Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AP002392.1-201ENST00000537692 208 ntBASIC0.91□□□□□ -2.26
IRX4P78413 AC023827.1-201ENST00000569247 97 ntBASIC0.91□□□□□ -2.26
IRX4P78413 MIR4714-201ENST00000580728 77 ntBASIC0.91□□□□□ -2.26
IRX4P78413 MIR5197-201ENST00000583721 112 ntBASIC0.91□□□□□ -2.26
IRX4P78413 MIR6516-201ENST00000630554 81 ntBASIC0.91□□□□□ -2.26
IRX4P78413 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.9□□□□□ -2.27
IRX4P78413 MIR342-201ENST00000362212 99 ntBASIC0.9□□□□□ -2.27
IRX4P78413 Y_RNA.257-201ENST00000364596 102 ntBASIC0.9□□□□□ -2.27
IRX4P78413 RNA5SP95-201ENST00000410319 137 ntBASIC0.9□□□□□ -2.27
IRX4P78413 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
IRX4P78413 RNU7-53P-201ENST00000516705 60 ntBASIC0.9□□□□□ -2.27
IRX4P78413 MIR4661-201ENST00000582720 75 ntBASIC0.9□□□□□ -2.27
IRX4P78413 AC013244.2-201ENST00000603396 103 ntBASIC0.9□□□□□ -2.27
IRX4P78413 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.9□□□□□ -2.27
IRX4P78413 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
IRX4P78413 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
IRX4P78413 RNU6-913P-201ENST00000390913 95 ntBASIC0.89□□□□□ -2.27
IRX4P78413 AL035398.1-201ENST00000430869 322 ntBASIC0.89□□□□□ -2.27
IRX4P78413 SEPT7P4-201ENST00000437076 306 ntBASIC0.89□□□□□ -2.27
IRX4P78413 RNU7-96P-201ENST00000459535 64 ntBASIC0.89□□□□□ -2.27
IRX4P78413 RNU6-998P-201ENST00000515894 101 ntBASIC0.89□□□□□ -2.27
IRX4P78413 MIR2115-201ENST00000516657 100 ntBASIC0.89□□□□□ -2.27
IRX4P78413 RNU11-2P-201ENST00000516898 142 ntBASIC0.89□□□□□ -2.27
IRX4P78413 MIR4431-201ENST00000579990 94 ntBASIC0.89□□□□□ -2.27
IRX4P78413 RNU6-396P-201ENST00000365369 105 ntBASIC0.88□□□□□ -2.27
IRX4P78413 Y_RNA.521-201ENST00000384560 114 ntBASIC0.88□□□□□ -2.27
IRX4P78413 MIR193B-201ENST00000384907 83 ntBASIC0.88□□□□□ -2.27
IRX4P78413 MIR942-201ENST00000401111 86 ntBASIC0.88□□□□□ -2.27
IRX4P78413 MIR548I3-201ENST00000408378 149 ntBASIC0.88□□□□□ -2.27
IRX4P78413 RNU6-613P-201ENST00000410412 108 ntBASIC0.88□□□□□ -2.27
IRX4P78413 RNU7-73P-201ENST00000458743 63 ntBASIC0.88□□□□□ -2.27
IRX4P78413 RNU2-11P-201ENST00000459191 187 ntBASIC0.88□□□□□ -2.27
IRX4P78413 PDCD5P2-201ENST00000507570 312 ntBASIC0.88□□□□□ -2.27
IRX4P78413 AC107027.2-201ENST00000512197 115 ntBASIC0.88□□□□□ -2.27
IRX4P78413 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.88□□□□□ -2.27
IRX4P78413 AC072026.1-201ENST00000605023 201 ntBASIC0.88□□□□□ -2.27
IRX4P78413 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
IRX4P78413 RNU6-1292P-201ENST00000383856 107 ntBASIC0.87□□□□□ -2.27
IRX4P78413 SNORA2B-201ENST00000384583 137 ntBASIC0.87□□□□□ -2.27
IRX4P78413 MIR200A-201ENST00000384875 90 ntBASIC0.87□□□□□ -2.27
IRX4P78413 RNA5SP127-201ENST00000411051 133 ntBASIC0.87□□□□□ -2.27
IRX4P78413 AC090844.1-201ENST00000422019 156 ntBASIC0.87□□□□□ -2.27
IRX4P78413 HMGN1P33-201ENST00000432945 451 ntBASIC0.87□□□□□ -2.27
IRX4P78413 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.87□□□□□ -2.27
IRX4P78413 MIR1273G-201ENST00000577677 100 ntBASIC0.87□□□□□ -2.27
IRX4P78413 AC131055.1-201ENST00000584626 316 ntBASIC0.87□□□□□ -2.27
IRX4P78413 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
IRX4P78413 SNORA25.7-201ENST00000364375 127 ntBASIC0.86□□□□□ -2.27
IRX4P78413 RNU6-312P-201ENST00000364629 107 ntBASIC0.86□□□□□ -2.27
IRX4P78413 RNU1-36P-201ENST00000365130 165 ntBASIC0.86□□□□□ -2.27
IRX4P78413 Y_RNA.351-201ENST00000365436 96 ntBASIC0.86□□□□□ -2.27
IRX4P78413 RNU6-1336P-201ENST00000383886 109 ntBASIC0.86□□□□□ -2.27
IRX4P78413 RNU6-125P-201ENST00000384505 107 ntBASIC0.86□□□□□ -2.27
IRX4P78413 RNU6-205P-201ENST00000390858 107 ntBASIC0.86□□□□□ -2.27
IRX4P78413 RNU6-1190P-201ENST00000410811 104 ntBASIC0.86□□□□□ -2.27
IRX4P78413 MTND5P15-201ENST00000434246 349 ntBASIC0.86□□□□□ -2.27
IRX4P78413 SNORA81.3-201ENST00000517283 198 ntBASIC0.86□□□□□ -2.27
IRX4P78413 RNU6-94P-201ENST00000607728 107 ntBASIC0.86□□□□□ -2.27
IRX4P78413 AC090425.1-201ENST00000610007 140 ntBASIC0.86□□□□□ -2.27
IRX4P78413 AL596211.1-201ENST00000569873 2277 ntBASIC0.85□□□□□ -2.27
IRX4P78413 MIR302B-201ENST00000362188 73 ntBASIC0.85□□□□□ -2.27
IRX4P78413 Y_RNA.29-201ENST00000362570 113 ntBASIC0.85□□□□□ -2.27
IRX4P78413 SNORA1.1-201ENST00000364671 133 ntBASIC0.85□□□□□ -2.27
IRX4P78413 RNU6-768P-201ENST00000384683 107 ntBASIC0.85□□□□□ -2.27
IRX4P78413 MIR624-201ENST00000385217 97 ntBASIC0.85□□□□□ -2.27
IRX4P78413 RNU7-120P-201ENST00000459334 63 ntBASIC0.85□□□□□ -2.27
IRX4P78413 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.85□□□□□ -2.27
IRX4P78413 RNU6-861P-201ENST00000516745 106 ntBASIC0.85□□□□□ -2.27
IRX4P78413 Y_RNA.700-201ENST00000516806 100 ntBASIC0.85□□□□□ -2.27
IRX4P78413 AC036111.3-201ENST00000526389 112 ntBASIC0.85□□□□□ -2.27
IRX4P78413 AP000753.3-201ENST00000604083 169 ntBASIC0.85□□□□□ -2.27
IRX4P78413 AL590095.2-201ENST00000604136 117 ntBASIC0.85□□□□□ -2.27
IRX4P78413 MIR6513-201ENST00000621188 64 ntBASIC0.85□□□□□ -2.27
IRX4P78413 AC091932.4-201ENST00000623386 200 ntBASIC0.85□□□□□ -2.27
IRX4P78413 MT-TN-201ENST00000387400 73 ntBASIC0.84□□□□□ -2.27
IRX4P78413 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.84□□□□□ -2.27
IRX4P78413 RNU6-994P-201ENST00000410507 111 ntBASIC0.84□□□□□ -2.27
IRX4P78413 RNU5E-9P-201ENST00000411164 104 ntBASIC0.84□□□□□ -2.27
IRX4P78413 AC004941.2-201ENST00000427009 228 ntBASIC0.84□□□□□ -2.27
IRX4P78413 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.84□□□□□ -2.27
IRX4P78413 RNU7-45P-201ENST00000459460 63 ntBASIC0.84□□□□□ -2.27
IRX4P78413 RNU7-80P-201ENST00000459562 61 ntBASIC0.84□□□□□ -2.27
IRX4P78413 RNU7-70P-201ENST00000516941 66 ntBASIC0.84□□□□□ -2.27
IRX4P78413 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.84□□□□□ -2.27
IRX4P78413 AC106800.4-201ENST00000614905 153 ntBASIC0.84□□□□□ -2.27
IRX4P78413 RNU6-682P-201ENST00000363843 106 ntBASIC0.83□□□□□ -2.28
IRX4P78413 SNORD113.3-201ENST00000364630 78 ntBASIC0.83□□□□□ -2.28
IRX4P78413 Y_RNA.357-201ENST00000365487 109 ntBASIC0.83□□□□□ -2.28
IRX4P78413 RNU6-597P-201ENST00000365620 102 ntBASIC0.83□□□□□ -2.28
IRX4P78413 Y_RNA.454-201ENST00000384224 113 ntBASIC0.83□□□□□ -2.28
IRX4P78413 MIR936-201ENST00000401264 98 ntBASIC0.83□□□□□ -2.28
IRX4P78413 RNU6-1149P-201ENST00000516810 97 ntBASIC0.83□□□□□ -2.28
IRX4P78413 MIR4264-201ENST00000583520 66 ntBASIC0.83□□□□□ -2.28
IRX4P78413 FAM71BP1-201ENST00000604431 523 ntBASIC0.83□□□□□ -2.28
IRX4P78413 Z97988.1-201ENST00000637697 135 ntBASIC0.83□□□□□ -2.28
IRX4P78413 MIR377-201ENST00000362145 69 ntBASIC0.82□□□□□ -2.28
IRX4P78413 Y_RNA.168-201ENST00000363740 102 ntBASIC0.82□□□□□ -2.28
IRX4P78413 Y_RNA.240-201ENST00000364469 95 ntBASIC0.82□□□□□ -2.28
IRX4P78413 Y_RNA.337-201ENST00000365312 102 ntBASIC0.82□□□□□ -2.28
IRX4P78413 Y_RNA.785-201ENST00000384290 109 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms