Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 RNY1P11-201ENST00000363759 113 ntBASIC0.71□□□□□ -2.3
GDF1P27539 Y_RNA.297-201ENST00000364950 91 ntBASIC0.71□□□□□ -2.3
GDF1P27539 RNU6-1335P-201ENST00000365426 107 ntBASIC0.71□□□□□ -2.3
GDF1P27539 RNU6-1336P-201ENST00000383886 109 ntBASIC0.71□□□□□ -2.3
GDF1P27539 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
GDF1P27539 SNORA26.6-201ENST00000391256 115 ntBASIC0.71□□□□□ -2.3
GDF1P27539 SNORD111-201ENST00000408139 94 ntBASIC0.71□□□□□ -2.3
GDF1P27539 MIR548I3-201ENST00000408378 149 ntBASIC0.71□□□□□ -2.3
GDF1P27539 RNU2-64P-201ENST00000411315 191 ntBASIC0.71□□□□□ -2.3
GDF1P27539 AC004941.2-201ENST00000427009 228 ntBASIC0.71□□□□□ -2.3
GDF1P27539 snoU13.21-201ENST00000459368 105 ntBASIC0.71□□□□□ -2.3
GDF1P27539 RNA5SP255-201ENST00000516370 107 ntBASIC0.71□□□□□ -2.3
GDF1P27539 SCARNA15-202ENST00000516881 127 ntBASIC0.71□□□□□ -2.3
GDF1P27539 uc_338.6-201ENST00000613544 171 ntBASIC0.71□□□□□ -2.3
GDF1P27539 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.7□□□□□ -2.3
GDF1P27539 RNU6-369P-201ENST00000362515 102 ntBASIC0.7□□□□□ -2.3
GDF1P27539 Y_RNA.233-201ENST00000364407 101 ntBASIC0.7□□□□□ -2.3
GDF1P27539 SNORA2B-201ENST00000384583 137 ntBASIC0.7□□□□□ -2.3
GDF1P27539 RNU6-205P-201ENST00000390858 107 ntBASIC0.7□□□□□ -2.3
GDF1P27539 MIR942-201ENST00000401111 86 ntBASIC0.7□□□□□ -2.3
GDF1P27539 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.7□□□□□ -2.3
GDF1P27539 AC006461.1-201ENST00000412637 326 ntBASIC0.7□□□□□ -2.3
GDF1P27539 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.7□□□□□ -2.3
GDF1P27539 Y_RNA.644-201ENST00000459006 113 ntBASIC0.7□□□□□ -2.3
GDF1P27539 RNU7-45P-201ENST00000459460 63 ntBASIC0.7□□□□□ -2.3
GDF1P27539 RNU6-351P-201ENST00000516097 100 ntBASIC0.7□□□□□ -2.3
GDF1P27539 Y_RNA.674-201ENST00000516362 113 ntBASIC0.7□□□□□ -2.3
GDF1P27539 MIR4431-201ENST00000579990 94 ntBASIC0.7□□□□□ -2.3
GDF1P27539 MIR4264-201ENST00000583520 66 ntBASIC0.7□□□□□ -2.3
GDF1P27539 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.7□□□□□ -2.3
GDF1P27539 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
GDF1P27539 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
GDF1P27539 Y_RNA.351-201ENST00000365436 96 ntBASIC0.69□□□□□ -2.3
GDF1P27539 MIR624-201ENST00000385217 97 ntBASIC0.69□□□□□ -2.3
GDF1P27539 RNU6-602P-201ENST00000411155 105 ntBASIC0.69□□□□□ -2.3
GDF1P27539 SEPT7P4-201ENST00000437076 306 ntBASIC0.69□□□□□ -2.3
GDF1P27539 PDCD5P2-201ENST00000507570 312 ntBASIC0.69□□□□□ -2.3
GDF1P27539 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
GDF1P27539 RNU6-138P-201ENST00000515952 107 ntBASIC0.69□□□□□ -2.3
GDF1P27539 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.69□□□□□ -2.3
GDF1P27539 MIR4653-201ENST00000585107 83 ntBASIC0.69□□□□□ -2.3
GDF1P27539 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
GDF1P27539 AC091932.4-201ENST00000623386 200 ntBASIC0.69□□□□□ -2.3
GDF1P27539 MIR342-201ENST00000362212 99 ntBASIC0.68□□□□□ -2.3
GDF1P27539 RNU6-200P-201ENST00000364743 107 ntBASIC0.68□□□□□ -2.3
GDF1P27539 RNU6-597P-201ENST00000365620 102 ntBASIC0.68□□□□□ -2.3
GDF1P27539 Y_RNA.476-201ENST00000384347 108 ntBASIC0.68□□□□□ -2.3
GDF1P27539 Y_RNA.552-201ENST00000384665 112 ntBASIC0.68□□□□□ -2.3
GDF1P27539 MIR100-201ENST00000385259 80 ntBASIC0.68□□□□□ -2.3
GDF1P27539 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
GDF1P27539 RNA5SP127-201ENST00000411051 133 ntBASIC0.68□□□□□ -2.3
GDF1P27539 AC133485.1-201ENST00000567176 124 ntBASIC0.68□□□□□ -2.3
GDF1P27539 AC138907.6-201ENST00000568401 126 ntBASIC0.68□□□□□ -2.3
GDF1P27539 AC022709.1-201ENST00000615967 87 ntBASIC0.68□□□□□ -2.3
GDF1P27539 MIR6740-201ENST00000618268 113 ntBASIC0.68□□□□□ -2.3
GDF1P27539 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
GDF1P27539 MTND5P32-201ENST00000560711 1802 ntBASIC0.67□□□□□ -2.3
GDF1P27539 RNU6-312P-201ENST00000364629 107 ntBASIC0.67□□□□□ -2.3
GDF1P27539 SNORA1.1-201ENST00000364671 133 ntBASIC0.67□□□□□ -2.3
GDF1P27539 Y_RNA.515-201ENST00000384535 112 ntBASIC0.67□□□□□ -2.3
GDF1P27539 RNU6-768P-201ENST00000384683 107 ntBASIC0.67□□□□□ -2.3
GDF1P27539 AL606490.4-201ENST00000423117 127 ntBASIC0.67□□□□□ -2.3
GDF1P27539 AC015818.7-201ENST00000428754 109 ntBASIC0.67□□□□□ -2.3
GDF1P27539 FABP5P4-201ENST00000437203 171 ntBASIC0.67□□□□□ -2.3
GDF1P27539 AC087499.7-201ENST00000441958 109 ntBASIC0.67□□□□□ -2.3
GDF1P27539 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.67□□□□□ -2.3
GDF1P27539 RNU6-1149P-201ENST00000516810 97 ntBASIC0.67□□□□□ -2.3
GDF1P27539 MIR5000-201ENST00000577717 103 ntBASIC0.67□□□□□ -2.3
GDF1P27539 AP000753.3-201ENST00000604083 169 ntBASIC0.67□□□□□ -2.3
GDF1P27539 MIR6717-201ENST00000622747 73 ntBASIC0.67□□□□□ -2.3
GDF1P27539 RNU6-818P-201ENST00000364837 108 ntBASIC0.66□□□□□ -2.3
GDF1P27539 Y_RNA.393-201ENST00000383936 102 ntBASIC0.66□□□□□ -2.3
GDF1P27539 SNORD38B-201ENST00000384690 67 ntBASIC0.66□□□□□ -2.3
GDF1P27539 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
GDF1P27539 SNORD12C-201ENST00000386307 89 ntBASIC0.66□□□□□ -2.3
GDF1P27539 MIR1827-201ENST00000408549 66 ntBASIC0.66□□□□□ -2.3
GDF1P27539 RNU5E-9P-201ENST00000411164 104 ntBASIC0.66□□□□□ -2.3
GDF1P27539 SNORD83.1-201ENST00000411362 77 ntBASIC0.66□□□□□ -2.3
GDF1P27539 RPS3AP1-201ENST00000413190 320 ntBASIC0.66□□□□□ -2.3
GDF1P27539 U7.7-201ENST00000459276 60 ntBASIC0.66□□□□□ -2.3
GDF1P27539 RNU7-80P-201ENST00000459562 61 ntBASIC0.66□□□□□ -2.3
GDF1P27539 AC072026.1-201ENST00000605023 201 ntBASIC0.66□□□□□ -2.3
GDF1P27539 MIR6515-201ENST00000619843 57 ntBASIC0.66□□□□□ -2.3
GDF1P27539 SNORD38B-202ENST00000625943 69 ntBASIC0.66□□□□□ -2.3
GDF1P27539 AL596211.1-201ENST00000569873 2277 ntBASIC0.65□□□□□ -2.31
GDF1P27539 RNU6-682P-201ENST00000363843 106 ntBASIC0.65□□□□□ -2.31
GDF1P27539 RNU6-1082P-201ENST00000364574 107 ntBASIC0.65□□□□□ -2.31
GDF1P27539 Y_RNA.257-201ENST00000364596 102 ntBASIC0.65□□□□□ -2.31
GDF1P27539 MIR605-201ENST00000385078 83 ntBASIC0.65□□□□□ -2.31
GDF1P27539 MIR563-201ENST00000385080 79 ntBASIC0.65□□□□□ -2.31
GDF1P27539 SNORD89-201ENST00000390981 114 ntBASIC0.65□□□□□ -2.31
GDF1P27539 RNU6-994P-201ENST00000410507 111 ntBASIC0.65□□□□□ -2.31
GDF1P27539 Y_RNA.793-201ENST00000411222 111 ntBASIC0.65□□□□□ -2.31
GDF1P27539 RNU7-62P-201ENST00000458856 62 ntBASIC0.65□□□□□ -2.31
GDF1P27539 RNU7-120P-201ENST00000459334 63 ntBASIC0.65□□□□□ -2.31
GDF1P27539 RNU6-1110P-201ENST00000516462 101 ntBASIC0.65□□□□□ -2.31
GDF1P27539 AP002392.1-201ENST00000537692 208 ntBASIC0.65□□□□□ -2.31
GDF1P27539 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.65□□□□□ -2.31
GDF1P27539 MIR4714-201ENST00000580728 77 ntBASIC0.65□□□□□ -2.31
GDF1P27539 MIR6841-201ENST00000637129 72 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 227.1 ms