Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RNU6-1292P-201ENST00000383856 107 ntBASIC0.9□□□□□ -2.27
PDX1P52945 SNORA22-201ENST00000383907 134 ntBASIC0.9□□□□□ -2.27
PDX1P52945 Y_RNA.515-201ENST00000384535 112 ntBASIC0.9□□□□□ -2.27
PDX1P52945 SNORA22C-201ENST00000384614 134 ntBASIC0.9□□□□□ -2.27
PDX1P52945 Y_RNA.552-201ENST00000384665 112 ntBASIC0.9□□□□□ -2.27
PDX1P52945 MIR942-201ENST00000401111 86 ntBASIC0.9□□□□□ -2.27
PDX1P52945 Y_RNA.644-201ENST00000459006 113 ntBASIC0.9□□□□□ -2.27
PDX1P52945 snoU13.21-201ENST00000459368 105 ntBASIC0.9□□□□□ -2.27
PDX1P52945 RNU7-45P-201ENST00000459460 63 ntBASIC0.9□□□□□ -2.27
PDX1P52945 Y_RNA.674-201ENST00000516362 113 ntBASIC0.9□□□□□ -2.27
PDX1P52945 MIR8055-201ENST00000610739 97 ntBASIC0.9□□□□□ -2.27
PDX1P52945 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
PDX1P52945 AL391516.1-201ENST00000554380 2449 ntBASIC0.89□□□□□ -2.27
PDX1P52945 Y_RNA.168-201ENST00000363740 102 ntBASIC0.89□□□□□ -2.27
PDX1P52945 RNU1-133P-201ENST00000364867 167 ntBASIC0.89□□□□□ -2.27
PDX1P52945 MIR200A-201ENST00000384875 90 ntBASIC0.89□□□□□ -2.27
PDX1P52945 MT-TN-201ENST00000387400 73 ntBASIC0.89□□□□□ -2.27
PDX1P52945 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
PDX1P52945 AC244023.1-201ENST00000426884 112 ntBASIC0.89□□□□□ -2.27
PDX1P52945 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.89□□□□□ -2.27
PDX1P52945 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.89□□□□□ -2.27
PDX1P52945 MIR4431-201ENST00000579990 94 ntBASIC0.89□□□□□ -2.27
PDX1P52945 AC242498.1-201ENST00000604134 111 ntBASIC0.89□□□□□ -2.27
PDX1P52945 uc_338.6-201ENST00000613544 171 ntBASIC0.89□□□□□ -2.27
PDX1P52945 AC091932.4-201ENST00000623386 200 ntBASIC0.89□□□□□ -2.27
PDX1P52945 Z97988.1-201ENST00000637697 135 ntBASIC0.89□□□□□ -2.27
PDX1P52945 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.88□□□□□ -2.27
PDX1P52945 MIR377-201ENST00000362145 69 ntBASIC0.88□□□□□ -2.27
PDX1P52945 SNORD113.3-201ENST00000364630 78 ntBASIC0.88□□□□□ -2.27
PDX1P52945 RNU6-200P-201ENST00000364743 107 ntBASIC0.88□□□□□ -2.27
PDX1P52945 SNORD114-24-201ENST00000365029 72 ntBASIC0.88□□□□□ -2.27
PDX1P52945 RNU6-1335P-201ENST00000365426 107 ntBASIC0.88□□□□□ -2.27
PDX1P52945 RNU5E-9P-201ENST00000411164 104 ntBASIC0.88□□□□□ -2.27
PDX1P52945 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.88□□□□□ -2.27
PDX1P52945 PDCD5P2-201ENST00000507570 312 ntBASIC0.88□□□□□ -2.27
PDX1P52945 MIR4698-201ENST00000577795 80 ntBASIC0.88□□□□□ -2.27
PDX1P52945 Y_RNA.351-201ENST00000365436 96 ntBASIC0.87□□□□□ -2.27
PDX1P52945 RNU6-768P-201ENST00000384683 107 ntBASIC0.87□□□□□ -2.27
PDX1P52945 MIR624-201ENST00000385217 97 ntBASIC0.87□□□□□ -2.27
PDX1P52945 SNORA26.6-201ENST00000391256 115 ntBASIC0.87□□□□□ -2.27
PDX1P52945 RNA5SP127-201ENST00000411051 133 ntBASIC0.87□□□□□ -2.27
PDX1P52945 RNU6-602P-201ENST00000411155 105 ntBASIC0.87□□□□□ -2.27
PDX1P52945 Y_RNA.793-201ENST00000411222 111 ntBASIC0.87□□□□□ -2.27
PDX1P52945 SCARNA15-202ENST00000516881 127 ntBASIC0.87□□□□□ -2.27
PDX1P52945 AP002392.1-201ENST00000537692 208 ntBASIC0.87□□□□□ -2.27
PDX1P52945 MIR4264-201ENST00000583520 66 ntBASIC0.87□□□□□ -2.27
PDX1P52945 Y_RNA.257-201ENST00000364596 102 ntBASIC0.86□□□□□ -2.27
PDX1P52945 SNORA1.1-201ENST00000364671 133 ntBASIC0.86□□□□□ -2.27
PDX1P52945 SNORD111-201ENST00000408139 94 ntBASIC0.86□□□□□ -2.27
PDX1P52945 RNU6-994P-201ENST00000410507 111 ntBASIC0.86□□□□□ -2.27
PDX1P52945 RNA5SP255-201ENST00000516370 107 ntBASIC0.86□□□□□ -2.27
PDX1P52945 RNU6-1149P-201ENST00000516810 97 ntBASIC0.86□□□□□ -2.27
PDX1P52945 AP000753.3-201ENST00000604083 169 ntBASIC0.86□□□□□ -2.27
PDX1P52945 MIR6740-201ENST00000618268 113 ntBASIC0.86□□□□□ -2.27
PDX1P52945 AL596211.1-201ENST00000569873 2277 ntBASIC0.86□□□□□ -2.27
PDX1P52945 RNU6-369P-201ENST00000362515 102 ntBASIC0.85□□□□□ -2.27
PDX1P52945 RNU6-682P-201ENST00000363843 106 ntBASIC0.85□□□□□ -2.27
PDX1P52945 RNU6-1082P-201ENST00000364574 107 ntBASIC0.85□□□□□ -2.27
PDX1P52945 RNU6-580P-201ENST00000365159 107 ntBASIC0.85□□□□□ -2.27
PDX1P52945 RNU6-597P-201ENST00000365620 102 ntBASIC0.85□□□□□ -2.27
PDX1P52945 Y_RNA.393-201ENST00000383936 102 ntBASIC0.85□□□□□ -2.27
PDX1P52945 AC015818.7-201ENST00000428754 109 ntBASIC0.85□□□□□ -2.27
PDX1P52945 AC087499.7-201ENST00000441958 109 ntBASIC0.85□□□□□ -2.27
PDX1P52945 RNU7-62P-201ENST00000458856 62 ntBASIC0.85□□□□□ -2.27
PDX1P52945 RNU6-861P-201ENST00000516745 106 ntBASIC0.85□□□□□ -2.27
PDX1P52945 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.85□□□□□ -2.27
PDX1P52945 MIR4714-201ENST00000580728 77 ntBASIC0.85□□□□□ -2.27
PDX1P52945 FAM71BP1-201ENST00000604431 523 ntBASIC0.85□□□□□ -2.27
PDX1P52945 AC072026.1-201ENST00000605023 201 ntBASIC0.85□□□□□ -2.27
PDX1P52945 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.85□□□□□ -2.27
PDX1P52945 Y_RNA.36-201ENST00000362602 112 ntBASIC0.84□□□□□ -2.27
PDX1P52945 SNORA25.7-201ENST00000364375 127 ntBASIC0.84□□□□□ -2.27
PDX1P52945 RNU6-1187P-201ENST00000364771 110 ntBASIC0.84□□□□□ -2.27
PDX1P52945 Y_RNA.521-201ENST00000384560 114 ntBASIC0.84□□□□□ -2.27
PDX1P52945 SNORD83.1-201ENST00000411362 77 ntBASIC0.84□□□□□ -2.27
PDX1P52945 RPS3AP1-201ENST00000413190 320 ntBASIC0.84□□□□□ -2.27
PDX1P52945 UBL5P1-201ENST00000507979 193 ntBASIC0.84□□□□□ -2.27
PDX1P52945 AC107027.2-201ENST00000512197 115 ntBASIC0.84□□□□□ -2.27
PDX1P52945 AC012676.2-201ENST00000619258 186 ntBASIC0.84□□□□□ -2.27
PDX1P52945 MTND5P32-201ENST00000560711 1802 ntBASIC0.83□□□□□ -2.28
PDX1P52945 MIR302B-201ENST00000362188 73 ntBASIC0.83□□□□□ -2.28
PDX1P52945 RNA5SP325-201ENST00000363756 130 ntBASIC0.83□□□□□ -2.28
PDX1P52945 RNU6-312P-201ENST00000364629 107 ntBASIC0.83□□□□□ -2.28
PDX1P52945 SNORD38B-201ENST00000384690 67 ntBASIC0.83□□□□□ -2.28
PDX1P52945 MIR605-201ENST00000385078 83 ntBASIC0.83□□□□□ -2.28
PDX1P52945 SNORD89-201ENST00000390981 114 ntBASIC0.83□□□□□ -2.28
PDX1P52945 FABP5P4-201ENST00000437203 171 ntBASIC0.83□□□□□ -2.28
PDX1P52945 RNU7-120P-201ENST00000459334 63 ntBASIC0.83□□□□□ -2.28
PDX1P52945 MIR6717-201ENST00000622747 73 ntBASIC0.83□□□□□ -2.28
PDX1P52945 SNORD38B-202ENST00000625943 69 ntBASIC0.83□□□□□ -2.28
PDX1P52945 MIR3658-201ENST00000636291 56 ntBASIC0.83□□□□□ -2.28
PDX1P52945 Y_RNA.52-201ENST00000362760 96 ntBASIC0.82□□□□□ -2.28
PDX1P52945 Y_RNA.240-201ENST00000364469 95 ntBASIC0.82□□□□□ -2.28
PDX1P52945 RNU4-16P-201ENST00000364737 141 ntBASIC0.82□□□□□ -2.28
PDX1P52945 SNORD12C-201ENST00000386307 89 ntBASIC0.82□□□□□ -2.28
PDX1P52945 MIR1827-201ENST00000408549 66 ntBASIC0.82□□□□□ -2.28
PDX1P52945 POLR2J4-204ENST00000418424 324 ntBASIC0.82□□□□□ -2.28
PDX1P52945 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.82□□□□□ -2.28
PDX1P52945 RNU7-80P-201ENST00000459562 61 ntBASIC0.82□□□□□ -2.28
PDX1P52945 AC074198.2-201ENST00000508153 258 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 348.9 ms