Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 Y_RNA.477-201ENST00000384352 108 ntBASIC0.6□□□□□ -2.31
ERCC2P18074 Y_RNA.542-201ENST00000384641 111 ntBASIC0.6□□□□□ -2.31
ERCC2P18074 Y_RNA.556-201ENST00000384677 113 ntBASIC0.6□□□□□ -2.31
ERCC2P18074 MIR573-201ENST00000384964 99 ntBASIC0.6□□□□□ -2.31
ERCC2P18074 RNU6-493P-201ENST00000391321 108 ntBASIC0.6□□□□□ -2.31
ERCC2P18074 MIR1302-3-201ENST00000408128 138 ntBASIC0.6□□□□□ -2.31
ERCC2P18074 RNU4-43P-201ENST00000410628 137 ntBASIC0.6□□□□□ -2.31
ERCC2P18074 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
ERCC2P18074 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.6□□□□□ -2.31
ERCC2P18074 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.6□□□□□ -2.31
ERCC2P18074 RNU7-45P-201ENST00000459460 63 ntBASIC0.6□□□□□ -2.31
ERCC2P18074 SCARNA15.1-201ENST00000516384 125 ntBASIC0.6□□□□□ -2.31
ERCC2P18074 MIR5197-201ENST00000583721 112 ntBASIC0.6□□□□□ -2.31
ERCC2P18074 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
ERCC2P18074 Y_RNA.65-201ENST00000362846 100 ntBASIC0.59□□□□□ -2.31
ERCC2P18074 RNY4P28-201ENST00000365281 93 ntBASIC0.59□□□□□ -2.31
ERCC2P18074 RNU6-945P-201ENST00000383947 107 ntBASIC0.59□□□□□ -2.31
ERCC2P18074 RNY1P8-201ENST00000383970 114 ntBASIC0.59□□□□□ -2.31
ERCC2P18074 RNU6-1165P-201ENST00000410119 107 ntBASIC0.59□□□□□ -2.31
ERCC2P18074 Y_RNA.618-201ENST00000410949 107 ntBASIC0.59□□□□□ -2.31
ERCC2P18074 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.59□□□□□ -2.31
ERCC2P18074 snoU13.2-201ENST00000459201 104 ntBASIC0.59□□□□□ -2.31
ERCC2P18074 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.59□□□□□ -2.31
ERCC2P18074 RNU2-4P-201ENST00000606190 192 ntBASIC0.59□□□□□ -2.31
ERCC2P18074 MIR6515-201ENST00000619843 57 ntBASIC0.59□□□□□ -2.31
ERCC2P18074 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.59□□□□□ -2.32
ERCC2P18074 Y_RNA.162-201ENST00000363683 102 ntBASIC0.58□□□□□ -2.32
ERCC2P18074 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
ERCC2P18074 SNORD12C-201ENST00000386307 89 ntBASIC0.58□□□□□ -2.32
ERCC2P18074 MIR18B-201ENST00000454574 71 ntBASIC0.58□□□□□ -2.32
ERCC2P18074 RNU7-80P-201ENST00000459562 61 ntBASIC0.58□□□□□ -2.32
ERCC2P18074 Y_RNA.668-201ENST00000516233 93 ntBASIC0.58□□□□□ -2.32
ERCC2P18074 RNU6-1045P-201ENST00000516321 107 ntBASIC0.58□□□□□ -2.32
ERCC2P18074 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
ERCC2P18074 AC018659.1-201ENST00000551083 169 ntBASIC0.58□□□□□ -2.32
ERCC2P18074 MIR6717-201ENST00000622747 73 ntBASIC0.58□□□□□ -2.32
ERCC2P18074 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
ERCC2P18074 RNU6-923P-201ENST00000364753 107 ntBASIC0.57□□□□□ -2.32
ERCC2P18074 RNU6-1292P-201ENST00000383856 107 ntBASIC0.57□□□□□ -2.32
ERCC2P18074 Y_RNA.539-201ENST00000384635 107 ntBASIC0.57□□□□□ -2.32
ERCC2P18074 RNU6-578P-201ENST00000390980 103 ntBASIC0.57□□□□□ -2.32
ERCC2P18074 SNORA26.6-201ENST00000391256 115 ntBASIC0.57□□□□□ -2.32
ERCC2P18074 RNU6-177P-201ENST00000411257 104 ntBASIC0.57□□□□□ -2.32
ERCC2P18074 SEPT7P4-201ENST00000437076 306 ntBASIC0.57□□□□□ -2.32
ERCC2P18074 RNU7-56P-201ENST00000458744 62 ntBASIC0.57□□□□□ -2.32
ERCC2P18074 MTND1P19-201ENST00000511780 315 ntBASIC0.57□□□□□ -2.32
ERCC2P18074 AL365205.2-201ENST00000594586 68 ntBASIC0.57□□□□□ -2.32
ERCC2P18074 AC091932.4-201ENST00000623386 200 ntBASIC0.57□□□□□ -2.32
ERCC2P18074 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
ERCC2P18074 AL596211.1-201ENST00000569873 2277 ntBASIC0.56□□□□□ -2.32
ERCC2P18074 Y_RNA.20-201ENST00000362479 113 ntBASIC0.56□□□□□ -2.32
ERCC2P18074 RNU1-133P-201ENST00000364867 167 ntBASIC0.56□□□□□ -2.32
ERCC2P18074 AL118496.2-201ENST00000448300 230 ntBASIC0.56□□□□□ -2.32
ERCC2P18074 Y_RNA.797-201ENST00000515977 94 ntBASIC0.56□□□□□ -2.32
ERCC2P18074 SNORD116-25-201ENST00000516517 92 ntBASIC0.56□□□□□ -2.32
ERCC2P18074 MIR378D2-201ENST00000580636 98 ntBASIC0.56□□□□□ -2.32
ERCC2P18074 RNA5SP499-201ENST00000363982 119 ntBASIC0.55□□□□□ -2.32
ERCC2P18074 RNY1-201ENST00000364228 113 ntBASIC0.55□□□□□ -2.32
ERCC2P18074 Y_RNA.350-201ENST00000365409 98 ntBASIC0.55□□□□□ -2.32
ERCC2P18074 Y_RNA.454-201ENST00000384224 113 ntBASIC0.55□□□□□ -2.32
ERCC2P18074 RNU6-1237P-201ENST00000384777 107 ntBASIC0.55□□□□□ -2.32
ERCC2P18074 MIR563-201ENST00000385080 79 ntBASIC0.55□□□□□ -2.32
ERCC2P18074 MIR938-201ENST00000401216 83 ntBASIC0.55□□□□□ -2.32
ERCC2P18074 RNA5SP261-201ENST00000410536 106 ntBASIC0.55□□□□□ -2.32
ERCC2P18074 Y_RNA.626-201ENST00000411288 95 ntBASIC0.55□□□□□ -2.32
ERCC2P18074 RNU7-185P-201ENST00000459215 60 ntBASIC0.55□□□□□ -2.32
ERCC2P18074 MIR3612-201ENST00000579753 87 ntBASIC0.55□□□□□ -2.32
ERCC2P18074 Z83818.1-201ENST00000603584 150 ntBASIC0.55□□□□□ -2.32
ERCC2P18074 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.55□□□□□ -2.32
ERCC2P18074 RNU6-978P-201ENST00000364371 103 ntBASIC0.54□□□□□ -2.32
ERCC2P18074 MIR140-201ENST00000385282 100 ntBASIC0.54□□□□□ -2.32
ERCC2P18074 SNORD58.1-201ENST00000391313 66 ntBASIC0.54□□□□□ -2.32
ERCC2P18074 MIR1257-201ENST00000408490 117 ntBASIC0.54□□□□□ -2.32
ERCC2P18074 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.54□□□□□ -2.32
ERCC2P18074 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.54□□□□□ -2.32
ERCC2P18074 MIR4308-201ENST00000580634 81 ntBASIC0.54□□□□□ -2.32
ERCC2P18074 MIR3128-201ENST00000581957 66 ntBASIC0.54□□□□□ -2.32
ERCC2P18074 AC062037.2-201ENST00000610137 73 ntBASIC0.54□□□□□ -2.32
ERCC2P18074 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.54□□□□□ -2.32
ERCC2P18074 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
ERCC2P18074 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
ERCC2P18074 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
ERCC2P18074 MIR30D-201ENST00000362283 70 ntBASIC0.53□□□□□ -2.32
ERCC2P18074 MIR18A-201ENST00000362310 71 ntBASIC0.53□□□□□ -2.32
ERCC2P18074 RNA5SP347-201ENST00000362445 119 ntBASIC0.53□□□□□ -2.32
ERCC2P18074 Y_RNA.121-201ENST00000363309 113 ntBASIC0.53□□□□□ -2.32
ERCC2P18074 Y_RNA.182-201ENST00000363880 111 ntBASIC0.53□□□□□ -2.32
ERCC2P18074 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
ERCC2P18074 Y_RNA.478-201ENST00000384358 107 ntBASIC0.53□□□□□ -2.32
ERCC2P18074 RNU6-364P-201ENST00000384387 107 ntBASIC0.53□□□□□ -2.32
ERCC2P18074 Y_RNA.571-201ENST00000384753 98 ntBASIC0.53□□□□□ -2.32
ERCC2P18074 MIR489-201ENST00000384923 84 ntBASIC0.53□□□□□ -2.32
ERCC2P18074 MIR125B2-201ENST00000385128 89 ntBASIC0.53□□□□□ -2.32
ERCC2P18074 Y_RNA.680-201ENST00000516441 93 ntBASIC0.53□□□□□ -2.32
ERCC2P18074 RNU7-70P-201ENST00000516941 66 ntBASIC0.53□□□□□ -2.32
ERCC2P18074 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
ERCC2P18074 MIR6513-201ENST00000621188 64 ntBASIC0.53□□□□□ -2.32
ERCC2P18074 RNU6-597P-201ENST00000365620 102 ntBASIC0.52□□□□□ -2.33
ERCC2P18074 RNU6-643P-201ENST00000384018 107 ntBASIC0.52□□□□□ -2.33
ERCC2P18074 MIR598-201ENST00000384868 97 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 190.2 ms