Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 NAMPTP3-201ENST00000569273 224 ntBASIC-0.63□□□□□ -2.51
RPL28P46779 MIR5690-201ENST00000583739 73 ntBASIC-0.63□□□□□ -2.51
RPL28P46779 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.63□□□□□ -2.51
RPL28P46779 U4.5-201ENST00000617137 123 ntBASIC-0.63□□□□□ -2.51
RPL28P46779 MIR4272-201ENST00000635924 64 ntBASIC-0.63□□□□□ -2.51
RPL28P46779 RNU4-58P-201ENST00000363192 141 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 RNU6-480P-201ENST00000384332 107 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 MIR559-201ENST00000385188 96 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
RPL28P46779 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.64□□□□□ -2.51
RPL28P46779 SNORD110-201ENST00000408189 75 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 MTND1P14-201ENST00000427400 950 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 MTND4P17-201ENST00000470444 350 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 SEPT14P8-201ENST00000508026 178 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 SNORA25.13-201ENST00000516395 103 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 RNU6-764P-201ENST00000516396 105 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 RNU7-30P-201ENST00000516835 62 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 RN7SL660P-201ENST00000614852 299 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 AC022079.1-201ENST00000621546 602 ntBASIC-0.64□□□□□ -2.51
RPL28P46779 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.65□□□□□ -2.51
RPL28P46779 RNU6-490P-201ENST00000362985 107 ntBASIC-0.65□□□□□ -2.51
RPL28P46779 RNU6-865P-201ENST00000364772 107 ntBASIC-0.65□□□□□ -2.51
RPL28P46779 U8.6-201ENST00000364939 135 ntBASIC-0.65□□□□□ -2.51
RPL28P46779 SNORA18-201ENST00000384416 132 ntBASIC-0.65□□□□□ -2.51
RPL28P46779 MIR604-201ENST00000384880 94 ntBASIC-0.65□□□□□ -2.51
RPL28P46779 MIR516B1-201ENST00000385211 90 ntBASIC-0.65□□□□□ -2.51
RPL28P46779 AC006210.1-201ENST00000424882 111 ntBASIC-0.65□□□□□ -2.51
RPL28P46779 RNU7-80P-201ENST00000459562 61 ntBASIC-0.65□□□□□ -2.51
RPL28P46779 DEFB131E-201ENST00000532329 154 ntBASIC-0.65□□□□□ -2.51
RPL28P46779 SNORD113-5-201ENST00000607261 78 ntBASIC-0.65□□□□□ -2.51
RPL28P46779 AL391099.1-201ENST00000624635 187 ntBASIC-0.65□□□□□ -2.51
RPL28P46779 MIR376A2-201ENST00000636782 80 ntBASIC-0.65□□□□□ -2.51
RPL28P46779 SNORA22.1-201ENST00000362701 134 ntBASIC-0.66□□□□□ -2.52
RPL28P46779 RNU4-73P-201ENST00000363164 141 ntBASIC-0.66□□□□□ -2.52
RPL28P46779 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.66□□□□□ -2.52
RPL28P46779 SNORA25.7-201ENST00000364375 127 ntBASIC-0.66□□□□□ -2.52
RPL28P46779 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.66□□□□□ -2.52
RPL28P46779 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.66□□□□□ -2.52
RPL28P46779 MIR5692C2-201ENST00000577959 77 ntBASIC-0.66□□□□□ -2.52
RPL28P46779 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.66□□□□□ -2.52
RPL28P46779 C8orf59P2-201ENST00000603441 271 ntBASIC-0.66□□□□□ -2.52
RPL28P46779 AC091932.4-201ENST00000623386 200 ntBASIC-0.66□□□□□ -2.52
RPL28P46779 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.67□□□□□ -2.52
RPL28P46779 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.67□□□□□ -2.52
RPL28P46779 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.67□□□□□ -2.52
RPL28P46779 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.67□□□□□ -2.52
RPL28P46779 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.67□□□□□ -2.52
RPL28P46779 SNORA20-201ENST00000384662 132 ntBASIC-0.67□□□□□ -2.52
RPL28P46779 RNA5SP484-201ENST00000458857 111 ntBASIC-0.67□□□□□ -2.52
RPL28P46779 RNU6-758P-201ENST00000516292 89 ntBASIC-0.67□□□□□ -2.52
RPL28P46779 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.67□□□□□ -2.52
RPL28P46779 RNU6-699P-201ENST00000517081 110 ntBASIC-0.67□□□□□ -2.52
RPL28P46779 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.67□□□□□ -2.52
RPL28P46779 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.67□□□□□ -2.52
RPL28P46779 RNA5SP133-201ENST00000363368 119 ntBASIC-0.68□□□□□ -2.52
RPL28P46779 MIR526A2-201ENST00000390198 65 ntBASIC-0.68□□□□□ -2.52
RPL28P46779 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
RPL28P46779 Z95118.1-201ENST00000421372 247 ntBASIC-0.68□□□□□ -2.52
RPL28P46779 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.68□□□□□ -2.52
RPL28P46779 MRPS35P2-201ENST00000508242 191 ntBASIC-0.68□□□□□ -2.52
RPL28P46779 AL356055.1-201ENST00000602528 446 ntBASIC-0.68□□□□□ -2.52
RPL28P46779 AC002553.4-201ENST00000616896 331 ntBASIC-0.68□□□□□ -2.52
RPL28P46779 AC105081.1-201ENST00000617727 106 ntBASIC-0.68□□□□□ -2.52
RPL28P46779 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.69□□□□□ -2.52
RPL28P46779 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.69□□□□□ -2.52
RPL28P46779 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.69□□□□□ -2.52
RPL28P46779 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.69□□□□□ -2.52
RPL28P46779 RPS29P8-201ENST00000445109 171 ntBASIC-0.69□□□□□ -2.52
RPL28P46779 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.69□□□□□ -2.52
RPL28P46779 U8.20-201ENST00000459445 131 ntBASIC-0.69□□□□□ -2.52
RPL28P46779 MIR5688-201ENST00000580619 83 ntBASIC-0.69□□□□□ -2.52
RPL28P46779 RPS29P30-201ENST00000600975 111 ntBASIC-0.69□□□□□ -2.52
RPL28P46779 AC097639.2-201ENST00000603159 172 ntBASIC-0.69□□□□□ -2.52
RPL28P46779 AC021613.1-201ENST00000623880 111 ntBASIC-0.69□□□□□ -2.52
RPL28P46779 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.7□□□□□ -2.52
RPL28P46779 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.7□□□□□ -2.52
RPL28P46779 RNU6-484P-201ENST00000384016 107 ntBASIC-0.7□□□□□ -2.52
RPL28P46779 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.7□□□□□ -2.52
RPL28P46779 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.7□□□□□ -2.52
RPL28P46779 MIR626-201ENST00000385032 94 ntBASIC-0.7□□□□□ -2.52
RPL28P46779 SNORD75.1-201ENST00000408373 60 ntBASIC-0.7□□□□□ -2.52
RPL28P46779 MIR1277-201ENST00000408536 78 ntBASIC-0.7□□□□□ -2.52
RPL28P46779 RNU2-55P-201ENST00000411146 174 ntBASIC-0.7□□□□□ -2.52
RPL28P46779 RNA5SP153-201ENST00000516498 76 ntBASIC-0.7□□□□□ -2.52
RPL28P46779 MIR5197-201ENST00000583721 112 ntBASIC-0.7□□□□□ -2.52
RPL28P46779 AC133104.2-201ENST00000615272 193 ntBASIC-0.7□□□□□ -2.52
RPL28P46779 U6.109-201ENST00000636749 87 ntBASIC-0.7□□□□□ -2.52
RPL28P46779 MTND5P32-201ENST00000560711 1802 ntBASIC-0.71□□□□□ -2.52
RPL28P46779 SNORD114-14-201ENST00000362723 75 ntBASIC-0.71□□□□□ -2.52
RPL28P46779 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.71□□□□□ -2.52
RPL28P46779 RNU6-509P-201ENST00000363519 107 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms