Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MIR5688-201ENST00000580619 83 ntBASIC0.2□□□□□ -2.38
CD74P04233 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.2□□□□□ -2.38
CD74P04233 SNORD92-201ENST00000585078 85 ntBASIC0.2□□□□□ -2.38
CD74P04233 SNORA25.18-201ENST00000607153 114 ntBASIC0.2□□□□□ -2.38
CD74P04233 AL109933.3-201ENST00000619095 188 ntBASIC0.2□□□□□ -2.38
CD74P04233 MIR30D-201ENST00000362283 70 ntBASIC0.19□□□□□ -2.38
CD74P04233 RNU5E-4P-201ENST00000364931 120 ntBASIC0.19□□□□□ -2.38
CD74P04233 Y_RNA.410-201ENST00000383992 113 ntBASIC0.19□□□□□ -2.38
CD74P04233 RNU6-484P-201ENST00000384016 107 ntBASIC0.19□□□□□ -2.38
CD74P04233 SNORA1-201ENST00000384107 130 ntBASIC0.19□□□□□ -2.38
CD74P04233 Y_RNA.535-201ENST00000384612 99 ntBASIC0.19□□□□□ -2.38
CD74P04233 MIR518A1-201ENST00000385068 85 ntBASIC0.19□□□□□ -2.38
CD74P04233 AL606845.1-201ENST00000404881 255 ntBASIC0.19□□□□□ -2.38
CD74P04233 SNORA40.8-201ENST00000411034 126 ntBASIC0.19□□□□□ -2.38
CD74P04233 RNU6-651P-201ENST00000411040 105 ntBASIC0.19□□□□□ -2.38
CD74P04233 SNRPGP8-201ENST00000454064 226 ntBASIC0.19□□□□□ -2.38
CD74P04233 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.19□□□□□ -2.38
CD74P04233 MIR3678-201ENST00000578455 94 ntBASIC0.19□□□□□ -2.38
CD74P04233 AP001282.2-201ENST00000616149 309 ntBASIC0.19□□□□□ -2.38
CD74P04233 MIR6717-201ENST00000622747 73 ntBASIC0.19□□□□□ -2.38
CD74P04233 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
CD74P04233 Y_RNA.44-201ENST00000362676 108 ntBASIC0.18□□□□□ -2.38
CD74P04233 Y_RNA.61-201ENST00000362835 102 ntBASIC0.18□□□□□ -2.38
CD74P04233 Y_RNA.85-201ENST00000363014 111 ntBASIC0.18□□□□□ -2.38
CD74P04233 snoU2_19.4-201ENST00000364329 80 ntBASIC0.18□□□□□ -2.38
CD74P04233 RNU6-740P-201ENST00000364734 105 ntBASIC0.18□□□□□ -2.38
CD74P04233 RNU6-867P-201ENST00000364956 107 ntBASIC0.18□□□□□ -2.38
CD74P04233 RNU6-597P-201ENST00000365620 102 ntBASIC0.18□□□□□ -2.38
CD74P04233 Y_RNA.567-201ENST00000384736 106 ntBASIC0.18□□□□□ -2.38
CD74P04233 MIR563-201ENST00000385080 79 ntBASIC0.18□□□□□ -2.38
CD74P04233 MT-TF-201ENST00000387314 71 ntBASIC0.18□□□□□ -2.38
CD74P04233 RNU6-1203P-201ENST00000410703 110 ntBASIC0.18□□□□□ -2.38
CD74P04233 SNRPGP12-201ENST00000449481 213 ntBASIC0.18□□□□□ -2.38
CD74P04233 RNU6-448P-201ENST00000517052 107 ntBASIC0.18□□□□□ -2.38
CD74P04233 AC020661.2-201ENST00000560114 134 ntBASIC0.18□□□□□ -2.38
CD74P04233 AC022523.2-201ENST00000561045 150 ntBASIC0.18□□□□□ -2.38
CD74P04233 MIR3129-201ENST00000581095 76 ntBASIC0.18□□□□□ -2.38
CD74P04233 MIR4514-201ENST00000581410 57 ntBASIC0.18□□□□□ -2.38
CD74P04233 MIR376A2-201ENST00000636782 80 ntBASIC0.18□□□□□ -2.38
CD74P04233 RNU6-349P-201ENST00000362402 107 ntBASIC0.17□□□□□ -2.38
CD74P04233 Y_RNA.23-201ENST00000362496 106 ntBASIC0.17□□□□□ -2.38
CD74P04233 SNORD44.1-201ENST00000363202 61 ntBASIC0.17□□□□□ -2.38
CD74P04233 SNORA26.6-201ENST00000391256 115 ntBASIC0.17□□□□□ -2.38
CD74P04233 MIR1197-201ENST00000408818 88 ntBASIC0.17□□□□□ -2.38
CD74P04233 RNA5SP237-201ENST00000410414 113 ntBASIC0.17□□□□□ -2.38
CD74P04233 RNU4-83P-201ENST00000410863 133 ntBASIC0.17□□□□□ -2.38
CD74P04233 Y_RNA.617-201ENST00000410920 90 ntBASIC0.17□□□□□ -2.38
CD74P04233 RNA5SP127-201ENST00000411051 133 ntBASIC0.17□□□□□ -2.38
CD74P04233 RNU2-55P-201ENST00000411146 174 ntBASIC0.17□□□□□ -2.38
CD74P04233 AC108740.1-201ENST00000498629 225 ntBASIC0.17□□□□□ -2.38
CD74P04233 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.17□□□□□ -2.38
CD74P04233 RNA5SP153-201ENST00000516498 76 ntBASIC0.17□□□□□ -2.38
CD74P04233 AC133485.4-201ENST00000561835 220 ntBASIC0.17□□□□□ -2.38
CD74P04233 uc_338.16-201ENST00000621804 95 ntBASIC0.17□□□□□ -2.38
CD74P04233 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.17□□□□□ -2.38
CD74P04233 AL596211.1-201ENST00000569873 2277 ntBASIC0.16□□□□□ -2.38
CD74P04233 RNU6-403P-201ENST00000363163 104 ntBASIC0.16□□□□□ -2.38
CD74P04233 RNA5SP62-201ENST00000363457 110 ntBASIC0.16□□□□□ -2.38
CD74P04233 Y_RNA.202-201ENST00000364083 110 ntBASIC0.16□□□□□ -2.38
CD74P04233 Y_RNA.237-201ENST00000364439 102 ntBASIC0.16□□□□□ -2.38
CD74P04233 RNU4-67P-201ENST00000364569 141 ntBASIC0.16□□□□□ -2.38
CD74P04233 SNORA8.2-201ENST00000384372 139 ntBASIC0.16□□□□□ -2.38
CD74P04233 Y_RNA.512-201ENST00000384518 102 ntBASIC0.16□□□□□ -2.38
CD74P04233 RNA5SP63-201ENST00000391225 112 ntBASIC0.16□□□□□ -2.38
CD74P04233 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.16□□□□□ -2.38
CD74P04233 Y_RNA.679-201ENST00000516416 91 ntBASIC0.16□□□□□ -2.38
CD74P04233 AP001094.1-201ENST00000579805 193 ntBASIC0.16□□□□□ -2.38
CD74P04233 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.16□□□□□ -2.38
CD74P04233 MIR644A-201ENST00000385262 94 ntBASIC0.15□□□□□ -2.39
CD74P04233 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
CD74P04233 Y_RNA.590-201ENST00000410140 107 ntBASIC0.15□□□□□ -2.39
CD74P04233 SEPT7P4-201ENST00000437076 306 ntBASIC0.15□□□□□ -2.39
CD74P04233 TRBVB-201ENST00000477100 408 ntBASIC0.15□□□□□ -2.39
CD74P04233 RNU6-561P-201ENST00000516222 102 ntBASIC0.15□□□□□ -2.39
CD74P04233 AL356055.1-201ENST00000602528 446 ntBASIC0.15□□□□□ -2.39
CD74P04233 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.15□□□□□ -2.39
CD74P04233 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.15□□□□□ -2.39
CD74P04233 AL662814.1-201ENST00000617364 121 ntBASIC0.15□□□□□ -2.39
CD74P04233 RNY3P5-201ENST00000384127 102 ntBASIC0.14□□□□□ -2.39
CD74P04233 MIR616-201ENST00000385293 97 ntBASIC0.14□□□□□ -2.39
CD74P04233 RNU6-985P-201ENST00000410182 104 ntBASIC0.14□□□□□ -2.39
CD74P04233 RNU7-80P-201ENST00000459562 61 ntBASIC0.14□□□□□ -2.39
CD74P04233 AP003327.1-201ENST00000529684 127 ntBASIC0.14□□□□□ -2.39
CD74P04233 AL442663.2-201ENST00000554385 511 ntBASIC0.14□□□□□ -2.39
CD74P04233 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.14□□□□□ -2.39
CD74P04233 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
CD74P04233 MIR2909-201ENST00000617113 69 ntBASIC0.14□□□□□ -2.39
CD74P04233 MIR8066-201ENST00000617280 78 ntBASIC0.14□□□□□ -2.39
CD74P04233 AL365265.1-201ENST00000621045 234 ntBASIC0.14□□□□□ -2.39
CD74P04233 Y_RNA.13-201ENST00000362403 112 ntBASIC0.13□□□□□ -2.39
CD74P04233 RNA5SP257-201ENST00000363023 116 ntBASIC0.13□□□□□ -2.39
CD74P04233 RNU6-653P-201ENST00000363074 106 ntBASIC0.13□□□□□ -2.39
CD74P04233 SNORD118-201ENST00000363593 134 ntBASIC0.13□□□□□ -2.39
CD74P04233 RNU6-713P-201ENST00000384761 107 ntBASIC0.13□□□□□ -2.39
CD74P04233 RNA5SP261-201ENST00000410536 106 ntBASIC0.13□□□□□ -2.39
CD74P04233 AC073261.1-201ENST00000429409 121 ntBASIC0.13□□□□□ -2.39
CD74P04233 RNU6-469P-201ENST00000516253 101 ntBASIC0.13□□□□□ -2.39
CD74P04233 AC097639.2-201ENST00000603159 172 ntBASIC0.13□□□□□ -2.39
CD74P04233 U2.14-201ENST00000615943 113 ntBASIC0.13□□□□□ -2.39
CD74P04233 MIR6718-201ENST00000616153 80 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms