Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.38□□□□□ -2.35
SMSP52788 MIRLET7D-201ENST00000362263 87 ntBASIC0.37□□□□□ -2.35
SMSP52788 MIR30D-201ENST00000362283 70 ntBASIC0.37□□□□□ -2.35
SMSP52788 Y_RNA.91-201ENST00000363042 107 ntBASIC0.37□□□□□ -2.35
SMSP52788 SNORA33.2-201ENST00000365413 134 ntBASIC0.37□□□□□ -2.35
SMSP52788 MIR1257-201ENST00000408490 117 ntBASIC0.37□□□□□ -2.35
SMSP52788 RNA5SP261-201ENST00000410536 106 ntBASIC0.37□□□□□ -2.35
SMSP52788 MTND5P22-201ENST00000458380 195 ntBASIC0.37□□□□□ -2.35
SMSP52788 SNORA68.3-201ENST00000515906 83 ntBASIC0.37□□□□□ -2.35
SMSP52788 SCARNA24.2-201ENST00000516968 130 ntBASIC0.37□□□□□ -2.35
SMSP52788 AP001282.2-201ENST00000616149 309 ntBASIC0.37□□□□□ -2.35
SMSP52788 MIR335-201ENST00000362173 94 ntBASIC0.36□□□□□ -2.35
SMSP52788 SNORA26.6-201ENST00000391256 115 ntBASIC0.36□□□□□ -2.35
SMSP52788 AC002350.1-201ENST00000490759 375 ntBASIC0.36□□□□□ -2.35
SMSP52788 AL162730.1-201ENST00000605734 292 ntBASIC0.36□□□□□ -2.35
SMSP52788 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.36□□□□□ -2.35
SMSP52788 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
SMSP52788 Y_RNA.117-201ENST00000363294 101 ntBASIC0.35□□□□□ -2.35
SMSP52788 RNU6-1309P-201ENST00000363305 108 ntBASIC0.35□□□□□ -2.35
SMSP52788 RNU6-740P-201ENST00000364734 105 ntBASIC0.35□□□□□ -2.35
SMSP52788 RNU6-639P-201ENST00000384074 107 ntBASIC0.35□□□□□ -2.35
SMSP52788 RNU6-364P-201ENST00000384387 107 ntBASIC0.35□□□□□ -2.35
SMSP52788 Y_RNA.542-201ENST00000384641 111 ntBASIC0.35□□□□□ -2.35
SMSP52788 RNU6-1109P-201ENST00000391187 107 ntBASIC0.35□□□□□ -2.35
SMSP52788 RNU6-1190P-201ENST00000410811 104 ntBASIC0.35□□□□□ -2.35
SMSP52788 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.35□□□□□ -2.35
SMSP52788 RNU7-102P-201ENST00000458948 62 ntBASIC0.35□□□□□ -2.35
SMSP52788 MIR4282-201ENST00000583613 67 ntBASIC0.35□□□□□ -2.35
SMSP52788 AC092634.7-201ENST00000621022 103 ntBASIC0.35□□□□□ -2.35
SMSP52788 MIR6717-201ENST00000622747 73 ntBASIC0.35□□□□□ -2.35
SMSP52788 RNU6-797P-201ENST00000363101 109 ntBASIC0.34□□□□□ -2.36
SMSP52788 RNA5SP62-201ENST00000363457 110 ntBASIC0.34□□□□□ -2.36
SMSP52788 Y_RNA.178-201ENST00000363832 102 ntBASIC0.34□□□□□ -2.36
SMSP52788 Y_RNA.430-201ENST00000384081 110 ntBASIC0.34□□□□□ -2.36
SMSP52788 TRBVB-201ENST00000477100 408 ntBASIC0.34□□□□□ -2.36
SMSP52788 RNU7-156P-201ENST00000517214 74 ntBASIC0.34□□□□□ -2.36
SMSP52788 MIR4514-201ENST00000581410 57 ntBASIC0.34□□□□□ -2.36
SMSP52788 AL356055.1-201ENST00000602528 446 ntBASIC0.34□□□□□ -2.36
SMSP52788 AC008608.1-201ENST00000603910 127 ntBASIC0.34□□□□□ -2.36
SMSP52788 U2.14-201ENST00000615943 113 ntBASIC0.34□□□□□ -2.36
SMSP52788 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.34□□□□□ -2.36
SMSP52788 snoU2_19.4-201ENST00000364329 80 ntBASIC0.33□□□□□ -2.36
SMSP52788 Y_RNA.304-201ENST00000365011 112 ntBASIC0.33□□□□□ -2.36
SMSP52788 SNORD12C-201ENST00000386307 89 ntBASIC0.33□□□□□ -2.36
SMSP52788 MT-TT-201ENST00000387460 66 ntBASIC0.33□□□□□ -2.36
SMSP52788 AL606845.1-201ENST00000404881 255 ntBASIC0.33□□□□□ -2.36
SMSP52788 AL138752.1-201ENST00000452964 351 ntBASIC0.33□□□□□ -2.36
SMSP52788 RNU7-80P-201ENST00000459562 61 ntBASIC0.33□□□□□ -2.36
SMSP52788 RNU6-570P-201ENST00000517051 105 ntBASIC0.33□□□□□ -2.36
SMSP52788 RNU6-653P-201ENST00000363074 106 ntBASIC0.32□□□□□ -2.36
SMSP52788 Y_RNA.237-201ENST00000364439 102 ntBASIC0.32□□□□□ -2.36
SMSP52788 RNU6-1327P-201ENST00000365302 105 ntBASIC0.32□□□□□ -2.36
SMSP52788 RNU6-1292P-201ENST00000383856 107 ntBASIC0.32□□□□□ -2.36
SMSP52788 Y_RNA.518-201ENST00000384552 113 ntBASIC0.32□□□□□ -2.36
SMSP52788 RNA5SP63-201ENST00000391225 112 ntBASIC0.32□□□□□ -2.36
SMSP52788 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
SMSP52788 Y_RNA.701-201ENST00000516812 110 ntBASIC0.32□□□□□ -2.36
SMSP52788 MIR5197-201ENST00000583721 112 ntBASIC0.32□□□□□ -2.36
SMSP52788 AC023932.2-201ENST00000603176 175 ntBASIC0.32□□□□□ -2.36
SMSP52788 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
SMSP52788 Y_RNA.7-201ENST00000362352 102 ntBASIC0.31□□□□□ -2.36
SMSP52788 Y_RNA.23-201ENST00000362496 106 ntBASIC0.31□□□□□ -2.36
SMSP52788 Y_RNA.433-201ENST00000384089 102 ntBASIC0.31□□□□□ -2.36
SMSP52788 SNORA1-201ENST00000384107 130 ntBASIC0.31□□□□□ -2.36
SMSP52788 Y_RNA.454-201ENST00000384224 113 ntBASIC0.31□□□□□ -2.36
SMSP52788 MIR518A1-201ENST00000385068 85 ntBASIC0.31□□□□□ -2.36
SMSP52788 RNU4-43P-201ENST00000410628 137 ntBASIC0.31□□□□□ -2.36
SMSP52788 SNORA40.8-201ENST00000411034 126 ntBASIC0.31□□□□□ -2.36
SMSP52788 Y_RNA.622-201ENST00000411091 108 ntBASIC0.31□□□□□ -2.36
SMSP52788 RNU6-448P-201ENST00000517052 107 ntBASIC0.31□□□□□ -2.36
SMSP52788 MIR302B-201ENST00000362188 73 ntBASIC0.3□□□□□ -2.36
SMSP52788 RNA5SP517-201ENST00000364724 117 ntBASIC0.3□□□□□ -2.36
SMSP52788 Y_RNA.280-201ENST00000364765 112 ntBASIC0.3□□□□□ -2.36
SMSP52788 Y_RNA.351-201ENST00000365436 96 ntBASIC0.3□□□□□ -2.36
SMSP52788 RNU6-381P-201ENST00000391259 108 ntBASIC0.3□□□□□ -2.36
SMSP52788 Y_RNA.618-201ENST00000410949 107 ntBASIC0.3□□□□□ -2.36
SMSP52788 AC108740.1-201ENST00000498629 225 ntBASIC0.3□□□□□ -2.36
SMSP52788 RNU6-453P-201ENST00000516819 85 ntBASIC0.3□□□□□ -2.36
SMSP52788 RNA5SP94-201ENST00000516917 108 ntBASIC0.3□□□□□ -2.36
SMSP52788 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.3□□□□□ -2.36
SMSP52788 MIR3152-201ENST00000579801 74 ntBASIC0.3□□□□□ -2.36
SMSP52788 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.3□□□□□ -2.36
SMSP52788 AL365205.2-201ENST00000594586 68 ntBASIC0.3□□□□□ -2.36
SMSP52788 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.3□□□□□ -2.36
SMSP52788 uc_338.16-201ENST00000621804 95 ntBASIC0.3□□□□□ -2.36
SMSP52788 Y_RNA.199-201ENST00000364014 102 ntBASIC0.29□□□□□ -2.36
SMSP52788 RNU6-1227P-201ENST00000383981 107 ntBASIC0.29□□□□□ -2.36
SMSP52788 RNU6-713P-201ENST00000384761 107 ntBASIC0.29□□□□□ -2.36
SMSP52788 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
SMSP52788 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.29□□□□□ -2.36
SMSP52788 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.29□□□□□ -2.36
SMSP52788 AC044792.1-201ENST00000593294 196 ntBASIC0.29□□□□□ -2.36
SMSP52788 AL365265.1-201ENST00000621045 234 ntBASIC0.29□□□□□ -2.36
SMSP52788 MIR376A2-201ENST00000636782 80 ntBASIC0.29□□□□□ -2.36
SMSP52788 U6.104-201ENST00000637979 90 ntBASIC0.29□□□□□ -2.36
SMSP52788 SNORD44.1-201ENST00000363202 61 ntBASIC0.28□□□□□ -2.36
SMSP52788 Y_RNA.422-201ENST00000384054 114 ntBASIC0.28□□□□□ -2.36
SMSP52788 Y_RNA.590-201ENST00000410140 107 ntBASIC0.28□□□□□ -2.36
SMSP52788 RNU6-651P-201ENST00000411040 105 ntBASIC0.28□□□□□ -2.36
SMSP52788 SNORD71-201ENST00000411292 86 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms