Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MIR508-201ENST00000384857 115 ntBASIC0.85□□□□□ -2.27
RHBDL3P58872 MIR588-201ENST00000384900 83 ntBASIC0.85□□□□□ -2.27
RHBDL3P58872 RNU6-602P-201ENST00000411155 105 ntBASIC0.85□□□□□ -2.27
RHBDL3P58872 AC244098.3-201ENST00000424803 96 ntBASIC0.85□□□□□ -2.27
RHBDL3P58872 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.85□□□□□ -2.27
RHBDL3P58872 MIR4643-201ENST00000577473 78 ntBASIC0.85□□□□□ -2.27
RHBDL3P58872 Z83818.1-201ENST00000603584 150 ntBASIC0.85□□□□□ -2.27
RHBDL3P58872 MIR6779-201ENST00000617283 64 ntBASIC0.85□□□□□ -2.27
RHBDL3P58872 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
RHBDL3P58872 MIR342-201ENST00000362212 99 ntBASIC0.84□□□□□ -2.27
RHBDL3P58872 Y_RNA.76-201ENST00000362931 109 ntBASIC0.84□□□□□ -2.27
RHBDL3P58872 RNU6-1165P-201ENST00000410119 107 ntBASIC0.84□□□□□ -2.27
RHBDL3P58872 snoU13.2-201ENST00000459201 104 ntBASIC0.84□□□□□ -2.27
RHBDL3P58872 AC004812.1-201ENST00000540773 146 ntBASIC0.84□□□□□ -2.27
RHBDL3P58872 MIR3129-201ENST00000581095 76 ntBASIC0.84□□□□□ -2.27
RHBDL3P58872 AC011921.3-201ENST00000605540 361 ntBASIC0.84□□□□□ -2.27
RHBDL3P58872 MIR6513-201ENST00000621188 64 ntBASIC0.84□□□□□ -2.27
RHBDL3P58872 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.84□□□□□ -2.27
RHBDL3P58872 MIR6866-201ENST00000638146 69 ntBASIC0.84□□□□□ -2.27
RHBDL3P58872 Y_RNA.162-201ENST00000363683 102 ntBASIC0.83□□□□□ -2.28
RHBDL3P58872 MIR573-201ENST00000384964 99 ntBASIC0.83□□□□□ -2.28
RHBDL3P58872 MIR520H-201ENST00000385126 88 ntBASIC0.83□□□□□ -2.28
RHBDL3P58872 MT-TF-201ENST00000387314 71 ntBASIC0.83□□□□□ -2.28
RHBDL3P58872 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.83□□□□□ -2.28
RHBDL3P58872 HMGN1P33-201ENST00000432945 451 ntBASIC0.83□□□□□ -2.28
RHBDL3P58872 Y_RNA.797-201ENST00000515977 94 ntBASIC0.83□□□□□ -2.28
RHBDL3P58872 MIR4676-201ENST00000583078 72 ntBASIC0.83□□□□□ -2.28
RHBDL3P58872 Y_RNA.20-201ENST00000362479 113 ntBASIC0.82□□□□□ -2.28
RHBDL3P58872 Y_RNA.133-201ENST00000363428 110 ntBASIC0.82□□□□□ -2.28
RHBDL3P58872 RNY4P28-201ENST00000365281 93 ntBASIC0.82□□□□□ -2.28
RHBDL3P58872 Y_RNA.350-201ENST00000365409 98 ntBASIC0.82□□□□□ -2.28
RHBDL3P58872 RNU6-578P-201ENST00000390980 103 ntBASIC0.82□□□□□ -2.28
RHBDL3P58872 MIR938-201ENST00000401216 83 ntBASIC0.82□□□□□ -2.28
RHBDL3P58872 RNU6-733P-201ENST00000410759 104 ntBASIC0.82□□□□□ -2.28
RHBDL3P58872 RNA5SP222-201ENST00000411039 105 ntBASIC0.82□□□□□ -2.28
RHBDL3P58872 MTND2P23-201ENST00000422990 651 ntBASIC0.82□□□□□ -2.28
RHBDL3P58872 MIR378D2-201ENST00000580636 98 ntBASIC0.82□□□□□ -2.28
RHBDL3P58872 MIR4804-201ENST00000581683 73 ntBASIC0.82□□□□□ -2.28
RHBDL3P58872 RN7SL793P-201ENST00000583259 296 ntBASIC0.82□□□□□ -2.28
RHBDL3P58872 MIR6740-201ENST00000618268 113 ntBASIC0.82□□□□□ -2.28
RHBDL3P58872 RNU6-369P-201ENST00000362515 102 ntBASIC0.81□□□□□ -2.28
RHBDL3P58872 SNORA20-201ENST00000384662 132 ntBASIC0.81□□□□□ -2.28
RHBDL3P58872 MIR1257-201ENST00000408490 117 ntBASIC0.81□□□□□ -2.28
RHBDL3P58872 snoU13.21-201ENST00000459368 105 ntBASIC0.81□□□□□ -2.28
RHBDL3P58872 Y_RNA.668-201ENST00000516233 93 ntBASIC0.81□□□□□ -2.28
RHBDL3P58872 RNA5SP121-201ENST00000516537 101 ntBASIC0.81□□□□□ -2.28
RHBDL3P58872 MIR6717-201ENST00000622747 73 ntBASIC0.81□□□□□ -2.28
RHBDL3P58872 AC010332.2-201ENST00000613083 1904 ntBASIC0.81□□□□□ -2.28
RHBDL3P58872 RNA5SP325-201ENST00000363756 130 ntBASIC0.8□□□□□ -2.28
RHBDL3P58872 SNORD27-201ENST00000363981 72 ntBASIC0.8□□□□□ -2.28
RHBDL3P58872 Y_RNA.205-201ENST00000364128 113 ntBASIC0.8□□□□□ -2.28
RHBDL3P58872 Y_RNA.308-201ENST00000365043 101 ntBASIC0.8□□□□□ -2.28
RHBDL3P58872 SNORD58.1-201ENST00000391313 66 ntBASIC0.8□□□□□ -2.28
RHBDL3P58872 RNU6-561P-201ENST00000516222 102 ntBASIC0.8□□□□□ -2.28
RHBDL3P58872 RNU4-71P-201ENST00000516258 113 ntBASIC0.8□□□□□ -2.28
RHBDL3P58872 AC018659.1-201ENST00000551083 169 ntBASIC0.8□□□□□ -2.28
RHBDL3P58872 MIR216A-201ENST00000385063 110 ntBASIC0.79□□□□□ -2.28
RHBDL3P58872 MIR936-201ENST00000401264 98 ntBASIC0.79□□□□□ -2.28
RHBDL3P58872 AL590095.2-201ENST00000604136 117 ntBASIC0.79□□□□□ -2.28
RHBDL3P58872 U4.1-201ENST00000620349 87 ntBASIC0.79□□□□□ -2.28
RHBDL3P58872 AC091932.4-201ENST00000623386 200 ntBASIC0.79□□□□□ -2.28
RHBDL3P58872 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
RHBDL3P58872 Y_RNA.430-201ENST00000384081 110 ntBASIC0.78□□□□□ -2.28
RHBDL3P58872 RNU6-364P-201ENST00000384387 107 ntBASIC0.78□□□□□ -2.28
RHBDL3P58872 Y_RNA.515-201ENST00000384535 112 ntBASIC0.78□□□□□ -2.28
RHBDL3P58872 RNU6-1319P-201ENST00000390855 104 ntBASIC0.78□□□□□ -2.28
RHBDL3P58872 RNU6-747P-201ENST00000390928 104 ntBASIC0.78□□□□□ -2.28
RHBDL3P58872 RNU6-241P-201ENST00000391148 104 ntBASIC0.78□□□□□ -2.28
RHBDL3P58872 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.78□□□□□ -2.28
RHBDL3P58872 RNU6-177P-201ENST00000411257 104 ntBASIC0.78□□□□□ -2.28
RHBDL3P58872 AC013244.2-201ENST00000603396 103 ntBASIC0.78□□□□□ -2.28
RHBDL3P58872 AC062037.2-201ENST00000610137 73 ntBASIC0.78□□□□□ -2.28
RHBDL3P58872 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
RHBDL3P58872 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.77□□□□□ -2.29
RHBDL3P58872 AL596211.1-201ENST00000569873 2277 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 Y_RNA.65-201ENST00000362846 100 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 RNA5SP499-201ENST00000363982 119 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 SNORA36.2-201ENST00000384004 127 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 MIR563-201ENST00000385080 79 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 RNU6-447P-201ENST00000410293 104 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 RNU6-1118P-201ENST00000410382 104 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 RNU6-1076P-201ENST00000410397 104 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 RNU6-355P-201ENST00000410427 104 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 RNU6-791P-201ENST00000410467 104 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 RNU6-705P-201ENST00000410601 104 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 RNU6-1100P-201ENST00000410691 104 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 RNU6-860P-201ENST00000410860 104 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 RNA5SP127-201ENST00000411051 133 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 RNU6-1217P-201ENST00000411276 104 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 RNU6-785P-201ENST00000411324 104 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 RNU6-893P-201ENST00000458841 100 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 RNU2-4P-201ENST00000606190 192 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 U6.90-201ENST00000614007 104 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 U6.70-201ENST00000620287 104 ntBASIC0.77□□□□□ -2.29
RHBDL3P58872 RNU4-70P-201ENST00000384579 139 ntBASIC0.76□□□□□ -2.29
RHBDL3P58872 RNY1P4-201ENST00000384595 115 ntBASIC0.76□□□□□ -2.29
RHBDL3P58872 MIR125B2-201ENST00000385128 89 ntBASIC0.76□□□□□ -2.29
RHBDL3P58872 RNU6-493P-201ENST00000391321 108 ntBASIC0.76□□□□□ -2.29
RHBDL3P58872 RNA5SP193-201ENST00000410353 107 ntBASIC0.76□□□□□ -2.29
RHBDL3P58872 RNU6-1190P-201ENST00000410811 104 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 204.7 ms