Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RNU6-369P-201ENST00000362515 102 ntBASIC0.63□□□□□ -2.31
CAPN3P20807 RNA5SP62-201ENST00000363457 110 ntBASIC0.63□□□□□ -2.31
CAPN3P20807 RNU6-945P-201ENST00000383947 107 ntBASIC0.63□□□□□ -2.31
CAPN3P20807 Y_RNA.574-201ENST00000384766 95 ntBASIC0.63□□□□□ -2.31
CAPN3P20807 MIR140-201ENST00000385282 100 ntBASIC0.63□□□□□ -2.31
CAPN3P20807 MT-TF-201ENST00000387314 71 ntBASIC0.63□□□□□ -2.31
CAPN3P20807 MIR1257-201ENST00000408490 117 ntBASIC0.63□□□□□ -2.31
CAPN3P20807 RNA5SP193-201ENST00000410353 107 ntBASIC0.63□□□□□ -2.31
CAPN3P20807 RNU6-177P-201ENST00000411257 104 ntBASIC0.63□□□□□ -2.31
CAPN3P20807 AL138752.1-201ENST00000452964 351 ntBASIC0.63□□□□□ -2.31
CAPN3P20807 SNRPGP8-201ENST00000454064 226 ntBASIC0.63□□□□□ -2.31
CAPN3P20807 snoU13.2-201ENST00000459201 104 ntBASIC0.63□□□□□ -2.31
CAPN3P20807 AC010332.2-201ENST00000613083 1904 ntBASIC0.63□□□□□ -2.31
CAPN3P20807 MIR342-201ENST00000362212 99 ntBASIC0.62□□□□□ -2.31
CAPN3P20807 RNU6-1309P-201ENST00000363305 108 ntBASIC0.62□□□□□ -2.31
CAPN3P20807 RNU6-364P-201ENST00000384387 107 ntBASIC0.62□□□□□ -2.31
CAPN3P20807 RNU6-602P-201ENST00000411155 105 ntBASIC0.62□□□□□ -2.31
CAPN3P20807 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.62□□□□□ -2.31
CAPN3P20807 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.62□□□□□ -2.31
CAPN3P20807 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.62□□□□□ -2.31
CAPN3P20807 MIR5087-201ENST00000635826 76 ntBASIC0.62□□□□□ -2.31
CAPN3P20807 snoU2_19.4-201ENST00000364329 80 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 Y_RNA.351-201ENST00000365436 96 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 Y_RNA.518-201ENST00000384552 113 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 RNU6-1237P-201ENST00000384777 107 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 RNU6-1319P-201ENST00000390855 104 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 RNU6-747P-201ENST00000390928 104 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 RNU6-241P-201ENST00000391148 104 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 RNU6-381P-201ENST00000391259 108 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 RNU6-447P-201ENST00000410293 104 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 RNU6-1118P-201ENST00000410382 104 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 RNU6-1076P-201ENST00000410397 104 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 RNU6-355P-201ENST00000410427 104 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 RNU6-791P-201ENST00000410467 104 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 RNU6-705P-201ENST00000410601 104 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 RNU6-1100P-201ENST00000410691 104 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 RNU6-860P-201ENST00000410860 104 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 RNU6-1217P-201ENST00000411276 104 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 RNU6-785P-201ENST00000411324 104 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 RPL39P25-201ENST00000449384 154 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 MTATP8P1-201ENST00000467115 207 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 MIR3152-201ENST00000579801 74 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 U6.90-201ENST00000614007 104 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 U6.70-201ENST00000620287 104 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 AC243829.3-201ENST00000622177 108 ntBASIC0.61□□□□□ -2.31
CAPN3P20807 Y_RNA.145-201ENST00000363527 102 ntBASIC0.6□□□□□ -2.31
CAPN3P20807 MIR548H3-201ENST00000408771 118 ntBASIC0.6□□□□□ -2.31
CAPN3P20807 MIR1197-201ENST00000408818 88 ntBASIC0.6□□□□□ -2.31
CAPN3P20807 Y_RNA.618-201ENST00000410949 107 ntBASIC0.6□□□□□ -2.31
CAPN3P20807 AC092628.1-201ENST00000436250 252 ntBASIC0.6□□□□□ -2.31
CAPN3P20807 RN7SKP12-201ENST00000516275 143 ntBASIC0.6□□□□□ -2.31
CAPN3P20807 RNU7-70P-201ENST00000516941 66 ntBASIC0.6□□□□□ -2.31
CAPN3P20807 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
CAPN3P20807 Y_RNA.812-201ENST00000610788 101 ntBASIC0.6□□□□□ -2.31
CAPN3P20807 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.6□□□□□ -2.31
CAPN3P20807 Y_RNA.784-201ENST00000613803 101 ntBASIC0.6□□□□□ -2.31
CAPN3P20807 Y_RNA.787-201ENST00000616522 101 ntBASIC0.6□□□□□ -2.31
CAPN3P20807 Y_RNA.780-201ENST00000617336 101 ntBASIC0.6□□□□□ -2.31
CAPN3P20807 MIR6740-201ENST00000618268 113 ntBASIC0.6□□□□□ -2.31
CAPN3P20807 Y_RNA.801-201ENST00000619005 101 ntBASIC0.6□□□□□ -2.31
CAPN3P20807 Y_RNA.483-201ENST00000384380 101 ntBASIC0.59□□□□□ -2.31
CAPN3P20807 Y_RNA.512-201ENST00000384518 102 ntBASIC0.59□□□□□ -2.31
CAPN3P20807 RNU6-453P-201ENST00000516819 85 ntBASIC0.59□□□□□ -2.31
CAPN3P20807 Y_RNA.149-201ENST00000363558 117 ntBASIC0.58□□□□□ -2.32
CAPN3P20807 Y_RNA.326-201ENST00000365176 113 ntBASIC0.58□□□□□ -2.32
CAPN3P20807 RNU6-1292P-201ENST00000383856 107 ntBASIC0.58□□□□□ -2.32
CAPN3P20807 SNORA20-201ENST00000384662 132 ntBASIC0.58□□□□□ -2.32
CAPN3P20807 MIR606-201ENST00000384851 96 ntBASIC0.58□□□□□ -2.32
CAPN3P20807 MIR125B2-201ENST00000385128 89 ntBASIC0.58□□□□□ -2.32
CAPN3P20807 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.58□□□□□ -2.32
CAPN3P20807 RNU7-56P-201ENST00000458744 62 ntBASIC0.58□□□□□ -2.32
CAPN3P20807 RNU7-185P-201ENST00000459215 60 ntBASIC0.58□□□□□ -2.32
CAPN3P20807 AC004812.1-201ENST00000540773 146 ntBASIC0.58□□□□□ -2.32
CAPN3P20807 MIR3612-201ENST00000579753 87 ntBASIC0.58□□□□□ -2.32
CAPN3P20807 MIR5197-201ENST00000583721 112 ntBASIC0.58□□□□□ -2.32
CAPN3P20807 AL442067.1-201ENST00000613261 223 ntBASIC0.58□□□□□ -2.32
CAPN3P20807 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
CAPN3P20807 Y_RNA.54-201ENST00000362766 105 ntBASIC0.57□□□□□ -2.32
CAPN3P20807 Y_RNA.416-201ENST00000384014 113 ntBASIC0.57□□□□□ -2.32
CAPN3P20807 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
CAPN3P20807 RNU4-43P-201ENST00000410628 137 ntBASIC0.57□□□□□ -2.32
CAPN3P20807 RNU6-651P-201ENST00000411040 105 ntBASIC0.57□□□□□ -2.32
CAPN3P20807 AC015818.7-201ENST00000428754 109 ntBASIC0.57□□□□□ -2.32
CAPN3P20807 AC087499.7-201ENST00000441958 109 ntBASIC0.57□□□□□ -2.32
CAPN3P20807 AC020891.4-201ENST00000605745 93 ntBASIC0.57□□□□□ -2.32
CAPN3P20807 MIR6717-201ENST00000622747 73 ntBASIC0.57□□□□□ -2.32
CAPN3P20807 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CAPN3P20807 MIR18A-201ENST00000362310 71 ntBASIC0.56□□□□□ -2.32
CAPN3P20807 RNU6-653P-201ENST00000363074 106 ntBASIC0.56□□□□□ -2.32
CAPN3P20807 SNORA1-201ENST00000384107 130 ntBASIC0.56□□□□□ -2.32
CAPN3P20807 MT-TW-201ENST00000387382 68 ntBASIC0.56□□□□□ -2.32
CAPN3P20807 MIR548F4-201ENST00000408515 105 ntBASIC0.56□□□□□ -2.32
CAPN3P20807 RNA5SP237-201ENST00000410414 113 ntBASIC0.56□□□□□ -2.32
CAPN3P20807 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.56□□□□□ -2.32
CAPN3P20807 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.56□□□□□ -2.32
CAPN3P20807 AL117187.1-201ENST00000555482 181 ntBASIC0.56□□□□□ -2.32
CAPN3P20807 MIR3129-201ENST00000581095 76 ntBASIC0.56□□□□□ -2.32
CAPN3P20807 AL365205.2-201ENST00000594586 68 ntBASIC0.56□□□□□ -2.32
CAPN3P20807 Y_RNA.23-201ENST00000362496 106 ntBASIC0.55□□□□□ -2.32
CAPN3P20807 Y_RNA.280-201ENST00000364765 112 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms