Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.36□□□□□ -2.35
COL11A1P12107 AC091959.1-201ENST00000495857 238 ntBASIC0.36□□□□□ -2.35
COL11A1P12107 AC113410.1-201ENST00000505029 247 ntBASIC0.36□□□□□ -2.35
COL11A1P12107 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.36□□□□□ -2.35
COL11A1P12107 RNU6-998P-201ENST00000515894 101 ntBASIC0.36□□□□□ -2.35
COL11A1P12107 AC012433.1-201ENST00000588916 398 ntBASIC0.36□□□□□ -2.35
COL11A1P12107 MTND1P7-201ENST00000632801 297 ntBASIC0.36□□□□□ -2.35
COL11A1P12107 RNU6-1272P-201ENST00000362776 107 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 RNU6-653P-201ENST00000363074 106 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 Y_RNA.170-201ENST00000363746 110 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 RNU6-654P-201ENST00000364373 107 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 Y_RNA.432-201ENST00000384087 111 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 Y_RNA.572-201ENST00000384757 98 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
COL11A1P12107 RNU6-1319P-201ENST00000390855 104 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 RNU6-747P-201ENST00000390928 104 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 RNU6-241P-201ENST00000391148 104 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 RNU6-177P-201ENST00000411257 104 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 AC090844.1-201ENST00000422019 156 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 AC244098.3-201ENST00000424803 96 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 RPS29P24-201ENST00000486345 171 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 PDCD5P2-201ENST00000507570 312 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 RNY3P16-201ENST00000516338 101 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 RNU6-1270P-201ENST00000517128 108 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 MIR3152-201ENST00000579801 74 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 MIR548AO-201ENST00000579992 96 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 AL365205.2-201ENST00000594586 68 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 AC097639.2-201ENST00000603159 172 ntBASIC0.35□□□□□ -2.35
COL11A1P12107 MIR342-201ENST00000362212 99 ntBASIC0.34□□□□□ -2.35
COL11A1P12107 Y_RNA.416-201ENST00000384014 113 ntBASIC0.34□□□□□ -2.35
COL11A1P12107 Y_RNA.476-201ENST00000384347 108 ntBASIC0.34□□□□□ -2.35
COL11A1P12107 Y_RNA.547-201ENST00000384654 119 ntBASIC0.34□□□□□ -2.35
COL11A1P12107 Y_RNA.574-201ENST00000384766 95 ntBASIC0.34□□□□□ -2.35
COL11A1P12107 MIR518F-201ENST00000384973 87 ntBASIC0.34□□□□□ -2.35
COL11A1P12107 RNU7-56P-201ENST00000458744 62 ntBASIC0.34□□□□□ -2.35
COL11A1P12107 RNU6-977P-201ENST00000516411 103 ntBASIC0.34□□□□□ -2.35
COL11A1P12107 AC062037.2-201ENST00000610137 73 ntBASIC0.34□□□□□ -2.35
COL11A1P12107 MIR302B-201ENST00000362188 73 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 Y_RNA.24-201ENST00000362508 103 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 Y_RNA.76-201ENST00000362931 109 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 RNU6-103P-201ENST00000363686 107 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 Y_RNA.168-201ENST00000363740 102 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 RNA5SP48-201ENST00000363969 126 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 SNORD27-201ENST00000363981 72 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 RNA5SP368-201ENST00000364298 116 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 Y_RNA.241-201ENST00000364470 117 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 RNU6-934P-201ENST00000365154 107 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 RNU6-1189P-201ENST00000383958 107 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 SNORD61-201ENST00000384252 73 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 MIR518A1-201ENST00000385068 85 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 SNORD58.1-201ENST00000391313 66 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 RNU2-38P-201ENST00000410856 79 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 AC002429.1-201ENST00000437672 148 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 RNA5SP153-201ENST00000516498 76 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 AL442067.1-201ENST00000613261 223 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 U4.1-201ENST00000620349 87 ntBASIC0.34□□□□□ -2.36
COL11A1P12107 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.34□□□□□ -2.36
COL11A1P12107 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
COL11A1P12107 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
COL11A1P12107 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
COL11A1P12107 Y_RNA.304-201ENST00000365011 112 ntBASIC0.33□□□□□ -2.36
COL11A1P12107 SNORA1-201ENST00000384107 130 ntBASIC0.33□□□□□ -2.36
COL11A1P12107 Y_RNA.459-201ENST00000384251 102 ntBASIC0.33□□□□□ -2.36
COL11A1P12107 MIR616-201ENST00000385293 97 ntBASIC0.33□□□□□ -2.36
COL11A1P12107 SNORD105-201ENST00000386910 85 ntBASIC0.33□□□□□ -2.36
COL11A1P12107 SNORA26.6-201ENST00000391256 115 ntBASIC0.33□□□□□ -2.36
COL11A1P12107 Y_RNA.720-201ENST00000517166 92 ntBASIC0.33□□□□□ -2.36
COL11A1P12107 MIR4431-201ENST00000579990 94 ntBASIC0.33□□□□□ -2.36
COL11A1P12107 MIR4804-201ENST00000581683 73 ntBASIC0.33□□□□□ -2.36
COL11A1P12107 AC141273.2-201ENST00000618989 130 ntBASIC0.33□□□□□ -2.36
COL11A1P12107 AC015726.2-201ENST00000620112 122 ntBASIC0.33□□□□□ -2.36
COL11A1P12107 MIR6516-201ENST00000630554 81 ntBASIC0.33□□□□□ -2.36
COL11A1P12107 Y_RNA.23-201ENST00000362496 106 ntBASIC0.32□□□□□ -2.36
COL11A1P12107 Y_RNA.91-201ENST00000363042 107 ntBASIC0.32□□□□□ -2.36
COL11A1P12107 SNORA1.1-201ENST00000364671 133 ntBASIC0.32□□□□□ -2.36
COL11A1P12107 RNY4P28-201ENST00000365281 93 ntBASIC0.32□□□□□ -2.36
COL11A1P12107 RNU6-1289P-201ENST00000384431 106 ntBASIC0.32□□□□□ -2.36
COL11A1P12107 RNU6-1011P-201ENST00000384668 107 ntBASIC0.32□□□□□ -2.36
COL11A1P12107 MIR520F-201ENST00000384824 87 ntBASIC0.32□□□□□ -2.36
COL11A1P12107 MIR802-201ENST00000390235 94 ntBASIC0.32□□□□□ -2.36
COL11A1P12107 MIR1302-3-201ENST00000408128 138 ntBASIC0.32□□□□□ -2.36
COL11A1P12107 Z95118.1-201ENST00000421372 247 ntBASIC0.32□□□□□ -2.36
COL11A1P12107 MIR18B-201ENST00000454574 71 ntBASIC0.32□□□□□ -2.36
COL11A1P12107 AC107297.1-201ENST00000459991 176 ntBASIC0.32□□□□□ -2.36
COL11A1P12107 RNU6-561P-201ENST00000516222 102 ntBASIC0.32□□□□□ -2.36
COL11A1P12107 RNU4-54P-201ENST00000516428 129 ntBASIC0.32□□□□□ -2.36
COL11A1P12107 AC023827.1-201ENST00000569247 97 ntBASIC0.32□□□□□ -2.36
COL11A1P12107 AC011921.3-201ENST00000605540 361 ntBASIC0.32□□□□□ -2.36
COL11A1P12107 MIR6740-201ENST00000618268 113 ntBASIC0.32□□□□□ -2.36
COL11A1P12107 U6.104-201ENST00000637979 90 ntBASIC0.32□□□□□ -2.36
COL11A1P12107 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.32□□□□□ -2.36
COL11A1P12107 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
COL11A1P12107 MIR624-201ENST00000385217 97 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 RNU6-578P-201ENST00000390980 103 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 SNORD77.3-201ENST00000391113 65 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 RNU6-381P-201ENST00000391259 108 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 RNU6-493P-201ENST00000391321 108 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 RNA5SP95-201ENST00000410319 137 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.31□□□□□ -2.36
COL11A1P12107 RNU4-71P-201ENST00000516258 113 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 232.3 ms