Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 SNORD93-201ENST00000408813 74 ntBASIC0.22□□□□□ -2.37
BDNFP23560 AL117351.2-201ENST00000513571 157 ntBASIC0.22□□□□□ -2.37
BDNFP23560 MIR3678-201ENST00000578455 94 ntBASIC0.22□□□□□ -2.37
BDNFP23560 AP001094.1-201ENST00000579805 193 ntBASIC0.22□□□□□ -2.37
BDNFP23560 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.22□□□□□ -2.37
BDNFP23560 MIR342-201ENST00000362212 99 ntBASIC0.21□□□□□ -2.38
BDNFP23560 Y_RNA.26-201ENST00000362539 101 ntBASIC0.21□□□□□ -2.38
BDNFP23560 Y_RNA.64-201ENST00000362845 102 ntBASIC0.21□□□□□ -2.38
BDNFP23560 RNU6-653P-201ENST00000363074 106 ntBASIC0.21□□□□□ -2.38
BDNFP23560 SNORD118-201ENST00000363593 134 ntBASIC0.21□□□□□ -2.38
BDNFP23560 Y_RNA.275-201ENST00000364726 110 ntBASIC0.21□□□□□ -2.38
BDNFP23560 Y_RNA.634-201ENST00000364811 113 ntBASIC0.21□□□□□ -2.38
BDNFP23560 RNU6-484P-201ENST00000384016 107 ntBASIC0.21□□□□□ -2.38
BDNFP23560 SNORA8.2-201ENST00000384372 139 ntBASIC0.21□□□□□ -2.38
BDNFP23560 RNU6-1289P-201ENST00000384431 106 ntBASIC0.21□□□□□ -2.38
BDNFP23560 Y_RNA.527-201ENST00000384573 102 ntBASIC0.21□□□□□ -2.38
BDNFP23560 Y_RNA.567-201ENST00000384736 106 ntBASIC0.21□□□□□ -2.38
BDNFP23560 Y_RNA.572-201ENST00000384757 98 ntBASIC0.21□□□□□ -2.38
BDNFP23560 MIR548P-201ENST00000408336 84 ntBASIC0.21□□□□□ -2.38
BDNFP23560 MIR1197-201ENST00000408818 88 ntBASIC0.21□□□□□ -2.38
BDNFP23560 MTND4LP11-201ENST00000422184 280 ntBASIC0.21□□□□□ -2.38
BDNFP23560 RNU6-1338P-201ENST00000516328 91 ntBASIC0.21□□□□□ -2.38
BDNFP23560 RNU6-135P-201ENST00000516769 101 ntBASIC0.21□□□□□ -2.38
BDNFP23560 AC097639.2-201ENST00000603159 172 ntBASIC0.21□□□□□ -2.38
BDNFP23560 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.21□□□□□ -2.38
BDNFP23560 MIR30D-201ENST00000362283 70 ntBASIC0.2□□□□□ -2.38
BDNFP23560 SNORD12C-201ENST00000386307 89 ntBASIC0.2□□□□□ -2.38
BDNFP23560 SNORA79-201ENST00000408376 140 ntBASIC0.2□□□□□ -2.38
BDNFP23560 RNU6-1190P-201ENST00000410811 104 ntBASIC0.2□□□□□ -2.38
BDNFP23560 MIR4680-201ENST00000580906 66 ntBASIC0.2□□□□□ -2.38
BDNFP23560 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
BDNFP23560 AP001282.2-201ENST00000616149 309 ntBASIC0.2□□□□□ -2.38
BDNFP23560 MIR6717-201ENST00000622747 73 ntBASIC0.2□□□□□ -2.38
BDNFP23560 MIR4315-1-201ENST00000636800 73 ntBASIC0.2□□□□□ -2.38
BDNFP23560 MIR4315-2-201ENST00000640925 73 ntBASIC0.2□□□□□ -2.38
BDNFP23560 Y_RNA.91-201ENST00000363042 107 ntBASIC0.19□□□□□ -2.38
BDNFP23560 Y_RNA.138-201ENST00000363462 102 ntBASIC0.19□□□□□ -2.38
BDNFP23560 Y_RNA.351-201ENST00000365436 96 ntBASIC0.19□□□□□ -2.38
BDNFP23560 Y_RNA.535-201ENST00000384612 99 ntBASIC0.19□□□□□ -2.38
BDNFP23560 SNORA20-201ENST00000384662 132 ntBASIC0.19□□□□□ -2.38
BDNFP23560 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
BDNFP23560 RNU6-1203P-201ENST00000410703 110 ntBASIC0.19□□□□□ -2.38
BDNFP23560 RNU4-83P-201ENST00000410863 133 ntBASIC0.19□□□□□ -2.38
BDNFP23560 SNRPGP8-201ENST00000454064 226 ntBASIC0.19□□□□□ -2.38
BDNFP23560 SCARNA24.2-201ENST00000516968 130 ntBASIC0.19□□□□□ -2.38
BDNFP23560 MIR3171-201ENST00000584270 74 ntBASIC0.19□□□□□ -2.38
BDNFP23560 MIR103A1-201ENST00000362165 78 ntBASIC0.18□□□□□ -2.38
BDNFP23560 Y_RNA.61-201ENST00000362835 102 ntBASIC0.18□□□□□ -2.38
BDNFP23560 Y_RNA.153-201ENST00000363615 91 ntBASIC0.18□□□□□ -2.38
BDNFP23560 RNU4-67P-201ENST00000364569 141 ntBASIC0.18□□□□□ -2.38
BDNFP23560 Y_RNA.542-201ENST00000384641 111 ntBASIC0.18□□□□□ -2.38
BDNFP23560 RNA5SP63-201ENST00000391225 112 ntBASIC0.18□□□□□ -2.38
BDNFP23560 SNORA26.6-201ENST00000391256 115 ntBASIC0.18□□□□□ -2.38
BDNFP23560 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.18□□□□□ -2.38
BDNFP23560 MTND5P22-201ENST00000458380 195 ntBASIC0.18□□□□□ -2.38
BDNFP23560 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.18□□□□□ -2.38
BDNFP23560 Y_RNA.44-201ENST00000362676 108 ntBASIC0.17□□□□□ -2.38
BDNFP23560 RNA5SP257-201ENST00000363023 116 ntBASIC0.17□□□□□ -2.38
BDNFP23560 Y_RNA.117-201ENST00000363294 101 ntBASIC0.17□□□□□ -2.38
BDNFP23560 Y_RNA.251-201ENST00000364551 99 ntBASIC0.17□□□□□ -2.38
BDNFP23560 Y_RNA.304-201ENST00000365011 112 ntBASIC0.17□□□□□ -2.38
BDNFP23560 MIR616-201ENST00000385293 97 ntBASIC0.17□□□□□ -2.38
BDNFP23560 MT-TT-201ENST00000387460 66 ntBASIC0.17□□□□□ -2.38
BDNFP23560 RNU6-1228P-201ENST00000391014 107 ntBASIC0.17□□□□□ -2.38
BDNFP23560 AC073261.1-201ENST00000429409 121 ntBASIC0.17□□□□□ -2.38
BDNFP23560 SNORD2.1-201ENST00000458762 69 ntBASIC0.17□□□□□ -2.38
BDNFP23560 AC020661.2-201ENST00000560114 134 ntBASIC0.17□□□□□ -2.38
BDNFP23560 SNORA25.18-201ENST00000607153 114 ntBASIC0.17□□□□□ -2.38
BDNFP23560 Y_RNA.30-201ENST00000362572 97 ntBASIC0.16□□□□□ -2.38
BDNFP23560 Y_RNA.82-201ENST00000363000 102 ntBASIC0.16□□□□□ -2.38
BDNFP23560 Y_RNA.92-201ENST00000363043 102 ntBASIC0.16□□□□□ -2.38
BDNFP23560 Y_RNA.174-201ENST00000363781 105 ntBASIC0.16□□□□□ -2.38
BDNFP23560 Y_RNA.199-201ENST00000364014 102 ntBASIC0.16□□□□□ -2.38
BDNFP23560 Y_RNA.202-201ENST00000364083 110 ntBASIC0.16□□□□□ -2.38
BDNFP23560 Y_RNA.216-201ENST00000364205 93 ntBASIC0.16□□□□□ -2.38
BDNFP23560 Y_RNA.235-201ENST00000364412 102 ntBASIC0.16□□□□□ -2.38
BDNFP23560 Y_RNA.306-201ENST00000365015 102 ntBASIC0.16□□□□□ -2.38
BDNFP23560 Y_RNA.312-201ENST00000365089 102 ntBASIC0.16□□□□□ -2.38
BDNFP23560 Y_RNA.322-201ENST00000365151 102 ntBASIC0.16□□□□□ -2.38
BDNFP23560 Y_RNA.430-201ENST00000384081 110 ntBASIC0.16□□□□□ -2.38
BDNFP23560 SNORA1-201ENST00000384107 130 ntBASIC0.16□□□□□ -2.38
BDNFP23560 RNA5SP299-201ENST00000391203 116 ntBASIC0.16□□□□□ -2.38
BDNFP23560 AL606845.1-201ENST00000404881 255 ntBASIC0.16□□□□□ -2.38
BDNFP23560 Y_RNA.622-201ENST00000411091 108 ntBASIC0.16□□□□□ -2.38
BDNFP23560 Y_RNA.650-201ENST00000459002 102 ntBASIC0.16□□□□□ -2.38
BDNFP23560 Y_RNA.777-201ENST00000516982 102 ntBASIC0.16□□□□□ -2.38
BDNFP23560 Y_RNA.771-201ENST00000598668 102 ntBASIC0.16□□□□□ -2.38
BDNFP23560 MIR6718-201ENST00000616153 80 ntBASIC0.16□□□□□ -2.38
BDNFP23560 Y_RNA.789-201ENST00000622480 102 ntBASIC0.16□□□□□ -2.38
BDNFP23560 snoU2_19.4-201ENST00000364329 80 ntBASIC0.15□□□□□ -2.39
BDNFP23560 RNU6-740P-201ENST00000364734 105 ntBASIC0.15□□□□□ -2.39
BDNFP23560 Y_RNA.374-201ENST00000365606 101 ntBASIC0.15□□□□□ -2.39
BDNFP23560 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
BDNFP23560 RNU6-985P-201ENST00000410182 104 ntBASIC0.15□□□□□ -2.39
BDNFP23560 RNU2-59P-201ENST00000410482 191 ntBASIC0.15□□□□□ -2.39
BDNFP23560 AL512326.2-201ENST00000426359 151 ntBASIC0.15□□□□□ -2.39
BDNFP23560 RNU7-70P-201ENST00000516941 66 ntBASIC0.15□□□□□ -2.39
BDNFP23560 RNU6-1137P-201ENST00000517073 99 ntBASIC0.15□□□□□ -2.39
BDNFP23560 AL662814.1-201ENST00000617364 121 ntBASIC0.15□□□□□ -2.39
BDNFP23560 Y_RNA.23-201ENST00000362496 106 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms