Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RNU7-96P-201ENST00000459535 64 ntBASIC0.26□□□□□ -2.37
RFC4P35249 RNU6-998P-201ENST00000515894 101 ntBASIC0.26□□□□□ -2.37
RFC4P35249 RNU6-570P-201ENST00000517051 105 ntBASIC0.26□□□□□ -2.37
RFC4P35249 RNU6-1137P-201ENST00000517073 99 ntBASIC0.26□□□□□ -2.37
RFC4P35249 MIR5688-201ENST00000580619 83 ntBASIC0.26□□□□□ -2.37
RFC4P35249 MIR4680-201ENST00000580906 66 ntBASIC0.26□□□□□ -2.37
RFC4P35249 MIR30D-201ENST00000362283 70 ntBASIC0.25□□□□□ -2.37
RFC4P35249 Y_RNA.152-201ENST00000363578 100 ntBASIC0.25□□□□□ -2.37
RFC4P35249 Y_RNA.274-201ENST00000364714 101 ntBASIC0.25□□□□□ -2.37
RFC4P35249 Y_RNA.276-201ENST00000364732 109 ntBASIC0.25□□□□□ -2.37
RFC4P35249 Y_RNA.304-201ENST00000365011 112 ntBASIC0.25□□□□□ -2.37
RFC4P35249 RNU6-1189P-201ENST00000383958 107 ntBASIC0.25□□□□□ -2.37
RFC4P35249 RNU6-484P-201ENST00000384016 107 ntBASIC0.25□□□□□ -2.37
RFC4P35249 Y_RNA.440-201ENST00000384120 114 ntBASIC0.25□□□□□ -2.37
RFC4P35249 Y_RNA.476-201ENST00000384347 108 ntBASIC0.25□□□□□ -2.37
RFC4P35249 MIR548P-201ENST00000408336 84 ntBASIC0.25□□□□□ -2.37
RFC4P35249 RNU6-651P-201ENST00000411040 105 ntBASIC0.25□□□□□ -2.37
RFC4P35249 RNU6-126P-201ENST00000516685 103 ntBASIC0.25□□□□□ -2.37
RFC4P35249 RNU6-453P-201ENST00000516819 85 ntBASIC0.25□□□□□ -2.37
RFC4P35249 MIR3171-201ENST00000584270 74 ntBASIC0.25□□□□□ -2.37
RFC4P35249 SNORD92-201ENST00000585078 85 ntBASIC0.25□□□□□ -2.37
RFC4P35249 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
RFC4P35249 Y_RNA.275-201ENST00000364726 110 ntBASIC0.24□□□□□ -2.37
RFC4P35249 SNORA1-201ENST00000384107 130 ntBASIC0.24□□□□□ -2.37
RFC4P35249 MIR329-2-201ENST00000385029 84 ntBASIC0.24□□□□□ -2.37
RFC4P35249 MIR563-201ENST00000385080 79 ntBASIC0.24□□□□□ -2.37
RFC4P35249 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.24□□□□□ -2.37
RFC4P35249 TRBVB-201ENST00000477100 408 ntBASIC0.24□□□□□ -2.37
RFC4P35249 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.24□□□□□ -2.37
RFC4P35249 RNA5SP94-201ENST00000516917 108 ntBASIC0.24□□□□□ -2.37
RFC4P35249 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.24□□□□□ -2.37
RFC4P35249 MIR3678-201ENST00000578455 94 ntBASIC0.24□□□□□ -2.37
RFC4P35249 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.24□□□□□ -2.37
RFC4P35249 MIR5190-201ENST00000581537 80 ntBASIC0.24□□□□□ -2.37
RFC4P35249 SNORA25.18-201ENST00000607153 114 ntBASIC0.24□□□□□ -2.37
RFC4P35249 MIR302B-201ENST00000362188 73 ntBASIC0.23□□□□□ -2.37
RFC4P35249 SNORD44.1-201ENST00000363202 61 ntBASIC0.23□□□□□ -2.37
RFC4P35249 Y_RNA.294-201ENST00000364916 102 ntBASIC0.23□□□□□ -2.37
RFC4P35249 RNA5SP117-201ENST00000365294 118 ntBASIC0.23□□□□□ -2.37
RFC4P35249 Y_RNA.351-201ENST00000365436 96 ntBASIC0.23□□□□□ -2.37
RFC4P35249 MIR518A1-201ENST00000385068 85 ntBASIC0.23□□□□□ -2.37
RFC4P35249 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.23□□□□□ -2.37
RFC4P35249 SNORA26-201ENST00000391286 122 ntBASIC0.23□□□□□ -2.37
RFC4P35249 RNU6-1203P-201ENST00000410703 110 ntBASIC0.23□□□□□ -2.37
RFC4P35249 SNORA40.8-201ENST00000411034 126 ntBASIC0.23□□□□□ -2.37
RFC4P35249 HAR1A.1-201ENST00000459583 118 ntBASIC0.23□□□□□ -2.37
RFC4P35249 RNU6-1143P-201ENST00000516125 104 ntBASIC0.23□□□□□ -2.37
RFC4P35249 AC020661.2-201ENST00000560114 134 ntBASIC0.23□□□□□ -2.37
RFC4P35249 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
RFC4P35249 AP001282.2-201ENST00000616149 309 ntBASIC0.23□□□□□ -2.37
RFC4P35249 MIR6717-201ENST00000622747 73 ntBASIC0.23□□□□□ -2.37
RFC4P35249 MIR376A2-201ENST00000636782 80 ntBASIC0.23□□□□□ -2.37
RFC4P35249 MIR6759-201ENST00000638110 65 ntBASIC0.23□□□□□ -2.37
RFC4P35249 RNU6-349P-201ENST00000362402 107 ntBASIC0.22□□□□□ -2.37
RFC4P35249 Y_RNA.199-201ENST00000364014 102 ntBASIC0.22□□□□□ -2.37
RFC4P35249 snoU2_19.4-201ENST00000364329 80 ntBASIC0.22□□□□□ -2.37
RFC4P35249 RNU6-740P-201ENST00000364734 105 ntBASIC0.22□□□□□ -2.37
RFC4P35249 RNU6-597P-201ENST00000365620 102 ntBASIC0.22□□□□□ -2.37
RFC4P35249 Y_RNA.410-201ENST00000383992 113 ntBASIC0.22□□□□□ -2.37
RFC4P35249 Y_RNA.432-201ENST00000384087 111 ntBASIC0.22□□□□□ -2.37
RFC4P35249 Y_RNA.535-201ENST00000384612 99 ntBASIC0.22□□□□□ -2.37
RFC4P35249 SNORA26.6-201ENST00000391256 115 ntBASIC0.22□□□□□ -2.37
RFC4P35249 AL606845.1-201ENST00000404881 255 ntBASIC0.22□□□□□ -2.37
RFC4P35249 SNORD93-201ENST00000408813 74 ntBASIC0.22□□□□□ -2.37
RFC4P35249 Y_RNA.23-201ENST00000362496 106 ntBASIC0.21□□□□□ -2.38
RFC4P35249 Y_RNA.61-201ENST00000362835 102 ntBASIC0.21□□□□□ -2.38
RFC4P35249 RNU5E-4P-201ENST00000364931 120 ntBASIC0.21□□□□□ -2.38
RFC4P35249 MT-TF-201ENST00000387314 71 ntBASIC0.21□□□□□ -2.38
RFC4P35249 Y_RNA.617-201ENST00000410920 90 ntBASIC0.21□□□□□ -2.38
RFC4P35249 RNU2-55P-201ENST00000411146 174 ntBASIC0.21□□□□□ -2.38
RFC4P35249 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.21□□□□□ -2.38
RFC4P35249 SNRPGP12-201ENST00000449481 213 ntBASIC0.21□□□□□ -2.38
RFC4P35249 RNU6-448P-201ENST00000517052 107 ntBASIC0.21□□□□□ -2.38
RFC4P35249 AC022523.2-201ENST00000561045 150 ntBASIC0.21□□□□□ -2.38
RFC4P35249 Y_RNA.44-201ENST00000362676 108 ntBASIC0.2□□□□□ -2.38
RFC4P35249 RNU6-867P-201ENST00000364956 107 ntBASIC0.2□□□□□ -2.38
RFC4P35249 Y_RNA.567-201ENST00000384736 106 ntBASIC0.2□□□□□ -2.38
RFC4P35249 SNORD71-201ENST00000411292 86 ntBASIC0.2□□□□□ -2.38
RFC4P35249 AC113618.1-201ENST00000416747 285 ntBASIC0.2□□□□□ -2.38
RFC4P35249 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
RFC4P35249 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.2□□□□□ -2.38
RFC4P35249 RNA5SP153-201ENST00000516498 76 ntBASIC0.2□□□□□ -2.38
RFC4P35249 AC133485.4-201ENST00000561835 220 ntBASIC0.2□□□□□ -2.38
RFC4P35249 MIR3129-201ENST00000581095 76 ntBASIC0.2□□□□□ -2.38
RFC4P35249 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.2□□□□□ -2.38
RFC4P35249 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.2□□□□□ -2.38
RFC4P35249 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
RFC4P35249 Y_RNA.237-201ENST00000364439 102 ntBASIC0.19□□□□□ -2.38
RFC4P35249 SNORA8.2-201ENST00000384372 139 ntBASIC0.19□□□□□ -2.38
RFC4P35249 Y_RNA.512-201ENST00000384518 102 ntBASIC0.19□□□□□ -2.38
RFC4P35249 MIR644A-201ENST00000385262 94 ntBASIC0.19□□□□□ -2.38
RFC4P35249 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.19□□□□□ -2.38
RFC4P35249 RNU4-83P-201ENST00000410863 133 ntBASIC0.19□□□□□ -2.38
RFC4P35249 RNU6-561P-201ENST00000516222 102 ntBASIC0.19□□□□□ -2.38
RFC4P35249 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.19□□□□□ -2.38
RFC4P35249 SNORD118-201ENST00000363593 134 ntBASIC0.18□□□□□ -2.38
RFC4P35249 RNY3P5-201ENST00000384127 102 ntBASIC0.18□□□□□ -2.38
RFC4P35249 RNA5SP237-201ENST00000410414 113 ntBASIC0.18□□□□□ -2.38
RFC4P35249 MIR8066-201ENST00000617280 78 ntBASIC0.18□□□□□ -2.38
RFC4P35249 AL596211.1-201ENST00000569873 2277 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 248.8 ms