Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 MTND5P41-201ENST00000517498 206 ntBASIC1.14□□□□□ -2.23
CENPAP49450 AP000753.3-201ENST00000604083 169 ntBASIC1.14□□□□□ -2.23
CENPAP49450 MIR8070-201ENST00000616510 88 ntBASIC1.14□□□□□ -2.23
CENPAP49450 AC027335.2-201ENST00000624030 375 ntBASIC1.14□□□□□ -2.23
CENPAP49450 RNU6-654P-201ENST00000364373 107 ntBASIC1.13□□□□□ -2.23
CENPAP49450 SNORA20-201ENST00000384662 132 ntBASIC1.13□□□□□ -2.23
CENPAP49450 SNORD38B-201ENST00000384690 67 ntBASIC1.13□□□□□ -2.23
CENPAP49450 MIR499A-201ENST00000384903 122 ntBASIC1.13□□□□□ -2.23
CENPAP49450 SNORD12-201ENST00000391002 90 ntBASIC1.13□□□□□ -2.23
CENPAP49450 AC063976.4-201ENST00000421971 163 ntBASIC1.13□□□□□ -2.23
CENPAP49450 SNORA25.12-201ENST00000516202 82 ntBASIC1.13□□□□□ -2.23
CENPAP49450 AC068338.1-201ENST00000565567 176 ntBASIC1.13□□□□□ -2.23
CENPAP49450 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.13□□□□□ -2.23
CENPAP49450 MIR3152-201ENST00000579801 74 ntBASIC1.13□□□□□ -2.23
CENPAP49450 MIR8055-201ENST00000610739 97 ntBASIC1.13□□□□□ -2.23
CENPAP49450 SNORD38B-202ENST00000625943 69 ntBASIC1.13□□□□□ -2.23
CENPAP49450 RNY1P11-201ENST00000363759 113 ntBASIC1.12□□□□□ -2.23
CENPAP49450 RNU6-392P-201ENST00000364926 101 ntBASIC1.12□□□□□ -2.23
CENPAP49450 SNORA40.6-201ENST00000391153 128 ntBASIC1.12□□□□□ -2.23
CENPAP49450 RNA5SP95-201ENST00000410319 137 ntBASIC1.12□□□□□ -2.23
CENPAP49450 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.12□□□□□ -2.23
CENPAP49450 RPS23P4-201ENST00000487908 423 ntBASIC1.12□□□□□ -2.23
CENPAP49450 AC023827.1-201ENST00000569247 97 ntBASIC1.12□□□□□ -2.23
CENPAP49450 MIR3660-201ENST00000584845 100 ntBASIC1.12□□□□□ -2.23
CENPAP49450 Z97988.1-201ENST00000637697 135 ntBASIC1.12□□□□□ -2.23
CENPAP49450 AL391516.1-201ENST00000554380 2449 ntBASIC1.12□□□□□ -2.23
CENPAP49450 RNU4-16P-201ENST00000364737 141 ntBASIC1.11□□□□□ -2.23
CENPAP49450 Y_RNA.400-201ENST00000383963 111 ntBASIC1.11□□□□□ -2.23
CENPAP49450 RNU6-125P-201ENST00000384505 107 ntBASIC1.11□□□□□ -2.23
CENPAP49450 SNORA2B-201ENST00000384583 137 ntBASIC1.11□□□□□ -2.23
CENPAP49450 RNU6-205P-201ENST00000390858 107 ntBASIC1.11□□□□□ -2.23
CENPAP49450 RPS3AP1-201ENST00000413190 320 ntBASIC1.11□□□□□ -2.23
CENPAP49450 AC002429.1-201ENST00000437672 148 ntBASIC1.11□□□□□ -2.23
CENPAP49450 RNU5E-3P-201ENST00000515913 68 ntBASIC1.11□□□□□ -2.23
CENPAP49450 MIR6717-201ENST00000622747 73 ntBASIC1.11□□□□□ -2.23
CENPAP49450 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CENPAP49450 Y_RNA.170-201ENST00000363746 110 ntBASIC1.1□□□□□ -2.23
CENPAP49450 SNORA25.9-201ENST00000365087 128 ntBASIC1.1□□□□□ -2.23
CENPAP49450 RNY1P6-201ENST00000384193 109 ntBASIC1.1□□□□□ -2.23
CENPAP49450 MIR548I1-201ENST00000408810 149 ntBASIC1.1□□□□□ -2.23
CENPAP49450 RNU6-613P-201ENST00000410412 108 ntBASIC1.1□□□□□ -2.23
CENPAP49450 AC004223.1-201ENST00000479840 271 ntBASIC1.1□□□□□ -2.23
CENPAP49450 UBL5P1-201ENST00000507979 193 ntBASIC1.1□□□□□ -2.23
CENPAP49450 MIR4421-201ENST00000578133 69 ntBASIC1.1□□□□□ -2.23
CENPAP49450 MIR548X2-201ENST00000579776 100 ntBASIC1.1□□□□□ -2.23
CENPAP49450 AL157834.3-201ENST00000615543 103 ntBASIC1.1□□□□□ -2.23
CENPAP49450 AC021613.1-201ENST00000623880 111 ntBASIC1.1□□□□□ -2.23
CENPAP49450 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.1□□□□□ -2.23
CENPAP49450 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
CENPAP49450 SNORA7.1-201ENST00000363750 139 ntBASIC1.09□□□□□ -2.23
CENPAP49450 Y_RNA.215-201ENST00000364204 112 ntBASIC1.09□□□□□ -2.23
CENPAP49450 Y_RNA.251-201ENST00000364551 99 ntBASIC1.09□□□□□ -2.23
CENPAP49450 Y_RNA.354-201ENST00000365448 111 ntBASIC1.09□□□□□ -2.23
CENPAP49450 SNORA22-201ENST00000383907 134 ntBASIC1.09□□□□□ -2.23
CENPAP49450 SNORA22C-201ENST00000384614 134 ntBASIC1.09□□□□□ -2.23
CENPAP49450 RNU6-1319P-201ENST00000390855 104 ntBASIC1.09□□□□□ -2.23
CENPAP49450 RNU6-747P-201ENST00000390928 104 ntBASIC1.09□□□□□ -2.23
CENPAP49450 RNU6-241P-201ENST00000391148 104 ntBASIC1.09□□□□□ -2.23
CENPAP49450 RNU6-460P-201ENST00000391158 108 ntBASIC1.09□□□□□ -2.23
CENPAP49450 RNU6-602P-201ENST00000411155 105 ntBASIC1.09□□□□□ -2.23
CENPAP49450 RNU6-177P-201ENST00000411257 104 ntBASIC1.09□□□□□ -2.23
CENPAP49450 RNA5SP236-201ENST00000516169 116 ntBASIC1.09□□□□□ -2.23
CENPAP49450 Y_RNA.686-201ENST00000516548 134 ntBASIC1.09□□□□□ -2.23
CENPAP49450 Y_RNA.690-201ENST00000516603 95 ntBASIC1.09□□□□□ -2.23
CENPAP49450 RNU6-255P-201ENST00000516957 105 ntBASIC1.09□□□□□ -2.23
CENPAP49450 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CENPAP49450 Y_RNA.120-201ENST00000363304 110 ntBASIC1.08□□□□□ -2.24
CENPAP49450 RNU1-124P-201ENST00000363861 145 ntBASIC1.08□□□□□ -2.24
CENPAP49450 SNORD113.3-201ENST00000364630 78 ntBASIC1.08□□□□□ -2.24
CENPAP49450 Y_RNA.327-201ENST00000365201 102 ntBASIC1.08□□□□□ -2.24
CENPAP49450 RNU6-690P-201ENST00000365242 106 ntBASIC1.08□□□□□ -2.24
CENPAP49450 Y_RNA.488-201ENST00000384403 102 ntBASIC1.08□□□□□ -2.24
CENPAP49450 MT-TN-201ENST00000387400 73 ntBASIC1.08□□□□□ -2.24
CENPAP49450 SNORA26.6-201ENST00000391256 115 ntBASIC1.08□□□□□ -2.24
CENPAP49450 RPS29P28-201ENST00000446439 141 ntBASIC1.08□□□□□ -2.24
CENPAP49450 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.08□□□□□ -2.24
CENPAP49450 MIR4264-201ENST00000583520 66 ntBASIC1.08□□□□□ -2.24
CENPAP49450 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.08□□□□□ -2.24
CENPAP49450 RNU6-994P-201ENST00000410507 111 ntBASIC1.07□□□□□ -2.24
CENPAP49450 AC244023.1-201ENST00000426884 112 ntBASIC1.07□□□□□ -2.24
CENPAP49450 SNORD124-201ENST00000459577 104 ntBASIC1.07□□□□□ -2.24
CENPAP49450 RNU7-200P-201ENST00000516105 62 ntBASIC1.07□□□□□ -2.24
CENPAP49450 RNU6-1212P-201ENST00000517023 104 ntBASIC1.07□□□□□ -2.24
CENPAP49450 RNU2-60P-201ENST00000517290 128 ntBASIC1.07□□□□□ -2.24
CENPAP49450 AC036111.3-201ENST00000526389 112 ntBASIC1.07□□□□□ -2.24
CENPAP49450 AC242498.1-201ENST00000604134 111 ntBASIC1.07□□□□□ -2.24
CENPAP49450 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.07□□□□□ -2.24
CENPAP49450 SNORA22.1-201ENST00000362701 134 ntBASIC1.06□□□□□ -2.24
CENPAP49450 RNU6-309P-201ENST00000364573 106 ntBASIC1.06□□□□□ -2.24
CENPAP49450 AL603914.1-201ENST00000401964 204 ntBASIC1.06□□□□□ -2.24
CENPAP49450 SNORD111-201ENST00000408139 94 ntBASIC1.06□□□□□ -2.24
CENPAP49450 RNU7-197P-201ENST00000458836 62 ntBASIC1.06□□□□□ -2.24
CENPAP49450 RNU7-62P-201ENST00000458856 62 ntBASIC1.06□□□□□ -2.24
CENPAP49450 RNU6-94P-201ENST00000607728 107 ntBASIC1.06□□□□□ -2.24
CENPAP49450 AC106800.4-201ENST00000614905 153 ntBASIC1.06□□□□□ -2.24
CENPAP49450 RNU6-508P-201ENST00000363231 103 ntBASIC1.05□□□□□ -2.24
CENPAP49450 Y_RNA.168-201ENST00000363740 102 ntBASIC1.05□□□□□ -2.24
CENPAP49450 RNU6-1187P-201ENST00000364771 110 ntBASIC1.05□□□□□ -2.24
CENPAP49450 RNU6-915P-201ENST00000364943 103 ntBASIC1.05□□□□□ -2.24
CENPAP49450 Y_RNA.420-201ENST00000384043 110 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 288.2 ms