Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC004812.1-201ENST00000540773 146 ntBASIC1.98□□□□□ -2.09
LTBRP36941 AL513534.2-201ENST00000603836 250 ntBASIC1.98□□□□□ -2.09
LTBRP36941 MIR8063-201ENST00000621930 81 ntBASIC1.98□□□□□ -2.09
LTBRP36941 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.98□□□□□ -2.09
LTBRP36941 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
LTBRP36941 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
LTBRP36941 RNU6-153P-201ENST00000364422 104 ntBASIC1.97□□□□□ -2.09
LTBRP36941 SNORD12C-201ENST00000386307 89 ntBASIC1.97□□□□□ -2.09
LTBRP36941 SNORD41-201ENST00000386967 70 ntBASIC1.97□□□□□ -2.09
LTBRP36941 RNU7-113P-201ENST00000459273 62 ntBASIC1.97□□□□□ -2.09
LTBRP36941 RNU7-41P-201ENST00000515917 61 ntBASIC1.97□□□□□ -2.09
LTBRP36941 SNORD111.1-201ENST00000516421 86 ntBASIC1.97□□□□□ -2.09
LTBRP36941 RNU6-412P-201ENST00000516434 106 ntBASIC1.97□□□□□ -2.09
LTBRP36941 MIR3163-201ENST00000581592 73 ntBASIC1.97□□□□□ -2.09
LTBRP36941 MIR4251-201ENST00000635819 61 ntBASIC1.97□□□□□ -2.09
LTBRP36941 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
LTBRP36941 Y_RNA.281-201ENST00000364774 94 ntBASIC1.96□□□□□ -2.1
LTBRP36941 Y_RNA.531-201ENST00000384589 121 ntBASIC1.96□□□□□ -2.1
LTBRP36941 Y_RNA.549-201ENST00000384657 102 ntBASIC1.96□□□□□ -2.1
LTBRP36941 SNORA67.5-201ENST00000391036 107 ntBASIC1.96□□□□□ -2.1
LTBRP36941 snoU13.9-201ENST00000458927 103 ntBASIC1.96□□□□□ -2.1
LTBRP36941 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.96□□□□□ -2.1
LTBRP36941 AL627230.6-201ENST00000611129 280 ntBASIC1.96□□□□□ -2.1
LTBRP36941 AL035470.1-201ENST00000622571 220 ntBASIC1.96□□□□□ -2.1
LTBRP36941 MIR6841-201ENST00000637129 72 ntBASIC1.96□□□□□ -2.1
LTBRP36941 SNORA63.5-201ENST00000363548 123 ntBASIC1.95□□□□□ -2.1
LTBRP36941 RNU6-755P-201ENST00000364400 103 ntBASIC1.95□□□□□ -2.1
LTBRP36941 SNORA1.1-201ENST00000364671 133 ntBASIC1.95□□□□□ -2.1
LTBRP36941 AC005908.1-201ENST00000468701 347 ntBASIC1.95□□□□□ -2.1
LTBRP36941 MIR514B-201ENST00000516774 80 ntBASIC1.95□□□□□ -2.1
LTBRP36941 RNU6-1258P-201ENST00000516911 111 ntBASIC1.95□□□□□ -2.1
LTBRP36941 MIR4679-2-201ENST00000578358 77 ntBASIC1.95□□□□□ -2.1
LTBRP36941 MIR4255-201ENST00000579351 72 ntBASIC1.95□□□□□ -2.1
LTBRP36941 AL137847.3-201ENST00000611521 109 ntBASIC1.95□□□□□ -2.1
LTBRP36941 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
LTBRP36941 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LTBRP36941 Y_RNA.224-201ENST00000364308 111 ntBASIC1.94□□□□□ -2.1
LTBRP36941 RNU6-1107P-201ENST00000364817 104 ntBASIC1.94□□□□□ -2.1
LTBRP36941 Y_RNA.362-201ENST00000365518 110 ntBASIC1.94□□□□□ -2.1
LTBRP36941 Y_RNA.430-201ENST00000384081 110 ntBASIC1.94□□□□□ -2.1
LTBRP36941 MIR548D2-201ENST00000384955 97 ntBASIC1.94□□□□□ -2.1
LTBRP36941 MIR30A-201ENST00000385092 71 ntBASIC1.94□□□□□ -2.1
LTBRP36941 RPS3AP1-201ENST00000413190 320 ntBASIC1.94□□□□□ -2.1
LTBRP36941 HSPE1P24-201ENST00000450782 238 ntBASIC1.94□□□□□ -2.1
LTBRP36941 RNU7-95P-201ENST00000459222 64 ntBASIC1.94□□□□□ -2.1
LTBRP36941 AC104435.1-201ENST00000483483 166 ntBASIC1.94□□□□□ -2.1
LTBRP36941 RNU7-6P-201ENST00000516845 62 ntBASIC1.94□□□□□ -2.1
LTBRP36941 SNORA44.1-201ENST00000517031 108 ntBASIC1.94□□□□□ -2.1
LTBRP36941 BX248123.2-201ENST00000606318 124 ntBASIC1.94□□□□□ -2.1
LTBRP36941 MIR8055-201ENST00000610739 97 ntBASIC1.94□□□□□ -2.1
LTBRP36941 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LTBRP36941 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.94□□□□□ -2.1
LTBRP36941 AL589743.1-201ENST00000551932 2712 ntBASIC1.93□□□□□ -2.1
LTBRP36941 Y_RNA.85-201ENST00000363014 111 ntBASIC1.93□□□□□ -2.1
LTBRP36941 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LTBRP36941 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
LTBRP36941 RPS23P4-201ENST00000487908 423 ntBASIC1.93□□□□□ -2.1
LTBRP36941 AC113410.1-201ENST00000505029 247 ntBASIC1.93□□□□□ -2.1
LTBRP36941 MIR548AO-201ENST00000579992 96 ntBASIC1.93□□□□□ -2.1
LTBRP36941 AL096840.1-201ENST00000603287 93 ntBASIC1.93□□□□□ -2.1
LTBRP36941 AL357312.1-201ENST00000603879 298 ntBASIC1.93□□□□□ -2.1
LTBRP36941 MIR1276-201ENST00000408707 83 ntBASIC1.92□□□□□ -2.1
LTBRP36941 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.92□□□□□ -2.1
LTBRP36941 GHRLOS.1-201ENST00000610995 70 ntBASIC1.92□□□□□ -2.1
LTBRP36941 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.92□□□□□ -2.1
LTBRP36941 Z97988.1-201ENST00000637697 135 ntBASIC1.92□□□□□ -2.1
LTBRP36941 RNA5SP48-201ENST00000363969 126 ntBASIC1.91□□□□□ -2.1
LTBRP36941 Y_RNA.299-201ENST00000364973 94 ntBASIC1.91□□□□□ -2.1
LTBRP36941 Y_RNA.344-201ENST00000365381 112 ntBASIC1.91□□□□□ -2.1
LTBRP36941 Y_RNA.470-201ENST00000384307 117 ntBASIC1.91□□□□□ -2.1
LTBRP36941 MIR676-201ENST00000390702 67 ntBASIC1.91□□□□□ -2.1
LTBRP36941 RNA5SP33-201ENST00000516687 98 ntBASIC1.91□□□□□ -2.1
LTBRP36941 CYP3A52P-201ENST00000563326 91 ntBASIC1.91□□□□□ -2.1
LTBRP36941 MIR3935-201ENST00000583472 104 ntBASIC1.91□□□□□ -2.1
LTBRP36941 MIR3192-201ENST00000584920 77 ntBASIC1.91□□□□□ -2.1
LTBRP36941 uc_338.28-201ENST00000612082 187 ntBASIC1.91□□□□□ -2.1
LTBRP36941 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LTBRP36941 SNORD115-2-201ENST00000362842 82 ntBASIC1.9□□□□□ -2.11
LTBRP36941 SNORD115-20-201ENST00000365099 82 ntBASIC1.9□□□□□ -2.11
LTBRP36941 RNU4-69P-201ENST00000410677 143 ntBASIC1.9□□□□□ -2.11
LTBRP36941 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.9□□□□□ -2.11
LTBRP36941 AC009474.2-201ENST00000451383 136 ntBASIC1.9□□□□□ -2.11
LTBRP36941 RNU6-947P-201ENST00000516264 106 ntBASIC1.9□□□□□ -2.11
LTBRP36941 AC019176.1-201ENST00000518519 225 ntBASIC1.9□□□□□ -2.11
LTBRP36941 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
LTBRP36941 SNORA4-201ENST00000584302 138 ntBASIC1.9□□□□□ -2.11
LTBRP36941 AL096861.1-201ENST00000610899 123 ntBASIC1.9□□□□□ -2.11
LTBRP36941 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LTBRP36941 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
LTBRP36941 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.9□□□□□ -2.11
LTBRP36941 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LTBRP36941 MIR302D-201ENST00000362275 68 ntBASIC1.89□□□□□ -2.11
LTBRP36941 Y_RNA.49-201ENST00000362714 112 ntBASIC1.89□□□□□ -2.11
LTBRP36941 SNORD1A-201ENST00000364968 72 ntBASIC1.89□□□□□ -2.11
LTBRP36941 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.89□□□□□ -2.11
LTBRP36941 MIR548AE2-201ENST00000583456 67 ntBASIC1.89□□□□□ -2.11
LTBRP36941 AC087741.2-201ENST00000619415 172 ntBASIC1.89□□□□□ -2.11
LTBRP36941 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.89□□□□□ -2.11
LTBRP36941 RNA5SP160-201ENST00000364866 120 ntBASIC1.88□□□□□ -2.11
LTBRP36941 Y_RNA.354-201ENST00000365448 111 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms