Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MIR8070-201ENST00000616510 88 ntBASIC1.11□□□□□ -2.23
CLCNKAP51800 MIR6516-201ENST00000630554 81 ntBASIC1.11□□□□□ -2.23
CLCNKAP51800 Y_RNA.251-201ENST00000364551 99 ntBASIC1.1□□□□□ -2.23
CLCNKAP51800 Y_RNA.454-201ENST00000384224 113 ntBASIC1.1□□□□□ -2.23
CLCNKAP51800 RNU6-125P-201ENST00000384505 107 ntBASIC1.1□□□□□ -2.23
CLCNKAP51800 Y_RNA.584-201ENST00000391090 114 ntBASIC1.1□□□□□ -2.23
CLCNKAP51800 RNU6-1212P-201ENST00000517023 104 ntBASIC1.1□□□□□ -2.23
CLCNKAP51800 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.1□□□□□ -2.23
CLCNKAP51800 RNU6-508P-201ENST00000363231 103 ntBASIC1.09□□□□□ -2.23
CLCNKAP51800 RNU4-16P-201ENST00000364737 141 ntBASIC1.09□□□□□ -2.23
CLCNKAP51800 SNORA80D-201ENST00000384488 135 ntBASIC1.09□□□□□ -2.23
CLCNKAP51800 RNU6-460P-201ENST00000391158 108 ntBASIC1.09□□□□□ -2.23
CLCNKAP51800 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
CLCNKAP51800 MIR1276-201ENST00000408707 83 ntBASIC1.09□□□□□ -2.23
CLCNKAP51800 RNU7-197P-201ENST00000458836 62 ntBASIC1.09□□□□□ -2.23
CLCNKAP51800 RNU7-21P-201ENST00000459430 62 ntBASIC1.09□□□□□ -2.23
CLCNKAP51800 Y_RNA.686-201ENST00000516548 134 ntBASIC1.09□□□□□ -2.23
CLCNKAP51800 MIR4295-201ENST00000585286 85 ntBASIC1.09□□□□□ -2.23
CLCNKAP51800 MIR8055-201ENST00000610739 97 ntBASIC1.09□□□□□ -2.23
CLCNKAP51800 SEPT14P17-201ENST00000617978 177 ntBASIC1.09□□□□□ -2.23
CLCNKAP51800 AC008163.1-202ENST00000636004 2889 ntBASIC1.08□□□□□ -2.24
CLCNKAP51800 RNU1-124P-201ENST00000363861 145 ntBASIC1.08□□□□□ -2.24
CLCNKAP51800 Y_RNA.215-201ENST00000364204 112 ntBASIC1.08□□□□□ -2.24
CLCNKAP51800 SNORA1.1-201ENST00000364671 133 ntBASIC1.08□□□□□ -2.24
CLCNKAP51800 RNU6-396P-201ENST00000365369 105 ntBASIC1.08□□□□□ -2.24
CLCNKAP51800 Y_RNA.400-201ENST00000383963 111 ntBASIC1.08□□□□□ -2.24
CLCNKAP51800 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
CLCNKAP51800 SNORA26.6-201ENST00000391256 115 ntBASIC1.08□□□□□ -2.24
CLCNKAP51800 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.08□□□□□ -2.24
CLCNKAP51800 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
CLCNKAP51800 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
CLCNKAP51800 RNU7-200P-201ENST00000516105 62 ntBASIC1.08□□□□□ -2.24
CLCNKAP51800 MIR2115-201ENST00000516657 100 ntBASIC1.08□□□□□ -2.24
CLCNKAP51800 AC023827.1-201ENST00000569247 97 ntBASIC1.08□□□□□ -2.24
CLCNKAP51800 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.08□□□□□ -2.24
CLCNKAP51800 AC027335.2-201ENST00000624030 375 ntBASIC1.08□□□□□ -2.24
CLCNKAP51800 Z97988.1-201ENST00000637697 135 ntBASIC1.08□□□□□ -2.24
CLCNKAP51800 SNORA20-201ENST00000384662 132 ntBASIC1.07□□□□□ -2.24
CLCNKAP51800 MIR569-201ENST00000385228 96 ntBASIC1.07□□□□□ -2.24
CLCNKAP51800 RNU6-205P-201ENST00000390858 107 ntBASIC1.07□□□□□ -2.24
CLCNKAP51800 MIR513C-201ENST00000401352 84 ntBASIC1.07□□□□□ -2.24
CLCNKAP51800 MRPL35P3-201ENST00000421557 364 ntBASIC1.07□□□□□ -2.24
CLCNKAP51800 RPS23P4-201ENST00000487908 423 ntBASIC1.07□□□□□ -2.24
CLCNKAP51800 RNA5SP272-201ENST00000516095 111 ntBASIC1.07□□□□□ -2.24
CLCNKAP51800 RNU6-346P-201ENST00000516288 111 ntBASIC1.07□□□□□ -2.24
CLCNKAP51800 RNU11-2P-201ENST00000516898 142 ntBASIC1.07□□□□□ -2.24
CLCNKAP51800 MIR548X2-201ENST00000579776 100 ntBASIC1.07□□□□□ -2.24
CLCNKAP51800 MIR6717-201ENST00000622747 73 ntBASIC1.07□□□□□ -2.24
CLCNKAP51800 RNU6-602P-201ENST00000411155 105 ntBASIC1.06□□□□□ -2.24
CLCNKAP51800 AC063976.4-201ENST00000421971 163 ntBASIC1.06□□□□□ -2.24
CLCNKAP51800 AC002429.1-201ENST00000437672 148 ntBASIC1.06□□□□□ -2.24
CLCNKAP51800 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.06□□□□□ -2.24
CLCNKAP51800 UBL5P1-201ENST00000507979 193 ntBASIC1.06□□□□□ -2.24
CLCNKAP51800 RNA5SP102-201ENST00000516865 106 ntBASIC1.06□□□□□ -2.24
CLCNKAP51800 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.06□□□□□ -2.24
CLCNKAP51800 MIR6504-201ENST00000613520 61 ntBASIC1.06□□□□□ -2.24
CLCNKAP51800 AC021613.1-201ENST00000623880 111 ntBASIC1.06□□□□□ -2.24
CLCNKAP51800 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.06□□□□□ -2.24
CLCNKAP51800 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
CLCNKAP51800 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CLCNKAP51800 Y_RNA.120-201ENST00000363304 110 ntBASIC1.05□□□□□ -2.24
CLCNKAP51800 RNY1P6-201ENST00000384193 109 ntBASIC1.05□□□□□ -2.24
CLCNKAP51800 SNORD12-201ENST00000391002 90 ntBASIC1.05□□□□□ -2.24
CLCNKAP51800 RNU6-613P-201ENST00000410412 108 ntBASIC1.05□□□□□ -2.24
CLCNKAP51800 AC244023.1-201ENST00000426884 112 ntBASIC1.05□□□□□ -2.24
CLCNKAP51800 RNU7-90P-201ENST00000459216 62 ntBASIC1.05□□□□□ -2.24
CLCNKAP51800 Y_RNA.651-201ENST00000459380 103 ntBASIC1.05□□□□□ -2.24
CLCNKAP51800 RNU6-426P-201ENST00000516464 97 ntBASIC1.05□□□□□ -2.24
CLCNKAP51800 Y_RNA.690-201ENST00000516603 95 ntBASIC1.05□□□□□ -2.24
CLCNKAP51800 AC242498.1-201ENST00000604134 111 ntBASIC1.05□□□□□ -2.24
CLCNKAP51800 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CLCNKAP51800 AL391516.1-201ENST00000554380 2449 ntBASIC1.05□□□□□ -2.24
CLCNKAP51800 RNU6-349P-201ENST00000362402 107 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 RNU6-309P-201ENST00000364573 106 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 RNU6-915P-201ENST00000364943 103 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 SNORA25.9-201ENST00000365087 128 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 SNORD18B-201ENST00000365659 72 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 Y_RNA.420-201ENST00000384043 110 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 Y_RNA.488-201ENST00000384403 102 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 Y_RNA.506-201ENST00000384494 102 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 SNORA2B-201ENST00000384583 137 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 SNORD38B-201ENST00000384690 67 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 MIR499A-201ENST00000384903 122 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 RNU6-1319P-201ENST00000390855 104 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 RNU6-747P-201ENST00000390928 104 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 RNU6-241P-201ENST00000391148 104 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 RNU6-177P-201ENST00000411257 104 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 RPS3AP1-201ENST00000413190 320 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 MTATP6P21-201ENST00000440681 189 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 RPS29P28-201ENST00000446439 141 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 RNU5E-3P-201ENST00000515913 68 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 AC036111.3-201ENST00000526389 112 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 SNORD38B-202ENST00000625943 69 ntBASIC1.04□□□□□ -2.24
CLCNKAP51800 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.04□□□□□ -2.24
CLCNKAP51800 SNORD12C-201ENST00000386307 89 ntBASIC1.03□□□□□ -2.24
CLCNKAP51800 MIR4661-201ENST00000582720 75 ntBASIC1.03□□□□□ -2.24
CLCNKAP51800 AP000753.3-201ENST00000604083 169 ntBASIC1.03□□□□□ -2.24
CLCNKAP51800 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
CLCNKAP51800 RNU6-94P-201ENST00000607728 107 ntBASIC1.03□□□□□ -2.24
CLCNKAP51800 MIR6841-201ENST00000637129 72 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms