNA.394-201ENST00000383942 103 ntBASIC0.06□□□□□ -2.4
IRX3P78415 RNU6-662P-201ENST00000384253 104 ntBASIC0.06□□□□□ -2.4
IRX3P78415 Y_RNA.541-201ENST00000384640 113 ntBASIC0.06□□□□□ -2.4
IRX3P78415 Y_RNA.567-201ENST00000384736 106 ntBASIC0.06□□□□□ -2.4
IRX3P78415 MIR329-2-201ENST00000385029 84 ntBASIC0.06□□□□□ -2.4
IRX3P78415 AC113618.1-201ENST00000416747 285 ntBASIC0.06□□□□□ -2.4
IRX3P78415 SERF1AP1-201ENST00000514575 187 ntBASIC0.06□□□□□ -2.4
IRX3P78415 AL008718.3-201ENST00000610217 321 ntBASIC0.06□□□□□ -2.4
IRX3P78415 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.06□□□□□ -2.4
IRX3P78415 MIR371B-201ENST00000638082 66 ntBASIC0.06□□□□□ -2.4
IRX3P78415 Y_RNA.7-201ENST00000362352 102 ntBASIC0.05□□□□□ -2.4
IRX3P78415 Y_RNA.24-201ENST00000362508 103 ntBASIC0.05□□□□□ -2.4
IRX3P78415 Y_RNA.42-201ENST00000362660 108 ntBASIC0.05□□□□□ -2.4
IRX3P78415 snoU2_19.2-201ENST00000363024 80 ntBASIC0.05□□□□□ -2.4
IRX3P78415 Y_RNA.158-201ENST00000363651 101 ntBASIC0.05□□□□□ -2.4
IRX3P78415 Y_RNA.351-201ENST00000365436 96 ntBASIC0.05□□□□□ -2.4
IRX3P78415 RNU6-1292P-201ENST00000383856 107 ntBASIC0.05□□□□□ -2.4
IRX3P78415 RNU6-484P-201ENST00000384016 107 ntBASIC0.05□□□□□ -2.4
IRX3P78415 RNU6-211P-201ENST00000384047 107 ntBASIC0.05□□□□□ -2.4
IRX3P78415 SNORD12C-201ENST00000386307 89 ntBASIC0.05□□□□□ -2.4
IRX3P78415 SNORA26.6-201ENST00000391256 115 ntBASIC0.05□□□□□ -2.4
IRX3P78415 RNU4-83P-201ENST00000410863 133 ntBASIC0.05□□□□□ -2.4
IRX3P78415 Y_RNA.618-201ENST00000410949 107 ntBASIC0.05□□□□□ -2.4
IRX3P78415 AC073261.1-201ENST00000429409 121 ntBASIC0.05□□□□□ -2.4
IRX3P78415 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.05□□□□□ -2.4
IRX3P78415 MIR369-201ENST00000362155 70 ntBASIC0.04□□□□□ -2.4
IRX3P78415 Y_RNA.19-201ENST00000362462 99 ntBASIC0.04□□□□□ -2.4
IRX3P78415 Y_RNA.214-201ENST00000364201 112 ntBASIC0.04□□□□□ -2.4
IRX3P78415 SNORA20-201ENST00000384662 132 ntBASIC0.04□□□□□ -2.4
IRX3P78415 MIR616-201ENST00000385293 97 ntBASIC0.04□□□□□ -2.4
IRX3P78415 SNORA79-201ENST00000408376 140 ntBASIC0.04□□□□□ -2.4
IRX3P78415 RNU6-121P-201ENST00000410525 99 ntBASIC0.04□□□□□ -2.4
IRX3P78415 Y_RNA.660-201ENST00000516002 120 ntBASIC0.04□□□□□ -2.4
IRX3P78415 RNA5SP227-201ENST00000516184 113 ntBASIC0.04□□□□□ -2.4
IRX3P78415 RNY3P15-201ENST00000516297 97 ntBASIC0.04□□□□□ -2.4
IRX3P78415 SNORA25.18-201ENST00000607153 114 ntBASIC0.04□□□□□ -2.4
IRX3P78415 AL662814.1-201ENST00000617364 121 ntBASIC0.04□□□□□ -2.4
IRX3P78415 MIR6759-201ENST00000638110 65 ntBASIC0.04□□□□□ -2.4
IRX3P78415 MIR411-201ENST00000362239 96 ntBASIC0.03□□□□□ -2.4
IRX3P78415 SNORA9.1-201ENST00000362412 131 ntBASIC0.03□□□□□ -2.4
IRX3P78415 SNORD114-5-201ENST00000362928 70 ntBASIC0.03□□□□□ -2.4
IRX3P78415 Y_RNA.275-201ENST00000364726 110 ntBASIC0.03□□□□□ -2.4
IRX3P78415 Y_RNA.455-201ENST00000384230 98 ntBASIC0.03□□□□□ -2.4
IRX3P78415 RNU6-35P-201ENST00000384530 107 ntBASIC0.03□□□□□ -2.4
IRX3P78415 Y_RNA.515-201ENST00000384535 112 ntBASIC0.03□□□□□ -2.4
IRX3P78415 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
IRX3P78415 MIR4305-201ENST00000583252 102 ntBASIC0.03□□□□□ -2.4
IRX3P78415 Y_RNA.804-201ENST00000615262 101 ntBASIC0.03□□□□□ -2.4
IRX3P78415 MIR8066-201ENST00000617280 78 ntBASIC0.03□□□□□ -2.4
IRX3P78415 MIR6828-201ENST00000636181 60 ntBASIC0.03□□□□□ -2.4
IRX3P78415 RNU6-740P-201ENST00000364734 105 ntBASIC0.02□□□□□ -2.41
IRX3P78415 Y_RNA.460-201ENST00000384255 102 ntBASIC0.02□□□□□ -2.41
IRX3P78415 ELOCP20-201ENST00000422460 345 ntBASIC0.02□□□□□ -2.41
IRX3P78415 AL138752.1-201ENST00000452964 351 ntBASIC0.02□□□□□ -2.41
IRX3P78415 AC141557.1-201ENST00000540982 400 ntBASIC0.02□□□□□ -2.41
IRX3P78415 AC133485.4-201ENST00000561835 220 ntBASIC0.02□□□□□ -2.41
IRX3P78415 MIR4743-201ENST00000584576 69 ntBASIC0.02□□□□□ -2.41
IRX3P78415 AC134503.1-201ENST00000633048 54 ntBASIC0.02□□□□□ -2.41
IRX3P78415 Y_RNA.105-201ENST00000363182 111 ntBASIC0.01□□□□□ -2.41
IRX3P78415 RNU6-1229P-201ENST00000364295 107 ntBASIC0.01□□□□□ -2.41
IRX3P78415 RNU6-450P-201ENST00000364654 107 ntBASIC0.01□□□□□ -2.41
IRX3P78415 RNY3P14-201ENST00000384309 102 ntBASIC0.01□□□□□ -2.41
IRX3P78415 RNU6-1289P-201ENST00000384431 106 ntBASIC0.01□□□□□ -2.41
IRX3P78415 RNU5E-9P-201ENST00000411164 104 ntBASIC0.01□□□□□ -2.41
IRX3P78415 SNRPGP8-201ENST00000454064 226 ntBASIC0.01□□□□□ -2.41
IRX3P78415 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
IRX3P78415 MIR5197-201ENST00000583721 112 ntBASIC0.01□□□□□ -2.41
IRX3P78415 MIR6082-201ENST00000613604 109 ntBASIC0.01□□□□□ -2.41
IRX3P78415 AC091304.10-201ENST00000641554 121 ntBASIC0.01□□□□□ -2.41
IRX3P78415 Y_RNA.31-201ENST00000362574 102 ntBASIC0□□□□□ -2.41
IRX3P78415 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
IRX3P78415 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0□□□□□ -2.41
IRX3P78415 RNU6-1194P-201ENST00000516208 104 ntBASIC0□□□□□ -2.41
IRX3P78415 RNU6-1232P-201ENST00000516299 86 ntBASIC0□□□□□ -2.41
IRX3P78415 RNU6-1338P-201ENST00000516328 91 ntBASIC0□□□□□ -2.41
IRX3P78415 RNU7-70P-201ENST00000516941 66 ntBASIC0□□□□□ -2.41
IRX3P78415 SCARNA16.5-201ENST00000517114 183 ntBASIC0□□□□□ -2.41
IRX3P78415 AL160413.1-201ENST00000622780 310 ntBASIC0□□□□□ -2.41
IRX3P78415 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.01□□□□□ -2.41
IRX3P78415 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.01□□□□□ -2.41
IRX3P78415 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.01□□□□□ -2.41
IRX3P78415 SNORD114-9-201ENST00000364370 72 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 206.9 ms