Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC006441.5-201ENST00000612680 209 ntBASIC1.3□□□□□ -2.2
KRT9P35527 AC134878.1-201ENST00000619901 243 ntBASIC1.3□□□□□ -2.2
KRT9P35527 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.29□□□□□ -2.2
KRT9P35527 RNU6-834P-201ENST00000362367 110 ntBASIC1.29□□□□□ -2.2
KRT9P35527 Y_RNA.81-201ENST00000362997 102 ntBASIC1.29□□□□□ -2.2
KRT9P35527 SNORD114-27-201ENST00000363766 70 ntBASIC1.29□□□□□ -2.2
KRT9P35527 RNU6-268P-201ENST00000364174 107 ntBASIC1.29□□□□□ -2.2
KRT9P35527 RNU6-1056P-201ENST00000383996 107 ntBASIC1.29□□□□□ -2.2
KRT9P35527 SNORD20-201ENST00000384550 80 ntBASIC1.29□□□□□ -2.2
KRT9P35527 SNORD77.3-201ENST00000391113 65 ntBASIC1.29□□□□□ -2.2
KRT9P35527 MIR548O-201ENST00000408583 114 ntBASIC1.29□□□□□ -2.2
KRT9P35527 snoU13.18-201ENST00000459483 104 ntBASIC1.29□□□□□ -2.2
KRT9P35527 RNU6-1061P-201ENST00000516530 99 ntBASIC1.29□□□□□ -2.2
KRT9P35527 MIR3192-201ENST00000584920 77 ntBASIC1.29□□□□□ -2.2
KRT9P35527 AL078603.1-201ENST00000603824 313 ntBASIC1.29□□□□□ -2.2
KRT9P35527 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRT9P35527 MTND5P32-201ENST00000560711 1802 ntBASIC1.29□□□□□ -2.2
KRT9P35527 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
KRT9P35527 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
KRT9P35527 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
KRT9P35527 SNORD115-28-201ENST00000363931 81 ntBASIC1.28□□□□□ -2.2
KRT9P35527 RNU6-53P-201ENST00000365367 106 ntBASIC1.28□□□□□ -2.2
KRT9P35527 Y_RNA.410-201ENST00000383992 113 ntBASIC1.28□□□□□ -2.2
KRT9P35527 Y_RNA.563-201ENST00000384707 108 ntBASIC1.28□□□□□ -2.2
KRT9P35527 MIR518F-201ENST00000384973 87 ntBASIC1.28□□□□□ -2.2
KRT9P35527 snoU13.25-201ENST00000458945 104 ntBASIC1.28□□□□□ -2.2
KRT9P35527 SNORD79.1-201ENST00000516069 84 ntBASIC1.28□□□□□ -2.2
KRT9P35527 RNA5SP102-201ENST00000516865 106 ntBASIC1.28□□□□□ -2.2
KRT9P35527 SNORA18.7-201ENST00000516910 131 ntBASIC1.28□□□□□ -2.2
KRT9P35527 RNU7-70P-201ENST00000516941 66 ntBASIC1.28□□□□□ -2.2
KRT9P35527 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.28□□□□□ -2.2
KRT9P35527 RNU6-508P-201ENST00000363231 103 ntBASIC1.27□□□□□ -2.21
KRT9P35527 RNU1-124P-201ENST00000363861 145 ntBASIC1.27□□□□□ -2.21
KRT9P35527 RNU6-1325P-201ENST00000364905 105 ntBASIC1.27□□□□□ -2.21
KRT9P35527 SNORD114-22-201ENST00000365423 72 ntBASIC1.27□□□□□ -2.21
KRT9P35527 RNU6-1189P-201ENST00000383958 107 ntBASIC1.27□□□□□ -2.21
KRT9P35527 SNORA70.7-201ENST00000384159 133 ntBASIC1.27□□□□□ -2.21
KRT9P35527 SNORD38C-201ENST00000384381 69 ntBASIC1.27□□□□□ -2.21
KRT9P35527 Y_RNA.525-201ENST00000384570 113 ntBASIC1.27□□□□□ -2.21
KRT9P35527 Y_RNA.547-201ENST00000384654 119 ntBASIC1.27□□□□□ -2.21
KRT9P35527 MIR548A2-201ENST00000384956 97 ntBASIC1.27□□□□□ -2.21
KRT9P35527 MIR7-2-201ENST00000384970 110 ntBASIC1.27□□□□□ -2.21
KRT9P35527 MIR520C-201ENST00000385005 87 ntBASIC1.27□□□□□ -2.21
KRT9P35527 SNORD12-201ENST00000391002 90 ntBASIC1.27□□□□□ -2.21
KRT9P35527 MIR1285-1-201ENST00000408593 84 ntBASIC1.27□□□□□ -2.21
KRT9P35527 RNU6-1064P-201ENST00000410626 104 ntBASIC1.27□□□□□ -2.21
KRT9P35527 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.27□□□□□ -2.21
KRT9P35527 RNU7-25P-201ENST00000516544 62 ntBASIC1.27□□□□□ -2.21
KRT9P35527 RNU6-1149P-201ENST00000516810 97 ntBASIC1.27□□□□□ -2.21
KRT9P35527 Y_RNA.712-201ENST00000517011 92 ntBASIC1.27□□□□□ -2.21
KRT9P35527 RNU2-60P-201ENST00000517290 128 ntBASIC1.27□□□□□ -2.21
KRT9P35527 U6.95-201ENST00000636931 70 ntBASIC1.27□□□□□ -2.21
KRT9P35527 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
KRT9P35527 Y_RNA.37-201ENST00000362606 108 ntBASIC1.26□□□□□ -2.21
KRT9P35527 Y_RNA.191-201ENST00000363972 113 ntBASIC1.26□□□□□ -2.21
KRT9P35527 RNU6-215P-201ENST00000365169 102 ntBASIC1.26□□□□□ -2.21
KRT9P35527 SNORA80D-201ENST00000384488 135 ntBASIC1.26□□□□□ -2.21
KRT9P35527 AL035461.1-201ENST00000421490 332 ntBASIC1.26□□□□□ -2.21
KRT9P35527 AL591704.2-201ENST00000421658 181 ntBASIC1.26□□□□□ -2.21
KRT9P35527 RPS23P4-201ENST00000487908 423 ntBASIC1.26□□□□□ -2.21
KRT9P35527 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.26□□□□□ -2.21
KRT9P35527 RNU6-772P-201ENST00000516042 105 ntBASIC1.26□□□□□ -2.21
KRT9P35527 RNU6-919P-201ENST00000516731 104 ntBASIC1.26□□□□□ -2.21
KRT9P35527 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.26□□□□□ -2.21
KRT9P35527 AC015726.2-201ENST00000620112 122 ntBASIC1.26□□□□□ -2.21
KRT9P35527 MIR3914-2-201ENST00000637339 95 ntBASIC1.26□□□□□ -2.21
KRT9P35527 AL442644.1-201ENST00000454390 3105 ntBASIC1.26□□□□□ -2.21
KRT9P35527 MIR96-201ENST00000362288 78 ntBASIC1.25□□□□□ -2.21
KRT9P35527 Y_RNA.280-201ENST00000364765 112 ntBASIC1.25□□□□□ -2.21
KRT9P35527 RNU6-476P-201ENST00000384726 107 ntBASIC1.25□□□□□ -2.21
KRT9P35527 SNORA40.5-201ENST00000391061 128 ntBASIC1.25□□□□□ -2.21
KRT9P35527 AC063976.4-201ENST00000421971 163 ntBASIC1.25□□□□□ -2.21
KRT9P35527 SNRPGP14-201ENST00000435400 219 ntBASIC1.25□□□□□ -2.21
KRT9P35527 AC087499.4-201ENST00000448505 178 ntBASIC1.25□□□□□ -2.21
KRT9P35527 SNORD123-201ENST00000459473 70 ntBASIC1.25□□□□□ -2.21
KRT9P35527 RN7SKP19-201ENST00000516016 252 ntBASIC1.25□□□□□ -2.21
KRT9P35527 RNU6-113P-201ENST00000516653 101 ntBASIC1.25□□□□□ -2.21
KRT9P35527 MTND5P34-201ENST00000568888 325 ntBASIC1.25□□□□□ -2.21
KRT9P35527 MIR4764-201ENST00000580680 88 ntBASIC1.25□□□□□ -2.21
KRT9P35527 MIR4452-201ENST00000583004 71 ntBASIC1.25□□□□□ -2.21
KRT9P35527 MIR5197-201ENST00000583721 112 ntBASIC1.25□□□□□ -2.21
KRT9P35527 PRELID3BP2-201ENST00000605362 201 ntBASIC1.25□□□□□ -2.21
KRT9P35527 MIR6504-201ENST00000613520 61 ntBASIC1.25□□□□□ -2.21
KRT9P35527 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRT9P35527 Y_RNA.346-201ENST00000365385 112 ntBASIC1.24□□□□□ -2.21
KRT9P35527 MIR19B1-201ENST00000384829 87 ntBASIC1.24□□□□□ -2.21
KRT9P35527 Y_RNA.617-201ENST00000410920 90 ntBASIC1.24□□□□□ -2.21
KRT9P35527 Y_RNA.651-201ENST00000459380 103 ntBASIC1.24□□□□□ -2.21
KRT9P35527 RPS26P48-201ENST00000491713 339 ntBASIC1.24□□□□□ -2.21
KRT9P35527 RNU7-41P-201ENST00000515917 61 ntBASIC1.24□□□□□ -2.21
KRT9P35527 RNA5SP236-201ENST00000516169 116 ntBASIC1.24□□□□□ -2.21
KRT9P35527 RNU7-43P-201ENST00000516554 64 ntBASIC1.24□□□□□ -2.21
KRT9P35527 SCARNA15-202ENST00000516881 127 ntBASIC1.24□□□□□ -2.21
KRT9P35527 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.24□□□□□ -2.21
KRT9P35527 AC025166.1-201ENST00000612411 163 ntBASIC1.24□□□□□ -2.21
KRT9P35527 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRT9P35527 AL391516.1-201ENST00000554380 2449 ntBASIC1.23□□□□□ -2.21
KRT9P35527 SNORD58C-201ENST00000365223 64 ntBASIC1.23□□□□□ -2.21
KRT9P35527 Y_RNA.351-201ENST00000365436 96 ntBASIC1.23□□□□□ -2.21
KRT9P35527 RNU6-44P-201ENST00000384045 107 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms