Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.25□□□□□ -2.21
CLCN3P51790 TUG1_4.1-201ENST00000619464 181 ntBASIC1.25□□□□□ -2.21
CLCN3P51790 AC008133.2-201ENST00000624540 351 ntBASIC1.25□□□□□ -2.21
CLCN3P51790 AC132825.6-201ENST00000638861 357 ntBASIC1.25□□□□□ -2.21
CLCN3P51790 AL157777.2-201ENST00000258070 137 ntBASIC1.24□□□□□ -2.21
CLCN3P51790 Y_RNA.218-201ENST00000364218 104 ntBASIC1.24□□□□□ -2.21
CLCN3P51790 RNU6-959P-201ENST00000384671 107 ntBASIC1.24□□□□□ -2.21
CLCN3P51790 MIR520C-201ENST00000385005 87 ntBASIC1.24□□□□□ -2.21
CLCN3P51790 RNU6-913P-201ENST00000390913 95 ntBASIC1.24□□□□□ -2.21
CLCN3P51790 SNORA26.6-201ENST00000391256 115 ntBASIC1.24□□□□□ -2.21
CLCN3P51790 MIR1302-7-201ENST00000408841 72 ntBASIC1.24□□□□□ -2.21
CLCN3P51790 RNU7-80P-201ENST00000459562 61 ntBASIC1.24□□□□□ -2.21
CLCN3P51790 AL133373.1-201ENST00000497098 94 ntBASIC1.24□□□□□ -2.21
CLCN3P51790 Y_RNA.690-201ENST00000516603 95 ntBASIC1.24□□□□□ -2.21
CLCN3P51790 RNU6-113P-201ENST00000516653 101 ntBASIC1.24□□□□□ -2.21
CLCN3P51790 AC011603.4-201ENST00000611325 277 ntBASIC1.24□□□□□ -2.21
CLCN3P51790 RNA5SP48-201ENST00000363969 126 ntBASIC1.23□□□□□ -2.21
CLCN3P51790 SNORD114-22-201ENST00000365423 72 ntBASIC1.23□□□□□ -2.21
CLCN3P51790 Y_RNA.351-201ENST00000365436 96 ntBASIC1.23□□□□□ -2.21
CLCN3P51790 RNU6-1067P-201ENST00000384752 107 ntBASIC1.23□□□□□ -2.21
CLCN3P51790 MIR570-201ENST00000384917 97 ntBASIC1.23□□□□□ -2.21
CLCN3P51790 Y_RNA.617-201ENST00000410920 90 ntBASIC1.23□□□□□ -2.21
CLCN3P51790 MTATP6P21-201ENST00000440681 189 ntBASIC1.23□□□□□ -2.21
CLCN3P51790 SNORA31.2-201ENST00000516019 134 ntBASIC1.23□□□□□ -2.21
CLCN3P51790 RNU6-947P-201ENST00000516264 106 ntBASIC1.23□□□□□ -2.21
CLCN3P51790 MIR4295-201ENST00000585286 85 ntBASIC1.23□□□□□ -2.21
CLCN3P51790 AL022345.2-201ENST00000606307 135 ntBASIC1.23□□□□□ -2.21
CLCN3P51790 MIR8055-201ENST00000610739 97 ntBASIC1.23□□□□□ -2.21
CLCN3P51790 AC243994.1-201ENST00000618627 109 ntBASIC1.23□□□□□ -2.21
CLCN3P51790 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
CLCN3P51790 Y_RNA.191-201ENST00000363972 113 ntBASIC1.22□□□□□ -2.21
CLCN3P51790 Y_RNA.294-201ENST00000364916 102 ntBASIC1.22□□□□□ -2.21
CLCN3P51790 SNORA70.7-201ENST00000384159 133 ntBASIC1.22□□□□□ -2.21
CLCN3P51790 Y_RNA.454-201ENST00000384224 113 ntBASIC1.22□□□□□ -2.21
CLCN3P51790 SNORD12-201ENST00000391002 90 ntBASIC1.22□□□□□ -2.21
CLCN3P51790 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.22□□□□□ -2.21
CLCN3P51790 AL035398.1-201ENST00000430869 322 ntBASIC1.22□□□□□ -2.21
CLCN3P51790 Y_RNA.692-201ENST00000516627 105 ntBASIC1.22□□□□□ -2.21
CLCN3P51790 RNU6-971P-201ENST00000516920 106 ntBASIC1.22□□□□□ -2.21
CLCN3P51790 IGKV1-22-201ENST00000524313 326 ntBASIC1.22□□□□□ -2.21
CLCN3P51790 AC108081.1-201ENST00000604358 221 ntBASIC1.22□□□□□ -2.21
CLCN3P51790 MIR6841-201ENST00000637129 72 ntBASIC1.22□□□□□ -2.21
CLCN3P51790 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.21□□□□□ -2.22
CLCN3P51790 RNA5SP327-201ENST00000362494 101 ntBASIC1.21□□□□□ -2.22
CLCN3P51790 Y_RNA.114-201ENST00000363265 113 ntBASIC1.21□□□□□ -2.22
CLCN3P51790 MIR539-201ENST00000365690 78 ntBASIC1.21□□□□□ -2.22
CLCN3P51790 MIRLET7F2-201ENST00000385277 83 ntBASIC1.21□□□□□ -2.22
CLCN3P51790 AL158147.1-201ENST00000443970 75 ntBASIC1.21□□□□□ -2.22
CLCN3P51790 RNU2-11P-201ENST00000459191 187 ntBASIC1.21□□□□□ -2.22
CLCN3P51790 snoU13.16-201ENST00000459350 104 ntBASIC1.21□□□□□ -2.22
CLCN3P51790 AC107297.1-201ENST00000459991 176 ntBASIC1.21□□□□□ -2.22
CLCN3P51790 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
CLCN3P51790 AC048334.1-201ENST00000477975 159 ntBASIC1.21□□□□□ -2.22
CLCN3P51790 AC019288.1-201ENST00000557918 224 ntBASIC1.21□□□□□ -2.22
CLCN3P51790 MIR4452-201ENST00000583004 71 ntBASIC1.21□□□□□ -2.22
CLCN3P51790 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.21□□□□□ -2.22
CLCN3P51790 PRELID3BP2-201ENST00000605362 201 ntBASIC1.21□□□□□ -2.22
CLCN3P51790 AL020996.3-201ENST00000606617 222 ntBASIC1.21□□□□□ -2.22
CLCN3P51790 MIR6767-201ENST00000637302 66 ntBASIC1.21□□□□□ -2.22
CLCN3P51790 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CLCN3P51790 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CLCN3P51790 RNU1-133P-201ENST00000364867 167 ntBASIC1.2□□□□□ -2.22
CLCN3P51790 SNORD18B-201ENST00000365659 72 ntBASIC1.2□□□□□ -2.22
CLCN3P51790 RNY1P6-201ENST00000384193 109 ntBASIC1.2□□□□□ -2.22
CLCN3P51790 SNORA25-201ENST00000384384 134 ntBASIC1.2□□□□□ -2.22
CLCN3P51790 SNORA51.10-201ENST00000384418 136 ntBASIC1.2□□□□□ -2.22
CLCN3P51790 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CLCN3P51790 RNU6-1319P-201ENST00000390855 104 ntBASIC1.2□□□□□ -2.22
CLCN3P51790 RNU6-747P-201ENST00000390928 104 ntBASIC1.2□□□□□ -2.22
CLCN3P51790 RNU6-241P-201ENST00000391148 104 ntBASIC1.2□□□□□ -2.22
CLCN3P51790 RNU6-177P-201ENST00000411257 104 ntBASIC1.2□□□□□ -2.22
CLCN3P51790 AL591704.2-201ENST00000421658 181 ntBASIC1.2□□□□□ -2.22
CLCN3P51790 RNU7-53P-201ENST00000516705 60 ntBASIC1.2□□□□□ -2.22
CLCN3P51790 SNORA70.22-201ENST00000517160 124 ntBASIC1.2□□□□□ -2.22
CLCN3P51790 Z97988.1-201ENST00000637697 135 ntBASIC1.2□□□□□ -2.22
CLCN3P51790 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
CLCN3P51790 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CLCN3P51790 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CLCN3P51790 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
CLCN3P51790 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.19□□□□□ -2.22
CLCN3P51790 Y_RNA.71-201ENST00000362892 104 ntBASIC1.19□□□□□ -2.22
CLCN3P51790 RNU1-93P-201ENST00000364704 169 ntBASIC1.19□□□□□ -2.22
CLCN3P51790 Y_RNA.430-201ENST00000384081 110 ntBASIC1.19□□□□□ -2.22
CLCN3P51790 RNU6-80P-201ENST00000384195 107 ntBASIC1.19□□□□□ -2.22
CLCN3P51790 MIR618-201ENST00000385287 98 ntBASIC1.19□□□□□ -2.22
CLCN3P51790 RNU6-1190P-201ENST00000410811 104 ntBASIC1.19□□□□□ -2.22
CLCN3P51790 RNU6-659P-201ENST00000516454 104 ntBASIC1.19□□□□□ -2.22
CLCN3P51790 RNU6-958P-201ENST00000516995 106 ntBASIC1.19□□□□□ -2.22
CLCN3P51790 MIR548AO-201ENST00000579992 96 ntBASIC1.19□□□□□ -2.22
CLCN3P51790 AC027335.2-201ENST00000624030 375 ntBASIC1.19□□□□□ -2.22
CLCN3P51790 MIR4251-201ENST00000635819 61 ntBASIC1.19□□□□□ -2.22
CLCN3P51790 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
CLCN3P51790 SNORD116-14-201ENST00000383894 92 ntBASIC1.18□□□□□ -2.22
CLCN3P51790 SNORD116-17-201ENST00000383929 92 ntBASIC1.18□□□□□ -2.22
CLCN3P51790 SNORD116-15-201ENST00000384445 92 ntBASIC1.18□□□□□ -2.22
CLCN3P51790 SNORA80D-201ENST00000384488 135 ntBASIC1.18□□□□□ -2.22
CLCN3P51790 SNORD116-19-201ENST00000384729 92 ntBASIC1.18□□□□□ -2.22
CLCN3P51790 POLR2J4-204ENST00000418424 324 ntBASIC1.18□□□□□ -2.22
CLCN3P51790 Y_RNA.712-201ENST00000517011 92 ntBASIC1.18□□□□□ -2.22
CLCN3P51790 Y_RNA.757-201ENST00000578934 114 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms