Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 RNU1-123P-201ENST00000458950 160 ntBASIC1.36□□□□□ -2.19
PMS2P54278 SNORA31.4-201ENST00000516049 129 ntBASIC1.36□□□□□ -2.19
PMS2P54278 Y_RNA.757-201ENST00000578934 114 ntBASIC1.36□□□□□ -2.19
PMS2P54278 AC091895.1-201ENST00000624494 256 ntBASIC1.36□□□□□ -2.19
PMS2P54278 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
PMS2P54278 AL022345.2-201ENST00000606307 135 ntBASIC1.35□□□□□ -2.19
PMS2P54278 AC008133.2-201ENST00000624540 351 ntBASIC1.35□□□□□ -2.19
PMS2P54278 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
PMS2P54278 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
PMS2P54278 RNU6-508P-201ENST00000363231 103 ntBASIC1.34□□□□□ -2.19
PMS2P54278 RNU1-133P-201ENST00000364867 167 ntBASIC1.34□□□□□ -2.19
PMS2P54278 snoU13.16-201ENST00000459350 104 ntBASIC1.34□□□□□ -2.19
PMS2P54278 RNU7-53P-201ENST00000516705 60 ntBASIC1.34□□□□□ -2.19
PMS2P54278 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.34□□□□□ -2.19
PMS2P54278 MIR8055-201ENST00000610739 97 ntBASIC1.34□□□□□ -2.19
PMS2P54278 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.33□□□□□ -2.2
PMS2P54278 MIR26B-201ENST00000362251 77 ntBASIC1.33□□□□□ -2.2
PMS2P54278 Y_RNA.114-201ENST00000363265 113 ntBASIC1.33□□□□□ -2.2
PMS2P54278 Y_RNA.191-201ENST00000363972 113 ntBASIC1.33□□□□□ -2.2
PMS2P54278 SNORA51.10-201ENST00000384418 136 ntBASIC1.33□□□□□ -2.2
PMS2P54278 AL158147.1-201ENST00000443970 75 ntBASIC1.33□□□□□ -2.2
PMS2P54278 RNU7-67P-201ENST00000459003 62 ntBASIC1.33□□□□□ -2.2
PMS2P54278 RNU2-11P-201ENST00000459191 187 ntBASIC1.33□□□□□ -2.2
PMS2P54278 RNU7-41P-201ENST00000515917 61 ntBASIC1.33□□□□□ -2.2
PMS2P54278 SNORD111.1-201ENST00000516421 86 ntBASIC1.33□□□□□ -2.2
PMS2P54278 RNA5SP102-201ENST00000516865 106 ntBASIC1.33□□□□□ -2.2
PMS2P54278 RNU7-70P-201ENST00000516941 66 ntBASIC1.33□□□□□ -2.2
PMS2P54278 RNU6-958P-201ENST00000516995 106 ntBASIC1.33□□□□□ -2.2
PMS2P54278 AP003716.2-201ENST00000528260 108 ntBASIC1.33□□□□□ -2.2
PMS2P54278 MIR3192-201ENST00000584920 77 ntBASIC1.33□□□□□ -2.2
PMS2P54278 AL096861.1-201ENST00000610899 123 ntBASIC1.33□□□□□ -2.2
PMS2P54278 MIR6078-201ENST00000611069 100 ntBASIC1.33□□□□□ -2.2
PMS2P54278 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.33□□□□□ -2.2
PMS2P54278 AL157777.2-201ENST00000258070 137 ntBASIC1.32□□□□□ -2.2
PMS2P54278 RNU6-647P-201ENST00000364243 107 ntBASIC1.32□□□□□ -2.2
PMS2P54278 RNY1P6-201ENST00000384193 109 ntBASIC1.32□□□□□ -2.2
PMS2P54278 RNU6-80P-201ENST00000384195 107 ntBASIC1.32□□□□□ -2.2
PMS2P54278 MIR570-201ENST00000384917 97 ntBASIC1.32□□□□□ -2.2
PMS2P54278 RNU6-1319P-201ENST00000390855 104 ntBASIC1.32□□□□□ -2.2
PMS2P54278 RNU6-747P-201ENST00000390928 104 ntBASIC1.32□□□□□ -2.2
PMS2P54278 RNU6-241P-201ENST00000391148 104 ntBASIC1.32□□□□□ -2.2
PMS2P54278 Y_RNA.617-201ENST00000410920 90 ntBASIC1.32□□□□□ -2.2
PMS2P54278 RNU6-177P-201ENST00000411257 104 ntBASIC1.32□□□□□ -2.2
PMS2P54278 RPL39P39-201ENST00000455840 151 ntBASIC1.32□□□□□ -2.2
PMS2P54278 AL133373.1-201ENST00000497098 94 ntBASIC1.32□□□□□ -2.2
PMS2P54278 RNU6-971P-201ENST00000516920 106 ntBASIC1.32□□□□□ -2.2
PMS2P54278 RNA5SP48-201ENST00000363969 126 ntBASIC1.31□□□□□ -2.2
PMS2P54278 Y_RNA.430-201ENST00000384081 110 ntBASIC1.31□□□□□ -2.2
PMS2P54278 Y_RNA.466-201ENST00000384294 113 ntBASIC1.31□□□□□ -2.2
PMS2P54278 RNU6-939P-201ENST00000384634 107 ntBASIC1.31□□□□□ -2.2
PMS2P54278 RNU6-913P-201ENST00000390913 95 ntBASIC1.31□□□□□ -2.2
PMS2P54278 SNORA26.6-201ENST00000391256 115 ntBASIC1.31□□□□□ -2.2
PMS2P54278 RNU6-1054P-201ENST00000411293 104 ntBASIC1.31□□□□□ -2.2
PMS2P54278 snoU13.25-201ENST00000458945 104 ntBASIC1.31□□□□□ -2.2
PMS2P54278 RNU6-165P-201ENST00000517170 99 ntBASIC1.31□□□□□ -2.2
PMS2P54278 AL020996.3-201ENST00000606617 222 ntBASIC1.31□□□□□ -2.2
PMS2P54278 MIR4251-201ENST00000635819 61 ntBASIC1.31□□□□□ -2.2
PMS2P54278 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.31□□□□□ -2.2
PMS2P54278 AL596211.1-201ENST00000569873 2277 ntBASIC1.31□□□□□ -2.2
PMS2P54278 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
PMS2P54278 MIR302B-201ENST00000362188 73 ntBASIC1.3□□□□□ -2.2
PMS2P54278 Y_RNA.71-201ENST00000362892 104 ntBASIC1.3□□□□□ -2.2
PMS2P54278 Y_RNA.218-201ENST00000364218 104 ntBASIC1.3□□□□□ -2.2
PMS2P54278 Y_RNA.294-201ENST00000364916 102 ntBASIC1.3□□□□□ -2.2
PMS2P54278 RNU6-1211P-201ENST00000459179 105 ntBASIC1.3□□□□□ -2.2
PMS2P54278 RN7SKP179-201ENST00000516126 217 ntBASIC1.3□□□□□ -2.2
PMS2P54278 MIR4452-201ENST00000583004 71 ntBASIC1.3□□□□□ -2.2
PMS2P54278 Z97988.1-201ENST00000637697 135 ntBASIC1.3□□□□□ -2.2
PMS2P54278 RNU6-53P-201ENST00000365367 106 ntBASIC1.29□□□□□ -2.2
PMS2P54278 RNU6-1117P-201ENST00000384525 104 ntBASIC1.29□□□□□ -2.2
PMS2P54278 RNA5SP261-201ENST00000410536 106 ntBASIC1.29□□□□□ -2.2
PMS2P54278 MIR3152-201ENST00000579801 74 ntBASIC1.29□□□□□ -2.2
PMS2P54278 SNORA4-201ENST00000584302 138 ntBASIC1.29□□□□□ -2.2
PMS2P54278 AC108081.1-201ENST00000604358 221 ntBASIC1.29□□□□□ -2.2
PMS2P54278 AC021613.1-201ENST00000623880 111 ntBASIC1.29□□□□□ -2.2
PMS2P54278 SNORD116-14-201ENST00000383894 92 ntBASIC1.28□□□□□ -2.2
PMS2P54278 SNORD116-17-201ENST00000383929 92 ntBASIC1.28□□□□□ -2.2
PMS2P54278 SNORD116-15-201ENST00000384445 92 ntBASIC1.28□□□□□ -2.2
PMS2P54278 SNORD116-19-201ENST00000384729 92 ntBASIC1.28□□□□□ -2.2
PMS2P54278 MIR1302-7-201ENST00000408841 72 ntBASIC1.28□□□□□ -2.2
PMS2P54278 RNU6-947P-201ENST00000516264 106 ntBASIC1.28□□□□□ -2.2
PMS2P54278 Y_RNA.712-201ENST00000517011 92 ntBASIC1.28□□□□□ -2.2
PMS2P54278 IGKV1-22-201ENST00000524313 326 ntBASIC1.28□□□□□ -2.2
PMS2P54278 MIR548AO-201ENST00000579992 96 ntBASIC1.28□□□□□ -2.2
PMS2P54278 PRELID3BP2-201ENST00000605362 201 ntBASIC1.28□□□□□ -2.2
PMS2P54278 MIR6717-201ENST00000622747 73 ntBASIC1.28□□□□□ -2.2
PMS2P54278 MIR6841-201ENST00000637129 72 ntBASIC1.28□□□□□ -2.2
PMS2P54278 MIR342-201ENST00000362212 99 ntBASIC1.27□□□□□ -2.21
PMS2P54278 Y_RNA.127-201ENST00000363386 109 ntBASIC1.27□□□□□ -2.21
PMS2P54278 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
PMS2P54278 RNU6-22P-201ENST00000384355 107 ntBASIC1.27□□□□□ -2.21
PMS2P54278 MIRLET7F2-201ENST00000385277 83 ntBASIC1.27□□□□□ -2.21
PMS2P54278 MIR618-201ENST00000385287 98 ntBASIC1.27□□□□□ -2.21
PMS2P54278 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.27□□□□□ -2.21
PMS2P54278 RNU6-893P-201ENST00000458841 100 ntBASIC1.27□□□□□ -2.21
PMS2P54278 RN7SKP19-201ENST00000516016 252 ntBASIC1.27□□□□□ -2.21
PMS2P54278 RNU6-479P-201ENST00000516348 105 ntBASIC1.27□□□□□ -2.21
PMS2P54278 RNU6-659P-201ENST00000516454 104 ntBASIC1.27□□□□□ -2.21
PMS2P54278 RNU11-2P-201ENST00000516898 142 ntBASIC1.27□□□□□ -2.21
PMS2P54278 AC019288.1-201ENST00000557918 224 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms