Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 AC138907.6-201ENST00000568401 126 ntBASIC0.69□□□□□ -2.3
EFNA3P52797 MIR3129-201ENST00000581095 76 ntBASIC0.69□□□□□ -2.3
EFNA3P52797 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.69□□□□□ -2.3
EFNA3P52797 MIR411-201ENST00000362239 96 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 RNU1-133P-201ENST00000364867 167 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 RNU6-275P-201ENST00000364910 107 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 RNU6-1292P-201ENST00000383856 107 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 RNU6-643P-201ENST00000384018 107 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 SNORA1-201ENST00000384107 130 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 Y_RNA.454-201ENST00000384224 113 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 Y_RNA.476-201ENST00000384347 108 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 Y_RNA.552-201ENST00000384665 112 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 MIR608-201ENST00000384820 100 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 SNORD77.3-201ENST00000391113 65 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 MIR1302-7-201ENST00000408841 72 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 RNU6-613P-201ENST00000410412 108 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.68□□□□□ -2.3
EFNA3P52797 AL138752.1-201ENST00000452964 351 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 RNU7-80P-201ENST00000459562 61 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 RNU7-70P-201ENST00000516941 66 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 AC009779.6-201ENST00000603972 165 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 AC106800.4-201ENST00000614905 153 ntBASIC0.68□□□□□ -2.3
EFNA3P52797 Y_RNA.351-201ENST00000365436 96 ntBASIC0.67□□□□□ -2.3
EFNA3P52797 Y_RNA.440-201ENST00000384120 114 ntBASIC0.67□□□□□ -2.3
EFNA3P52797 SNORD38B-201ENST00000384690 67 ntBASIC0.67□□□□□ -2.3
EFNA3P52797 MIR7-2-201ENST00000384970 110 ntBASIC0.67□□□□□ -2.3
EFNA3P52797 MT-TN-201ENST00000387400 73 ntBASIC0.67□□□□□ -2.3
EFNA3P52797 RNA5SP261-201ENST00000410536 106 ntBASIC0.67□□□□□ -2.3
EFNA3P52797 RNU2-64P-201ENST00000411315 191 ntBASIC0.67□□□□□ -2.3
EFNA3P52797 RNU2-11P-201ENST00000459191 187 ntBASIC0.67□□□□□ -2.3
EFNA3P52797 RNU6-998P-201ENST00000515894 101 ntBASIC0.67□□□□□ -2.3
EFNA3P52797 AC036111.3-201ENST00000526389 112 ntBASIC0.67□□□□□ -2.3
EFNA3P52797 AL365205.2-201ENST00000594586 68 ntBASIC0.67□□□□□ -2.3
EFNA3P52797 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.67□□□□□ -2.3
EFNA3P52797 SNORD38B-202ENST00000625943 69 ntBASIC0.67□□□□□ -2.3
EFNA3P52797 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
EFNA3P52797 MIR377-201ENST00000362145 69 ntBASIC0.66□□□□□ -2.3
EFNA3P52797 Y_RNA.36-201ENST00000362602 112 ntBASIC0.66□□□□□ -2.3
EFNA3P52797 Y_RNA.75-201ENST00000362927 97 ntBASIC0.66□□□□□ -2.3
EFNA3P52797 Y_RNA.168-201ENST00000363740 102 ntBASIC0.66□□□□□ -2.3
EFNA3P52797 SNORA25.7-201ENST00000364375 127 ntBASIC0.66□□□□□ -2.3
EFNA3P52797 SNORA1.1-201ENST00000364671 133 ntBASIC0.66□□□□□ -2.3
EFNA3P52797 Y_RNA.435-201ENST00000384095 112 ntBASIC0.66□□□□□ -2.3
EFNA3P52797 Y_RNA.521-201ENST00000384560 114 ntBASIC0.66□□□□□ -2.3
EFNA3P52797 Y_RNA.540-201ENST00000384638 111 ntBASIC0.66□□□□□ -2.3
EFNA3P52797 MT-TG-201ENST00000387429 68 ntBASIC0.66□□□□□ -2.3
EFNA3P52797 MIR548I3-201ENST00000408378 149 ntBASIC0.66□□□□□ -2.3
EFNA3P52797 AC006461.1-201ENST00000412637 326 ntBASIC0.66□□□□□ -2.3
EFNA3P52797 SEPT7P4-201ENST00000437076 306 ntBASIC0.66□□□□□ -2.3
EFNA3P52797 AC004812.1-201ENST00000540773 146 ntBASIC0.66□□□□□ -2.3
EFNA3P52797 MIR4264-201ENST00000583520 66 ntBASIC0.66□□□□□ -2.3
EFNA3P52797 MIR5197-201ENST00000583721 112 ntBASIC0.66□□□□□ -2.3
EFNA3P52797 AL136317.1-201ENST00000612653 226 ntBASIC0.66□□□□□ -2.3
EFNA3P52797 AC141273.2-201ENST00000618989 130 ntBASIC0.66□□□□□ -2.3
EFNA3P52797 Y_RNA.297-201ENST00000364950 91 ntBASIC0.65□□□□□ -2.31
EFNA3P52797 RNU6-913P-201ENST00000390913 95 ntBASIC0.65□□□□□ -2.31
EFNA3P52797 RNU6-918P-201ENST00000391219 106 ntBASIC0.65□□□□□ -2.31
EFNA3P52797 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.65□□□□□ -2.31
EFNA3P52797 RNA5SP127-201ENST00000411051 133 ntBASIC0.65□□□□□ -2.31
EFNA3P52797 RPS26P5-201ENST00000418544 335 ntBASIC0.65□□□□□ -2.31
EFNA3P52797 AL606490.4-201ENST00000423117 127 ntBASIC0.65□□□□□ -2.31
EFNA3P52797 MRPS18CP4-201ENST00000535821 231 ntBASIC0.65□□□□□ -2.31
EFNA3P52797 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
EFNA3P52797 U6.106-201ENST00000636360 105 ntBASIC0.65□□□□□ -2.31
EFNA3P52797 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
EFNA3P52797 RNU6-379P-201ENST00000363813 104 ntBASIC0.64□□□□□ -2.31
EFNA3P52797 RNU6-978P-201ENST00000364371 103 ntBASIC0.64□□□□□ -2.31
EFNA3P52797 Y_RNA.412-201ENST00000384001 104 ntBASIC0.64□□□□□ -2.31
EFNA3P52797 RNU6-125P-201ENST00000384505 107 ntBASIC0.64□□□□□ -2.31
EFNA3P52797 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
EFNA3P52797 RNU6-205P-201ENST00000390858 107 ntBASIC0.64□□□□□ -2.31
EFNA3P52797 SNORD99-201ENST00000408612 74 ntBASIC0.64□□□□□ -2.31
EFNA3P52797 Y_RNA.793-201ENST00000411222 111 ntBASIC0.64□□□□□ -2.31
EFNA3P52797 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.64□□□□□ -2.31
EFNA3P52797 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.64□□□□□ -2.31
EFNA3P52797 AC130289.1-201ENST00000577321 73 ntBASIC0.64□□□□□ -2.31
EFNA3P52797 Z97988.1-201ENST00000637697 135 ntBASIC0.64□□□□□ -2.31
EFNA3P52797 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.64□□□□□ -2.31
EFNA3P52797 MIR1-1-201ENST00000362147 71 ntBASIC0.63□□□□□ -2.31
EFNA3P52797 RNA5SP499-201ENST00000363982 119 ntBASIC0.63□□□□□ -2.31
EFNA3P52797 Y_RNA.357-201ENST00000365487 109 ntBASIC0.63□□□□□ -2.31
EFNA3P52797 MIR216A-201ENST00000385063 110 ntBASIC0.63□□□□□ -2.31
EFNA3P52797 Y_RNA.644-201ENST00000459006 113 ntBASIC0.63□□□□□ -2.31
EFNA3P52797 U7.7-201ENST00000459276 60 ntBASIC0.63□□□□□ -2.31
EFNA3P52797 Y_RNA.674-201ENST00000516362 113 ntBASIC0.63□□□□□ -2.31
EFNA3P52797 RNU6-388P-201ENST00000517012 105 ntBASIC0.63□□□□□ -2.31
EFNA3P52797 RNU6-389P-201ENST00000517048 105 ntBASIC0.63□□□□□ -2.31
EFNA3P52797 MIR3152-201ENST00000579801 74 ntBASIC0.63□□□□□ -2.31
EFNA3P52797 MIR4431-201ENST00000579990 94 ntBASIC0.63□□□□□ -2.31
EFNA3P52797 AC025627.3-201ENST00000582078 182 ntBASIC0.63□□□□□ -2.31
EFNA3P52797 AC072026.1-201ENST00000605023 201 ntBASIC0.63□□□□□ -2.31
EFNA3P52797 AL353765.1-201ENST00000605514 183 ntBASIC0.63□□□□□ -2.31
EFNA3P52797 MIR8055-201ENST00000610739 97 ntBASIC0.63□□□□□ -2.31
EFNA3P52797 AL596211.1-201ENST00000569873 2277 ntBASIC0.63□□□□□ -2.31
EFNA3P52797 SNORD114-26-201ENST00000363543 72 ntBASIC0.62□□□□□ -2.31
EFNA3P52797 Y_RNA.233-201ENST00000364407 101 ntBASIC0.62□□□□□ -2.31
EFNA3P52797 RNU6-312P-201ENST00000364629 107 ntBASIC0.62□□□□□ -2.31
EFNA3P52797 Y_RNA.274-201ENST00000364714 101 ntBASIC0.62□□□□□ -2.31
EFNA3P52797 RNU6-47P-201ENST00000383866 107 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 239.4 ms