Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
RAF1P04049 RNU6-998P-201ENST00000515894 101 ntBASIC1.05□□□□□ -2.24
RAF1P04049 RNU6-1149P-201ENST00000516810 97 ntBASIC1.05□□□□□ -2.24
RAF1P04049 MIR6779-201ENST00000617283 64 ntBASIC1.05□□□□□ -2.24
RAF1P04049 AC027335.2-201ENST00000624030 375 ntBASIC1.05□□□□□ -2.24
RAF1P04049 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
RAF1P04049 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
RAF1P04049 MTND5P32-201ENST00000560711 1802 ntBASIC1.04□□□□□ -2.24
RAF1P04049 MIR342-201ENST00000362212 99 ntBASIC1.04□□□□□ -2.24
RAF1P04049 Y_RNA.36-201ENST00000362602 112 ntBASIC1.04□□□□□ -2.24
RAF1P04049 Y_RNA.52-201ENST00000362760 96 ntBASIC1.04□□□□□ -2.24
RAF1P04049 RNA5SP264-201ENST00000363115 107 ntBASIC1.04□□□□□ -2.24
RAF1P04049 RNU6-151P-201ENST00000364158 107 ntBASIC1.04□□□□□ -2.24
RAF1P04049 RNU4-11P-201ENST00000365287 132 ntBASIC1.04□□□□□ -2.24
RAF1P04049 SNORA70.7-201ENST00000384159 133 ntBASIC1.04□□□□□ -2.24
RAF1P04049 Y_RNA.497-201ENST00000384447 98 ntBASIC1.04□□□□□ -2.24
RAF1P04049 RNU6-913P-201ENST00000390913 95 ntBASIC1.04□□□□□ -2.24
RAF1P04049 SNORD37.2-201ENST00000391075 66 ntBASIC1.04□□□□□ -2.24
RAF1P04049 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.04□□□□□ -2.24
RAF1P04049 MIR1185-1-201ENST00000408598 86 ntBASIC1.04□□□□□ -2.24
RAF1P04049 AL035398.1-201ENST00000430869 322 ntBASIC1.04□□□□□ -2.24
RAF1P04049 RNU7-73P-201ENST00000458743 63 ntBASIC1.04□□□□□ -2.24
RAF1P04049 RNU2-11P-201ENST00000459191 187 ntBASIC1.04□□□□□ -2.24
RAF1P04049 snoU13.16-201ENST00000459350 104 ntBASIC1.04□□□□□ -2.24
RAF1P04049 RNU6-1212P-201ENST00000517023 104 ntBASIC1.04□□□□□ -2.24
RAF1P04049 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
RAF1P04049 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
RAF1P04049 Y_RNA.778-201ENST00000620203 90 ntBASIC1.04□□□□□ -2.24
RAF1P04049 PVT1_3.1-201ENST00000620853 95 ntBASIC1.04□□□□□ -2.24
RAF1P04049 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
RAF1P04049 Y_RNA.170-201ENST00000363746 110 ntBASIC1.03□□□□□ -2.24
RAF1P04049 MIR548J-201ENST00000408833 112 ntBASIC1.03□□□□□ -2.24
RAF1P04049 MRPL35P3-201ENST00000421557 364 ntBASIC1.03□□□□□ -2.24
RAF1P04049 AL392103.1-201ENST00000447000 198 ntBASIC1.03□□□□□ -2.24
RAF1P04049 RNU6-255P-201ENST00000516957 105 ntBASIC1.03□□□□□ -2.24
RAF1P04049 AC131055.1-201ENST00000584626 316 ntBASIC1.03□□□□□ -2.24
RAF1P04049 AC091932.4-201ENST00000623386 200 ntBASIC1.03□□□□□ -2.24
RAF1P04049 MIR103A2-201ENST00000362154 78 ntBASIC1.02□□□□□ -2.25
RAF1P04049 Y_RNA.251-201ENST00000364551 99 ntBASIC1.02□□□□□ -2.25
RAF1P04049 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
RAF1P04049 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
RAF1P04049 RNU7-80P-201ENST00000459562 61 ntBASIC1.02□□□□□ -2.25
RAF1P04049 RNU7-53P-201ENST00000516705 60 ntBASIC1.02□□□□□ -2.25
RAF1P04049 RNU2-60P-201ENST00000517290 128 ntBASIC1.02□□□□□ -2.25
RAF1P04049 AC112693.2-201ENST00000556538 232 ntBASIC1.02□□□□□ -2.25
RAF1P04049 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
RAF1P04049 SNORA75.2-201ENST00000391138 150 ntBASIC1.01□□□□□ -2.25
RAF1P04049 SNORA75.3-201ENST00000391231 150 ntBASIC1.01□□□□□ -2.25
RAF1P04049 RNU6-1190P-201ENST00000410811 104 ntBASIC1.01□□□□□ -2.25
RAF1P04049 AC090844.1-201ENST00000422019 156 ntBASIC1.01□□□□□ -2.25
RAF1P04049 RNU7-197P-201ENST00000458836 62 ntBASIC1.01□□□□□ -2.25
RAF1P04049 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
RAF1P04049 RNA5SP236-201ENST00000516169 116 ntBASIC1.01□□□□□ -2.25
RAF1P04049 RNU6-113P-201ENST00000516653 101 ntBASIC1.01□□□□□ -2.25
RAF1P04049 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.01□□□□□ -2.25
RAF1P04049 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.01□□□□□ -2.25
RAF1P04049 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.01□□□□□ -2.25
RAF1P04049 MIR8055-201ENST00000610739 97 ntBASIC1.01□□□□□ -2.25
RAF1P04049 AL596211.1-201ENST00000569873 2277 ntBASIC1□□□□□ -2.25
RAF1P04049 Y_RNA.400-201ENST00000383963 111 ntBASIC1□□□□□ -2.25
RAF1P04049 Y_RNA.454-201ENST00000384224 113 ntBASIC1□□□□□ -2.25
RAF1P04049 AC063976.4-201ENST00000421971 163 ntBASIC1□□□□□ -2.25
RAF1P04049 HMGN1P33-201ENST00000432945 451 ntBASIC1□□□□□ -2.25
RAF1P04049 RNU7-45P-201ENST00000459460 63 ntBASIC1□□□□□ -2.25
RAF1P04049 SNORD79.1-201ENST00000516069 84 ntBASIC1□□□□□ -2.25
RAF1P04049 AL020996.3-201ENST00000606617 222 ntBASIC1□□□□□ -2.25
RAF1P04049 MIR302B-201ENST00000362188 73 ntBASIC0.99□□□□□ -2.25
RAF1P04049 RNU1-133P-201ENST00000364867 167 ntBASIC0.99□□□□□ -2.25
RAF1P04049 SNORA80D-201ENST00000384488 135 ntBASIC0.99□□□□□ -2.25
RAF1P04049 Y_RNA.584-201ENST00000391090 114 ntBASIC0.99□□□□□ -2.25
RAF1P04049 SNORA26.6-201ENST00000391256 115 ntBASIC0.99□□□□□ -2.25
RAF1P04049 RPS23P4-201ENST00000487908 423 ntBASIC0.99□□□□□ -2.25
RAF1P04049 RNU7-200P-201ENST00000516105 62 ntBASIC0.99□□□□□ -2.25
RAF1P04049 RNU11-2P-201ENST00000516898 142 ntBASIC0.99□□□□□ -2.25
RAF1P04049 RNU7-70P-201ENST00000516941 66 ntBASIC0.99□□□□□ -2.25
RAF1P04049 HSPE1P19-201ENST00000603327 295 ntBASIC0.99□□□□□ -2.25
RAF1P04049 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
RAF1P04049 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.99□□□□□ -2.25
RAF1P04049 MIR6516-201ENST00000630554 81 ntBASIC0.99□□□□□ -2.25
RAF1P04049 MIR6767-201ENST00000637302 66 ntBASIC0.99□□□□□ -2.25
RAF1P04049 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.99□□□□□ -2.25
RAF1P04049 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
RAF1P04049 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
RAF1P04049 RNU6-508P-201ENST00000363231 103 ntBASIC0.98□□□□□ -2.25
RAF1P04049 RNA5SP325-201ENST00000363756 130 ntBASIC0.98□□□□□ -2.25
RAF1P04049 RNU1-124P-201ENST00000363861 145 ntBASIC0.98□□□□□ -2.25
RAF1P04049 Y_RNA.215-201ENST00000364204 112 ntBASIC0.98□□□□□ -2.25
RAF1P04049 RNU6-654P-201ENST00000364373 107 ntBASIC0.98□□□□□ -2.25
RAF1P04049 RNU6-125P-201ENST00000384505 107 ntBASIC0.98□□□□□ -2.25
RAF1P04049 SNORD12-201ENST00000391002 90 ntBASIC0.98□□□□□ -2.25
RAF1P04049 RNU7-21P-201ENST00000459430 62 ntBASIC0.98□□□□□ -2.25
RAF1P04049 SNORA25.12-201ENST00000516202 82 ntBASIC0.98□□□□□ -2.25
RAF1P04049 Y_RNA.686-201ENST00000516548 134 ntBASIC0.98□□□□□ -2.25
RAF1P04049 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.98□□□□□ -2.25
RAF1P04049 MIR548X2-201ENST00000579776 100 ntBASIC0.98□□□□□ -2.25
RAF1P04049 SEPT14P17-201ENST00000617978 177 ntBASIC0.98□□□□□ -2.25
RAF1P04049 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.98□□□□□ -2.25
RAF1P04049 Z97988.1-201ENST00000637697 135 ntBASIC0.98□□□□□ -2.25
RAF1P04049 AC008163.1-202ENST00000636004 2889 ntBASIC0.98□□□□□ -2.25
RAF1P04049 Y_RNA.330-201ENST00000365230 109 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms